RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 HMGCLL1Q8TB92 370 aa8.76□□□□□ -1.01
SNORD88A-201ENST00000408314 ACTRT1Q8TDG2 376 aa8.76□□□□□ -1.01
SNORD88A-201ENST00000408314 ZNF669Q96BR6 464 aaPredicted RBP8.76□□□□□ -1.01
SNORD88A-201ENST00000408314 PPM1MQ96MI6 270 aa8.76□□□□□ -1.01
SNORD88A-201ENST00000408314 RUNDC3BQ96NL0 473 aa8.76□□□□□ -1.01
SNORD88A-201ENST00000408314 KLHL25Q9H0H3 589 aa8.76□□□□□ -1.01
SNORD88A-201ENST00000408314 GRPEL1Q9HAV7 217 aa8.76□□□□□ -1.01
SNORD88A-201ENST00000408314 MARCH4Q9P2E8 410 aaPredicted RBP8.76□□□□□ -1.01
SNORD88A-201ENST00000408314 KLHL42Q9P2K6 505 aa8.76□□□□□ -1.01
SNORD88A-201ENST00000408314 TCFL5Q9UL49 500 aa8.76□□□□□ -1.01
SNORD88A-201ENST00000408314 CDYLQ9Y232 598 aa8.76□□□□□ -1.01
SNORD88A-201ENST00000408314 PCDHGA9Q9Y5G4 932 aaKnown RBP8.76□□□□□ -1.01
SNORD88A-201ENST00000408314 CTAGE9A4FU28 777 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 TARM1B6A8C7 271 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 SMAPO00193 183 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 PEX12O00623 359 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 NDC80O14777 642 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 CCNDBP1O95273 360 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 ENO3P13929 434 aaPredicted RBP8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 PKMP14618 531 aaKnown RBP8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 TCP1P17987 556 aaKnown RBP8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 CHRM3P20309 590 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 VARSP26640 1264 aaKnown RBP8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 FOLR3P41439 243 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 DCDP81605 110 aaKnown RBP8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 TLE1Q04724 770 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 GRM7Q14831 915 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 ARHGAP19Q14CB8 494 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 PPP1R7Q15435 360 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 SF1Q15637 639 aaKnown RBP8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 TRIP13Q15645 432 aaPredicted RBP8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 ANKRD20A4Q4UJ75 823 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 ZNF789Q5FWF6 425 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 ZNF470Q6ECI4 717 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 NEPROQ6NW34 567 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 FAM199XQ6PEV8 388 aaPredicted RBP8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 FAM198BQ6UWH4 519 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 NAPRTQ6XQN6 538 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 ASB18Q6ZVZ8 466 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 NEK10Q6ZWH5 1172 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 PCGF5Q86SE9 256 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 LDB1Q86U70 411 aaPredicted RBP8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 TRIM73Q86UV7 250 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 ATCAYQ86WG3 371 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 CILP2Q8IUL8 1156 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 PPIL6Q8IXY8 311 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 KRT222Q8N1A0 295 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 ZBTB2Q8N680 514 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 LKAAEAR1Q8TD35 194 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 LPGAT1Q92604 370 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 ZUFSPQ96AP4 578 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 NACC2Q96BF6 587 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 MFSD3Q96ES6 412 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 FER1L6-AS2Q96M78 137 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 SERPINB12Q96P63 405 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 FAM167BQ9BTA0 163 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 NAT9Q9BTE0 207 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 SLC25A23Q9BV35 468 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 ZNF71Q9NQZ8 489 aaPredicted RBP8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 SPHK1Q9NYA1 384 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 EURLQ9NYK6 297 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 IL1RAPL1Q9NZN1 696 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 IFT80Q9P2H3 777 aaPredicted RBP8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 ANKMY1Q9P2S6 941 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 NXT1Q9UKK6 140 aaKnown RBP8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 PLAGL1Q9UM63 463 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 TP53TG5Q9Y2B4 290 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 ZNF451Q9Y4E5 1061 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 MYO18BQ8IUG5 2567 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 BOD1L1Q8NFC6 3051 aa8.75□□□□□ -1.01
SNORD88A-201ENST00000408314 A0A1B0GX78 115 aa8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 ARGFXA6NJG6 315 aa8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 IQCF5A8MTL0 148 aa8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 EIF3FO00303 357 aaPredicted RBP8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 PRPF4O43172 522 aaKnown RBP eCLIP8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 SRPX2O60687 465 aaPredicted RBP8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 VPS26AO75436 327 aa8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 USP1O94782 785 aa8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 IPO13O94829 963 aaKnown RBP8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 TMEM63AO94886 807 aa8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 TTC4O95801 387 aa8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 ALPPP05187 535 aa8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 ITGAXP20702 1163 aa8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 MAGP20916 626 aa8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 CMPK1P30085 196 aa8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 FMO4P31512 558 aa8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 RPS18P62269 152 aaKnown RBP8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 NFKB2Q00653 900 aa8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 IL10RAQ13651 578 aa8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 PTK6Q13882 451 aa8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 LONRF1Q17RB8 773 aa8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 DEFB110Q30KQ9 67 aa8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 FAM214AQ32MH5 1076 aa8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 PTCHD3Q3KNS1 767 aa8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 UGT3A1Q6NUS8 523 aa8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 SYDE1Q6ZW31 735 aaPredicted RBP8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 PTRH1Q86Y79 214 aaKnown RBP8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 VRK3Q8IV63 474 aa8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 SLC38A9Q8NBW4 561 aa8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 FLVCR1-AS1Q8TAF5 88 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms