RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 DNAJC15Q9Y5T4 150 aa20.43■□□□□ 0.86
TPM1-208ENST00000404484 SPTBN4Q9H254 2564 aa20.43■□□□□ 0.86
TPM1-208ENST00000404484 MYO1CO00159 1063 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 OR7A17O14581 309 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 TNFRSF10CO14798 259 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 LRP3O75074 770 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 WDR47O94967 919 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 FSBPO95073 299 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 EBLN1P0CF75 366 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 ACP5P13686 325 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 NCF2P19878 526 aaPredicted RBP20.42■□□□□ 0.86
TPM1-208ENST00000404484 BDKRB1P46663 353 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 CLDN2P57739 230 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 PTCHD3Q3KNS1 767 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 CHST15Q7LFX5 561 aaPredicted RBP20.42■□□□□ 0.86
TPM1-208ENST00000404484 MILR1Q7Z6M3 343 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 OR52B6Q8NGF0 335 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 FAM174AQ8TBP5 190 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 PPP1R36Q96LQ0 422 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 PCED1AQ9H1Q7 454 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 SMOC1Q9H4F8 434 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 KLC4Q9NSK0 619 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 SUFUQ9UMX1 484 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 ZFC3H1O60293 1989 aaKnown RBP20.42■□□□□ 0.86
TPM1-208ENST00000404484 PRSS38A1L453 326 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 E9PBE3 544 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 KLHL41O60662 606 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 NDUFS2O75306 463 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 OR4F21O95013 312 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 UNC5CO95185 931 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 JUNP05412 331 aaKnown RBP20.42■□□□□ 0.86
TPM1-208ENST00000404484 IGHV4-34P06331 123 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 MPLP40238 635 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 GDF5P43026 501 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 RABIFP47224 123 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 SCTRP47872 440 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 RASSF2P50749 326 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 THOP1P52888 689 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 TRAF3Q13114 568 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 CSRP2Q16527 193 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 PLA2G2CQ5R387 149 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 AGTRAPQ6RW13 159 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 GCNT7Q6ZNI0 430 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 DCUN1D3Q8IWE4 304 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 SNX31Q8N9S9 440 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 TMEM145Q8NBT3 493 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 OR4F6Q8NGB9 312 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 OR9A1PQ8NGU1 263 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 BMFQ96LC9 184 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 OR2M4Q96R27 311 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 PKP4Q99569 1192 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 GPR174Q9BXC1 333 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 ZDHHC5Q9C0B5 715 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 STOX2Q9P2F5 926 aaPredicted RBP20.42■□□□□ 0.86
TPM1-208ENST00000404484 TRPS1Q9UHF7 1281 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 ASF1AQ9Y294 204 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 GPSM3Q9Y4H4 160 aa20.42■□□□□ 0.86
TPM1-208ENST00000404484 SLC22A2O15244 555 aa20.41■□□□□ 0.86
TPM1-208ENST00000404484 HGFP14210 728 aa20.41■□□□□ 0.86
TPM1-208ENST00000404484 PRDX3P30048 256 aaKnown RBP20.41■□□□□ 0.86
TPM1-208ENST00000404484 ADSLP30566 484 aaPredicted RBP20.41■□□□□ 0.86
TPM1-208ENST00000404484 GNPDA1P46926 289 aa20.41■□□□□ 0.86
TPM1-208ENST00000404484 FOXA1P55317 472 aa20.41■□□□□ 0.86
TPM1-208ENST00000404484 ERVPABLB-1P60509 514 aa20.41■□□□□ 0.86
TPM1-208ENST00000404484 LETMD1Q6P1Q0 360 aa20.41■□□□□ 0.86
TPM1-208ENST00000404484 DDIASQ8IXT1 998 aa20.41■□□□□ 0.86
TPM1-208ENST00000404484 METTL6Q8TCB7 284 aa20.41■□□□□ 0.86
TPM1-208ENST00000404484 TFGQ92734 400 aaPredicted RBP20.41■□□□□ 0.86
TPM1-208ENST00000404484 RAD51AP1Q96B01 352 aa20.41■□□□□ 0.86
TPM1-208ENST00000404484 CCDC106Q9BWC9 280 aa20.41■□□□□ 0.86
TPM1-208ENST00000404484 SLC29A3Q9BZD2 475 aa20.41■□□□□ 0.86
TPM1-208ENST00000404484 CARS2Q9HA77 564 aaKnown RBP20.41■□□□□ 0.86
TPM1-208ENST00000404484 FGF22Q9HCT0 170 aa20.41■□□□□ 0.86
TPM1-208ENST00000404484 TM7SF3Q9NS93 570 aa20.41■□□□□ 0.86
TPM1-208ENST00000404484 TMEM74BQ9NUR3 256 aa20.41■□□□□ 0.86
TPM1-208ENST00000404484 ZNF225Q9UK10 706 aa20.41■□□□□ 0.86
TPM1-208ENST00000404484 PIP5K1BO14986 540 aa20.4■□□□□ 0.86
TPM1-208ENST00000404484 ZNF806P0C7X5 589 aa20.4■□□□□ 0.86
TPM1-208ENST00000404484 ITPKAP23677 461 aa20.4■□□□□ 0.86
TPM1-208ENST00000404484 HMOX2P30519 316 aa20.4■□□□□ 0.86
TPM1-208ENST00000404484 IRX1P78414 480 aaPredicted RBP20.4■□□□□ 0.86
TPM1-208ENST00000404484 LYSMD4Q5XG99 296 aa20.4■□□□□ 0.86
TPM1-208ENST00000404484 ENPP7Q6UWV6 458 aa20.4■□□□□ 0.86
TPM1-208ENST00000404484 ABI3BPQ7Z7G0 1075 aa20.4■□□□□ 0.86
TPM1-208ENST00000404484 CDYL2Q8N8U2 506 aa20.4■□□□□ 0.86
TPM1-208ENST00000404484 PIGKQ92643 395 aa20.4■□□□□ 0.86
TPM1-208ENST00000404484 NSL1Q96IY1 281 aa20.4■□□□□ 0.86
TPM1-208ENST00000404484 KCNA7Q96RP8 456 aa20.4■□□□□ 0.86
TPM1-208ENST00000404484 OSGEPL1Q9H4B0 414 aa20.4■□□□□ 0.86
TPM1-208ENST00000404484 ARMCX1Q9P291 453 aa20.4■□□□□ 0.86
TPM1-208ENST00000404484 KLQ9UEF7 1012 aa20.4■□□□□ 0.86
TPM1-208ENST00000404484 CAPN7Q9Y6W3 813 aa20.4■□□□□ 0.86
TPM1-208ENST00000404484 CAPN14A8MX76 684 aa20.39■□□□□ 0.85
TPM1-208ENST00000404484 CLDN9O95484 217 aa20.39■□□□□ 0.85
TPM1-208ENST00000404484 SLC16A8O95907 504 aa20.39■□□□□ 0.85
TPM1-208ENST00000404484 FUCA1P04066 466 aa20.39■□□□□ 0.85
TPM1-208ENST00000404484 CAPN1P07384 714 aa20.39■□□□□ 0.85
TPM1-208ENST00000404484 IDSP22304 550 aa20.39■□□□□ 0.85
TPM1-208ENST00000404484 CALB2P22676 271 aa20.39■□□□□ 0.85
TPM1-208ENST00000404484 IMPA1P29218 277 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms