RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 ZNF267Q14586 743 aaPredicted RBP7.24□□□□□ -1.25
HDAC9-202ENST00000405010 PTPRCAPQ14761 206 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 KIAA1841Q6NSI8 718 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 TBPL2Q6SJ96 375 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 C11orf65Q8NCR3 313 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 SLC22A17Q8WUG5 538 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 HMCESQ96FZ2 354 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 VMP1Q96GC9 406 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 FOPNLQ96NB1 174 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 ZNF599Q96NL3 588 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 SNX18Q96RF0 628 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 TSPAN18Q96SJ8 248 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 KLHL1Q9NR64 748 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 MARCH2Q9P0N8 246 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 MARCH4Q9P2E8 410 aaPredicted RBP7.24□□□□□ -1.25
HDAC9-202ENST00000405010 NUFIP1Q9UHK0 495 aaKnown RBP7.24□□□□□ -1.25
HDAC9-202ENST00000405010 PCDHB14Q9Y5E9 798 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 PRAMEF33A0A0G2JMD5 474 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 PRAMEF10O60809 474 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 STK16O75716 305 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 FGF4P08620 206 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 STSP08842 583 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 IRF1P10914 325 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 RPS3P23396 243 aaKnown RBP eCLIP7.24□□□□□ -1.25
HDAC9-202ENST00000405010 RECQLP46063 649 aaPredicted RBP7.24□□□□□ -1.25
HDAC9-202ENST00000405010 SNRPD2P62316 118 aaKnown RBP7.24□□□□□ -1.25
HDAC9-202ENST00000405010 ZNF33AQ06730 810 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 HSPA14Q0VDF9 509 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 CAMK2GQ13555 558 aaPredicted RBP7.24□□□□□ -1.25
HDAC9-202ENST00000405010 IQCCQ4KMZ1 466 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 SIRPB2Q5JXA9 342 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 C10orf62Q5T681 223 aaPredicted RBP7.24□□□□□ -1.25
HDAC9-202ENST00000405010 LAPTM4BQ86VI4 370 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 GALNT6Q8NCL4 622 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 PAPD5Q8NDF8 572 aaKnown RBP7.24□□□□□ -1.25
HDAC9-202ENST00000405010 OR4F6Q8NGB9 312 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 SGCDQ92629 289 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 CDKN2AIPNLQ96HQ2 116 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 NARS2Q96I59 477 aaKnown RBP7.24□□□□□ -1.25
HDAC9-202ENST00000405010 C8orf48Q96LL4 319 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 IL4I1Q96RQ9 567 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 ZSCAN5AQ9BUG6 496 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 FBXO44Q9H4M3 255 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 SLA2Q9H6Q3 261 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 MIEF1Q9NQG6 463 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 SARDHQ9UL12 918 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 CORO2BQ9UQ03 480 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 OAS3Q9Y6K5 1087 aaKnown RBP7.24□□□□□ -1.25
HDAC9-202ENST00000405010 ALS2Q96Q42 1657 aa7.24□□□□□ -1.25
HDAC9-202ENST00000405010 SOWAHBA6NEL2 793 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 CLIC1O00299 241 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 SLC30A4O14863 429 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 S1PR4O95977 384 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 DNTTP04053 509 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 SLC2A2P11168 524 aaPredicted RBP7.23□□□□□ -1.25
HDAC9-202ENST00000405010 RPS12P25398 132 aaKnown RBP7.23□□□□□ -1.25
HDAC9-202ENST00000405010 CA5AP35218 305 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 ADCYAP1R1P41586 468 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 PSMD8P48556 350 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 KANK2Q63ZY3 851 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 LINC00299Q6ZSB3 139 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 USP30Q70CQ3 517 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 NOXA1Q86UR1 476 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 TSPYL5Q86VY4 417 aaPredicted RBP7.23□□□□□ -1.25
HDAC9-202ENST00000405010 LYSMD2Q8IV50 215 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 LGI4Q8N135 537 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 DNAJB8Q8NHS0 232 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 RHEBL1Q8TAI7 183 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 TMEM203Q969S6 136 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 PTERQ96BW5 349 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 SIPA1Q96FS4 1042 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 ZFP42Q96MM3 310 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 TCF25Q9BQ70 676 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 CCDC32Q9BV29 185 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 DERL2Q9GZP9 239 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 PCDHA9Q9Y5H5 950 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 GPR45Q9Y5Y3 372 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 HSPE1-MOB4S4R3N1 261 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 DLEC1Q9Y238 1755 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 A0A1W2PRG6 482 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 FADS2P1A8MWK0 482 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 MAGEB17A8MXT2 336 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 STX16O14662 325 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 KMOO15229 486 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 CAPN15O75808 1086 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 VIPP01282 170 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 PRPS2P11908 318 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 HTR7P34969 479 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 ARSDP51689 593 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 UGT2B15P54855 530 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 NPRL3Q12980 569 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 AQP6Q13520 282 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 OR4D1Q15615 310 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 NFE2Q16621 373 aaPredicted RBP7.23□□□□□ -1.25
HDAC9-202ENST00000405010 ATAD3CQ5T2N8 411 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 IRAK1BP1Q5VVH5 260 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 BHLHB9Q6PI77 547 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 VASH1Q7L8A9 365 aaPredicted RBP7.23□□□□□ -1.25
HDAC9-202ENST00000405010 PHC2Q8IXK0 858 aa7.23□□□□□ -1.25
HDAC9-202ENST00000405010 CYP4Z2PQ8N1L4 340 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms