RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 TCTN2Q96GX1 697 aa17.38■□□□□ 0.37
HDAC11-204ENST00000404040 NLNQ9BYT8 704 aa17.38■□□□□ 0.37
HDAC11-204ENST00000404040 TREX1Q9NSU2 369 aa17.38■□□□□ 0.37
HDAC11-204ENST00000404040 SOHLH2Q9NX45 425 aa17.38■□□□□ 0.37
HDAC11-204ENST00000404040 GPR83Q9NYM4 423 aa17.38■□□□□ 0.37
HDAC11-204ENST00000404040 CFAP20Q9Y6A4 193 aaKnown RBP17.38■□□□□ 0.37
HDAC11-204ENST00000404040 CROCCQ5TZA2 2017 aa17.38■□□□□ 0.37
HDAC11-204ENST00000404040 AGAP14A8MT82 685 aa17.37■□□□□ 0.37
HDAC11-204ENST00000404040 CFAP99D6REC4 459 aa17.37■□□□□ 0.37
HDAC11-204ENST00000404040 MEN1O00255 615 aa17.37■□□□□ 0.37
HDAC11-204ENST00000404040 PFDN6O15212 129 aa17.37■□□□□ 0.37
HDAC11-204ENST00000404040 SLU7O95391 586 aaKnown RBP17.37■□□□□ 0.37
HDAC11-204ENST00000404040 RALBP11234 206 aa17.37■□□□□ 0.37
HDAC11-204ENST00000404040 KPNA2P52292 529 aaKnown RBP17.37■□□□□ 0.37
HDAC11-204ENST00000404040 DHX9Q08211 1270 aaKnown RBP17.37■□□□□ 0.37
HDAC11-204ENST00000404040 ABRQ12979 859 aa17.37■□□□□ 0.37
HDAC11-204ENST00000404040 FASTKD1Q53R41 847 aaKnown RBP17.37■□□□□ 0.37
HDAC11-204ENST00000404040 ZRANB3Q5FWF4 1079 aa17.37■□□□□ 0.37
HDAC11-204ENST00000404040 FNBP1LQ5T0N5 605 aa17.37■□□□□ 0.37
HDAC11-204ENST00000404040 TMTC4Q5T4D3 741 aa17.37■□□□□ 0.37
HDAC11-204ENST00000404040 PRAMEF17Q5VTA0 474 aa17.37■□□□□ 0.37
HDAC11-204ENST00000404040 FAM69BQ5VUD6 431 aa17.37■□□□□ 0.37
HDAC11-204ENST00000404040 KIAA0930Q6ICG6 404 aaPredicted RBP17.37■□□□□ 0.37
HDAC11-204ENST00000404040 LMNTD2Q8IXW0 634 aa17.37■□□□□ 0.37
HDAC11-204ENST00000404040 TMEM102Q8N9M5 508 aaPredicted RBP17.37■□□□□ 0.37
HDAC11-204ENST00000404040 DDHD1Q8NEL9 900 aa17.37■□□□□ 0.37
HDAC11-204ENST00000404040 OR6P1Q8NGX9 317 aa17.37■□□□□ 0.37
HDAC11-204ENST00000404040 OR4L1Q8NH43 312 aa17.37■□□□□ 0.37
HDAC11-204ENST00000404040 HDAC10Q969S8 669 aa17.37■□□□□ 0.37
HDAC11-204ENST00000404040 SMAD5Q99717 465 aaKnown RBP17.37■□□□□ 0.37
HDAC11-204ENST00000404040 EBNA1BP2Q99848 306 aaKnown RBP17.37■□□□□ 0.37
HDAC11-204ENST00000404040 SLC24A2Q9UI40 661 aa17.37■□□□□ 0.37
HDAC11-204ENST00000404040 CCDC78A2IDD5 438 aa17.36■□□□□ 0.37
HDAC11-204ENST00000404040 A6NL46 340 aa17.36■□□□□ 0.37
HDAC11-204ENST00000404040 OR2AG2A6NM03 316 aa17.36■□□□□ 0.37
HDAC11-204ENST00000404040 E7ESA3 106 aa17.36■□□□□ 0.37
HDAC11-204ENST00000404040 F8W8V4 182 aa17.36■□□□□ 0.37
HDAC11-204ENST00000404040 GAPDHSO14556 408 aaPredicted RBP17.36■□□□□ 0.37
HDAC11-204ENST00000404040 TP73O15350 636 aa17.36■□□□□ 0.37
HDAC11-204ENST00000404040 CAPN1P07384 714 aa17.36■□□□□ 0.37
HDAC11-204ENST00000404040 NMBRP28336 390 aa17.36■□□□□ 0.37
HDAC11-204ENST00000404040 PBLDP30039 288 aaPredicted RBP17.36■□□□□ 0.37
HDAC11-204ENST00000404040 CA5AP35218 305 aa17.36■□□□□ 0.37
HDAC11-204ENST00000404040 PDIA2Q13087 525 aaKnown RBP17.36■□□□□ 0.37
HDAC11-204ENST00000404040 NR6A1Q15406 480 aa17.36■□□□□ 0.37
HDAC11-204ENST00000404040 ANKRD20A4Q4UJ75 823 aa17.36■□□□□ 0.37
HDAC11-204ENST00000404040 SPANXN3Q5MJ09 141 aa17.36■□□□□ 0.37
HDAC11-204ENST00000404040 METRNLQ641Q3 311 aa17.36■□□□□ 0.37
HDAC11-204ENST00000404040 ARMC6Q6NXE6 501 aa17.36■□□□□ 0.37
HDAC11-204ENST00000404040 MED25Q71SY5 747 aa17.36■□□□□ 0.37
HDAC11-204ENST00000404040 MPP5Q8N3R9 675 aa17.36■□□□□ 0.37
HDAC11-204ENST00000404040 FBXO25Q8TCJ0 367 aa17.36■□□□□ 0.37
HDAC11-204ENST00000404040 ZNF669Q96BR6 464 aaPredicted RBP17.36■□□□□ 0.37
HDAC11-204ENST00000404040 MFSD3Q96ES6 412 aa17.36■□□□□ 0.37
HDAC11-204ENST00000404040 PPM1MQ96MI6 270 aa17.36■□□□□ 0.37
HDAC11-204ENST00000404040 WWP1Q9H0M0 922 aa17.36■□□□□ 0.37
HDAC11-204ENST00000404040 KIR3DX1Q9H7L2 352 aa17.36■□□□□ 0.37
HDAC11-204ENST00000404040 FANCEQ9HB96 536 aa17.36■□□□□ 0.37
HDAC11-204ENST00000404040 SLC2A6Q9UGQ3 507 aa17.36■□□□□ 0.37
HDAC11-204ENST00000404040 DMGDHQ9UI17 866 aaKnown RBP17.36■□□□□ 0.37
HDAC11-204ENST00000404040 DNMT3AQ9Y6K1 912 aaPredicted RBP17.36■□□□□ 0.37
HDAC11-204ENST00000404040 ESYT3A0FGR9 886 aa17.35■□□□□ 0.37
HDAC11-204ENST00000404040 CCDC162PA2VCL2 907 aa17.35■□□□□ 0.37
HDAC11-204ENST00000404040 OR6C74A6NCV1 312 aa17.35■□□□□ 0.37
HDAC11-204ENST00000404040 BHMG1C9JSJ3 638 aaPredicted RBP17.35■□□□□ 0.37
HDAC11-204ENST00000404040 GOT2P00505 430 aaKnown RBP17.35■□□□□ 0.37
HDAC11-204ENST00000404040 MSH3P20585 1137 aa17.35■□□□□ 0.37
HDAC11-204ENST00000404040 ARCN1P48444 511 aaKnown RBP17.35■□□□□ 0.37
HDAC11-204ENST00000404040 RRADP55042 308 aa17.35■□□□□ 0.37
HDAC11-204ENST00000404040 ATP1A4Q13733 1029 aa17.35■□□□□ 0.37
HDAC11-204ENST00000404040 ZNF789Q5FWF6 425 aa17.35■□□□□ 0.37
HDAC11-204ENST00000404040 TEX35Q5T0J7 233 aa17.35■□□□□ 0.37
HDAC11-204ENST00000404040 GPRC6AQ5T6X5 926 aa17.35■□□□□ 0.37
HDAC11-204ENST00000404040 MRNIPQ6NTE8 343 aa17.35■□□□□ 0.37
HDAC11-204ENST00000404040 FBXO38Q6PIJ6 1188 aa17.35■□□□□ 0.37
HDAC11-204ENST00000404040 TMEM220Q6QAJ8 160 aa17.35■□□□□ 0.37
HDAC11-204ENST00000404040 TAS2R42Q7RTR8 314 aa17.35■□□□□ 0.37
HDAC11-204ENST00000404040 SDCCAG8Q86SQ7 713 aaPredicted RBP17.35■□□□□ 0.37
HDAC11-204ENST00000404040 TICAM1Q8IUC6 712 aa17.35■□□□□ 0.37
HDAC11-204ENST00000404040 SYTL1Q8IYJ3 562 aa17.35■□□□□ 0.37
HDAC11-204ENST00000404040 IQCKQ8N0W5 287 aa17.35■□□□□ 0.37
HDAC11-204ENST00000404040 NXPE1Q8N323 547 aa17.35■□□□□ 0.37
HDAC11-204ENST00000404040 ZBTB2Q8N680 514 aa17.35■□□□□ 0.37
HDAC11-204ENST00000404040 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.35■□□□□ 0.37
HDAC11-204ENST00000404040 CALML6Q8TD86 181 aa17.35■□□□□ 0.37
HDAC11-204ENST00000404040 ZFPM2Q8WW38 1151 aa17.35■□□□□ 0.37
HDAC11-204ENST00000404040 CLIP3Q96DZ5 547 aa17.35■□□□□ 0.37
HDAC11-204ENST00000404040 C19orf60Q96EN9 201 aa17.35■□□□□ 0.37
HDAC11-204ENST00000404040 DCUN1D1Q96GG9 259 aa17.35■□□□□ 0.37
HDAC11-204ENST00000404040 C12orf66Q96MD2 445 aa17.35■□□□□ 0.37
HDAC11-204ENST00000404040 ZNF778Q96MU6 729 aa17.35■□□□□ 0.37
HDAC11-204ENST00000404040 INSM2Q96T92 566 aaPredicted RBP17.35■□□□□ 0.37
HDAC11-204ENST00000404040 COPS8Q99627 209 aa17.35■□□□□ 0.37
HDAC11-204ENST00000404040 CATSPERZQ9NTU4 200 aa17.35■□□□□ 0.37
HDAC11-204ENST00000404040 PCMTD2Q9NV79 361 aa17.35■□□□□ 0.37
HDAC11-204ENST00000404040 ZC3H7BQ9UGR2 993 aaKnown RBP17.35■□□□□ 0.37
HDAC11-204ENST00000404040 POMT2Q9UKY4 750 aa17.35■□□□□ 0.37
HDAC11-204ENST00000404040 TEX264Q9Y6I9 313 aa17.35■□□□□ 0.37
HDAC11-204ENST00000404040 FAM169AQ9Y6X4 670 aa17.35■□□□□ 0.37
HDAC11-204ENST00000404040 TRBV5-4A0A0C4DH59 114 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms