RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 GMPSP49915 693 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 KRTAP10-11P60412 298 aa4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 COASYQ13057 564 aa4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 GTF2H2Q13888 395 aa4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 ZNF234Q14588 700 aa4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 TMEM35AQ53FP2 167 aa4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 RAB6CQ53S08 254 aa4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 ZDHHC20Q5W0Z9 365 aa4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 GPR139Q6DWJ6 353 aa4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 OR7E24Q6IFN5 339 aa4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 GTF2H2CQ6P1K8 395 aa4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 INTS8Q75QN2 995 aaKnown RBP4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 LDB1Q86U70 411 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 MINDY1Q8N5J2 469 aa4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 PTPMT1Q8WUK0 201 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 SDR42E1Q8WUS8 393 aa4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 ZFAND2BQ8WV99 257 aa4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 SNX21Q969T3 373 aa4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 PRMT6Q96LA8 375 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 TTC14Q96N46 770 aa4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 NEK1Q96PY6 1258 aa4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 KRT23Q9C075 422 aa4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 RAB6CQ9H0N0 254 aa4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 SLCO5A1Q9H2Y9 848 aa4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 DDX31Q9H8H2 851 aaKnown RBP4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 UBTD1Q9HAC8 227 aa4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 MYOZ2Q9NPC6 264 aa4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 MBNL1Q9NR56 388 aaKnown RBP4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 TMOD2Q9NZR1 351 aa4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 RCC2Q9P258 522 aaKnown RBP4.77□□□□□ -1.65
HMGB3P19-201ENST00000403971 PTPRFP10586 1907 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 IGHV4OR15-8A0A075B7B6 117 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 SYNDIG1LA6NDD5 238 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 GLTPD2A6NH11 291 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 E7EWF7 191 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 TULP2O00295 520 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 ZNHIT1O43257 154 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 KCNAB3O43448 404 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 WDR1O75083 606 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 CREG1O75629 220 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 CCKBRP32239 447 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 USP8P40818 1118 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 FUT6P51993 359 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 PLIN5Q00G26 463 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 GABPAQ06546 454 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 TRDNQ13061 729 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 DOCK1Q14185 1865 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 TRNP1Q6NT89 227 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 CTR9Q6PD62 1173 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 TEX38Q6PEX7 206 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 BLOC1S2Q6QNY1 142 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 MFSD6Q6ZSS7 791 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 STOX1Q6ZVD7 989 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 RUFY3Q7L099 469 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 HAUS6Q7Z4H7 955 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 PRPF39Q86UA1 669 aaKnown RBP4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 ADIPOR2Q86V24 386 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 KMT5CQ86Y97 462 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 FOXP4Q8IVH2 680 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 FBXO39Q8N4B4 442 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 KCTD6Q8NC69 237 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 NCOA7Q8NI08 942 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 FAM151AQ8WW52 585 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 SORCS1Q8WY21 1168 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 IGSF21Q96ID5 467 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 IL17FQ96PD4 163 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 SPATC1LQ9H0A9 340 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 KCNK15Q9H427 330 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 TDRD3Q9H7E2 651 aaKnown RBP4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 CHMP1AQ9HD42 196 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 PSD3Q9NYI0 1048 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 SELENONQ9NZV5 590 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 BAZ2BQ9UIF8 2168 aaKnown RBP4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 PHIPQ8WWQ0 1821 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 TCHHQ07283 1943 aa4.76□□□□□ -1.65
HMGB3P19-201ENST00000403971 ZCWPW2A0A1B0GU75 182 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 hCG_1809904A0A1W2PP81 198 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 A0A1W2PPE2 198 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 A0A1W2PR64 198 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 OR2M5A3KFT3 312 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 C5orf60A6NFR6 353 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 A6NL46 340 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 MAGEB17A8MXT2 336 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 PRAC2D3DTV9 90 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 EIF3DO15371 548 aaKnown RBP eCLIP4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 NDUFS4O43181 175 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 FAM106CPP0CH98 169 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 FGF3P11487 239 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 CASTP20810 708 aaKnown RBP4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 CTSCP53634 463 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 EVCP57679 992 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 HAND2P61296 217 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 BAATQ14032 418 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 C15orf59Q2T9L4 293 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 LRCH2Q5VUJ6 765 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 IRAK1BP1Q5VVH5 260 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 FAM171BQ6P995 826 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 UNQ6126/PRO20091Q6UXV3 157 aa4.75□□□□□ -1.65
HMGB3P19-201ENST00000403971 DENND5BQ6ZUT9 1274 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms