RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 TMEM110Q86TL2 294 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 SATL1Q86VE3 508 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 HTRA1Q92743 480 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 PEX13Q92968 403 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 CLIP3Q96DZ5 547 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 ZNF641Q96N77 438 aaPredicted RBP8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 SMOC2Q9H3U7 446 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 TM9SF3Q9HD45 589 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 TBCCD1Q9NVR7 557 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 TAS2R1Q9NYW7 299 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 ACTR3BQ9P1U1 418 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 LRRC42Q9Y546 428 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 SPIN1Q9Y657 262 aaPredicted RBP8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 NOS1APO75052 506 aaPredicted RBP8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 USP2O75604 605 aaPredicted RBP8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 CD48P09326 243 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 GALK1P51570 392 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 NCBP2P52298 156 aaKnown RBP eCLIP8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 ADAM15Q13444 863 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 KHDC1Q4VXA5 237 aaKnown RBP8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 VWA5B1Q5TIE3 1220 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 CMASQ8NFW8 434 aaPredicted RBP8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 TRPM4Q8TD43 1214 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 MFSD3Q96ES6 412 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 SUSD3Q96L08 255 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 SERINC1Q9NRX5 453 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 GDAP2Q9NXN4 497 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 TMEM5Q9Y2B1 443 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 DGKBQ9Y6T7 804 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 A0A1W2PRB8 838 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 ARPC2O15144 300 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 EBLN1P0CF75 366 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 ZMYND11Q15326 602 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 ZNF630Q2M218 657 aaPredicted RBP8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 THOC7Q6I9Y2 204 aaKnown RBP8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 GOLM1Q8NBJ4 401 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 TNFAIP8L1Q8WVP5 186 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 TFAP2BQ92481 460 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 NXPE2Q96DL1 559 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 IFT27Q9BW83 186 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 VPS29Q9UBQ0 182 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 MAFFQ9ULX9 164 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 U3KQV3 271 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 RHPN2P1A8MT19 583 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 M0QX08 132 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 ACOX3O15254 700 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 KDELR3O43731 214 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 ZBTB11O95625 1053 aaPredicted RBP8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 GJB1P08034 283 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 SMPD1P17405 629 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 DEFB115Q30KQ5 88 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 INAVAQ3KP66 663 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 PLEKHG4Q58EX7 1191 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 CHRDL2Q6WN34 429 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 SAPCD2Q86UD0 394 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 PNLDC1Q8NA58 520 aaKnown RBP8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 TAMM41Q96BW9 452 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 HIST1H2AAQ96QV6 131 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 CHMP1AQ9HD42 196 aaPredicted RBP8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 SDHAF3Q9NRP4 125 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 KANTRA0A1W2PQU2 76 aa8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 FAM172BPA6NC97 362 aa8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 C2orf71A6NGG8 1288 aa8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 SOX30O94993 753 aa8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 RB1P06400 928 aa8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 ZNF20P17024 532 aa8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 OR2B6P58173 313 aa8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 GRSF1Q12849 480 aaKnown RBP eCLIP8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 HSPB3Q12988 150 aa8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 GK3PQ14409 553 aa8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 POM121L1PQ3SYA9 428 aa8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 FAM174BQ3ZCQ3 159 aa8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 GDPD4Q6W3E5 623 aa8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 CAMKVQ8NCB2 501 aa8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 GNPDA2Q8TDQ7 276 aa8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 PSMG2Q969U7 264 aa8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 LMLNQ96KR4 655 aa8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 RANBP9Q96S59 729 aa8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 PCDHB16Q9NRJ7 776 aa8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 MOCS1Q9NZB8 636 aa8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 ZNF639Q9UID6 485 aa8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 FCF1Q9Y324 198 aaKnown RBP8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 TESMINQ9Y4I5 508 aa8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 CAMTA1Q9Y6Y1 1673 aa8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 EDDM13A0A1B0GTR0 161 aa8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 H0YAE9 185 aa8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 WNT7AO00755 349 aa8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 RASGRP1O95267 797 aa8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 GJA8P48165 433 aa8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 CRTC2Q53ET0 693 aaPredicted RBP8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 SH3D19Q5HYK7 790 aa8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 MEDAGQ5VYS4 303 aa8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 LINGO2Q7L985 606 aa8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 GALNT15Q8N3T1 639 aa8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 FKBP10Q96AY3 582 aa8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 CREB3L1Q96BA8 519 aa8.18□□□□□ -1.1
SPTLC3-201ENST00000399002 RBM18Q96H35 190 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms