RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 ZNF480Q8WV37 535 aa16.62■□□□□ 0.25
PTCHD3P3-201ENST00000403073 CAVIN3Q969G5 261 aa16.62■□□□□ 0.25
PTCHD3P3-201ENST00000403073 UBXN10Q96LJ8 280 aa16.62■□□□□ 0.25
PTCHD3P3-201ENST00000403073 CD180Q99467 661 aa16.62■□□□□ 0.25
PTCHD3P3-201ENST00000403073 CMKLR1Q99788 373 aa16.62■□□□□ 0.25
PTCHD3P3-201ENST00000403073 RAB11FIP5Q9BXF6 653 aa16.62■□□□□ 0.25
PTCHD3P3-201ENST00000403073 KLHL25Q9H0H3 589 aa16.62■□□□□ 0.25
PTCHD3P3-201ENST00000403073 OCIAD1Q9NX40 245 aa16.62■□□□□ 0.25
PTCHD3P3-201ENST00000403073 CTNNAL1Q9UBT7 734 aa16.62■□□□□ 0.25
PTCHD3P3-201ENST00000403073 ACOT9Q9Y305 439 aa16.62■□□□□ 0.25
PTCHD3P3-201ENST00000403073 COL27A1Q8IZC6 1860 aaPredicted RBP16.62■□□□□ 0.25
PTCHD3P3-201ENST00000403073 PIKFYVEQ9Y2I7 2098 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 RP1P56715 2156 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 GOLGA4Q13439 2230 aaKnown RBP16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 SLC9B1P1A6NJY1 282 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 TRIM49D1C9J1S8 452 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 PLD2O14939 933 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 TUBBP07437 444 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 HIST1H2AGP0C0S8 130 aaPredicted RBP16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 ANKRD34CP0C6C1 535 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 FGF3P11487 239 aaPredicted RBP16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 CD1DP15813 335 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 ITIH1P19827 911 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 HIST1H2ADP20671 130 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 CDH3P22223 829 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 CNTFP26441 200 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 TYK2P29597 1187 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 SERPINB8P50452 374 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 CSRP3P50461 194 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 PNLIPRP1P54315 467 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 GABREP78334 506 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 IRF9Q00978 393 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 DLG1Q12959 904 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 KIR2DS3Q14952 304 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 TSNQ15631 228 aaKnown RBP16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 LGSNQ5TDP6 509 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 SPESP1Q6UW49 350 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 SBSNQ6UWP8 590 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 MBOAT1Q6ZNC8 495 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 TAOK1Q7L7X3 1001 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 AGBL5Q8NDL9 886 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 HMGCLL1Q8TB92 370 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 KLHL6Q8WZ60 621 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 ANKRD7Q92527 254 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 PRR11Q96HE9 360 aaPredicted RBP16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 HIST1H2AHQ96KK5 128 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 CCDC138Q96M89 665 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 HIST1H2AJQ99878 128 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 H2AFJQ9BTM1 129 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 NRSN2Q9GZP1 204 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 DERL2Q9GZP9 239 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 ZNF768Q9H5H4 540 aaKnown RBP16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 POLR1BQ9H9Y6 1135 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 UTP6Q9NYH9 597 aaKnown RBP16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 AKAP7Q9P0M2 348 aaPredicted RBP16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 TLK1Q9UKI8 766 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 AK5Q9Y6K8 562 aa16.61■□□□□ 0.25
PTCHD3P3-201ENST00000403073 A0A096LPK6 155 aa16.6■□□□□ 0.25
PTCHD3P3-201ENST00000403073 A0A1W2PPV9 198 aa16.6■□□□□ 0.25
PTCHD3P3-201ENST00000403073 TLCD2A6NGC4 264 aa16.6■□□□□ 0.25
PTCHD3P3-201ENST00000403073 EFCAB7A8K855 629 aa16.6■□□□□ 0.25
PTCHD3P3-201ENST00000403073 PRICKLE3O43900 615 aaPredicted RBP16.6■□□□□ 0.25
PTCHD3P3-201ENST00000403073 KRT37O76014 449 aa16.6■□□□□ 0.25
PTCHD3P3-201ENST00000403073 GUCA1CO95843 209 aa16.6■□□□□ 0.25
PTCHD3P3-201ENST00000403073 SNRPAP09012 282 aaKnown RBP16.6■□□□□ 0.25
PTCHD3P3-201ENST00000403073 ERGP11308 486 aa16.6■□□□□ 0.25
PTCHD3P3-201ENST00000403073 PVRP15151 417 aa16.6■□□□□ 0.25
PTCHD3P3-201ENST00000403073 HSD17B2P37059 387 aa16.6■□□□□ 0.25
PTCHD3P3-201ENST00000403073 ETV5P41161 510 aa16.6■□□□□ 0.25
PTCHD3P3-201ENST00000403073 EIF3IQ13347 325 aaKnown RBP16.6■□□□□ 0.25
PTCHD3P3-201ENST00000403073 TSTA3Q13630 321 aaPredicted RBP16.6■□□□□ 0.25
PTCHD3P3-201ENST00000403073 ARHGAP19Q14CB8 494 aa16.6■□□□□ 0.25
PTCHD3P3-201ENST00000403073 SUSD1Q6UWL2 747 aa16.6■□□□□ 0.25
PTCHD3P3-201ENST00000403073 TBC1D1Q86TI0 1168 aaPredicted RBP16.6■□□□□ 0.25
PTCHD3P3-201ENST00000403073 FAM129CQ86XR2 697 aa16.6■□□□□ 0.25
PTCHD3P3-201ENST00000403073 SYTL1Q8IYJ3 562 aa16.6■□□□□ 0.25
PTCHD3P3-201ENST00000403073 OR2W6PQ8NHA6 318 aa16.6■□□□□ 0.25
PTCHD3P3-201ENST00000403073 KCTD4Q8WVF5 259 aa16.6■□□□□ 0.25
PTCHD3P3-201ENST00000403073 NXNL1Q96CM4 212 aa16.6■□□□□ 0.25
PTCHD3P3-201ENST00000403073 TRAPPC9Q96Q05 1148 aa16.6■□□□□ 0.25
PTCHD3P3-201ENST00000403073 TRIM54Q9BYV2 358 aa16.6■□□□□ 0.25
PTCHD3P3-201ENST00000403073 VPS11Q9H270 941 aa16.6■□□□□ 0.25
PTCHD3P3-201ENST00000403073 C1GALT1Q9NS00 363 aa16.6■□□□□ 0.25
PTCHD3P3-201ENST00000403073 IGSF5Q9NSI5 407 aa16.6■□□□□ 0.25
PTCHD3P3-201ENST00000403073 ABCF3Q9NUQ8 709 aa16.6■□□□□ 0.25
PTCHD3P3-201ENST00000403073 ARL15Q9NXU5 204 aa16.6■□□□□ 0.25
PTCHD3P3-201ENST00000403073 SEMA5BQ9P283 1151 aa16.6■□□□□ 0.25
PTCHD3P3-201ENST00000403073 STOX2Q9P2F5 926 aaPredicted RBP16.6■□□□□ 0.25
PTCHD3P3-201ENST00000403073 PISDQ9UG56 409 aa16.6■□□□□ 0.25
PTCHD3P3-201ENST00000403073 FETUBQ9UGM5 382 aa16.6■□□□□ 0.25
PTCHD3P3-201ENST00000403073 NOVA2Q9UNW9 492 aaKnown RBP16.6■□□□□ 0.25
PTCHD3P3-201ENST00000403073 A0A087X1B8 175 aa16.59■□□□□ 0.25
PTCHD3P3-201ENST00000403073 SMIM23A6NLE4 172 aa16.59■□□□□ 0.25
PTCHD3P3-201ENST00000403073 E7ENX8 843 aa16.59■□□□□ 0.25
PTCHD3P3-201ENST00000403073 PRAMEF10O60809 474 aa16.59■□□□□ 0.25
PTCHD3P3-201ENST00000403073 TNFSF15O95150 251 aa16.59■□□□□ 0.25
PTCHD3P3-201ENST00000403073 ENO2P09104 434 aaPredicted RBP16.59■□□□□ 0.25
PTCHD3P3-201ENST00000403073 LTA4HP09960 611 aaKnown RBP16.59■□□□□ 0.25
PTCHD3P3-201ENST00000403073 JMJD7P0C870 316 aa16.59■□□□□ 0.25
PTCHD3P3-201ENST00000403073 ST6GAL1P15907 406 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms