RNA–Protein interactions for RNA: ENST00000398842.7

CDH23-206, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 1,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-206ENST00000398842 NDE1Q9NXR1 346 aa22.54■■□□□ 1.2
CDH23-206ENST00000398842 TCRBV21S2A2A0A5A6 115 aa22.53■■□□□ 1.2
CDH23-206ENST00000398842 KLHL33A6NCF5 533 aa22.53■■□□□ 1.2
CDH23-206ENST00000398842 RGS14O43566 566 aa22.53■■□□□ 1.2
CDH23-206ENST00000398842 KRT6AP02538 564 aa22.53■■□□□ 1.2
CDH23-206ENST00000398842 KRT6BP04259 564 aa22.53■■□□□ 1.2
CDH23-206ENST00000398842 KRT6CP48668 564 aa22.53■■□□□ 1.2
CDH23-206ENST00000398842 NME5P56597 212 aa22.53■■□□□ 1.2
CDH23-206ENST00000398842 PCDH1Q08174 1060 aa22.53■■□□□ 1.2
CDH23-206ENST00000398842 ART3Q13508 389 aa22.53■■□□□ 1.2
CDH23-206ENST00000398842 KPNB1Q14974 876 aaKnown RBP22.53■■□□□ 1.2
CDH23-206ENST00000398842 PDCD4Q53EL6 469 aaKnown RBP22.53■■□□□ 1.2
CDH23-206ENST00000398842 REP15Q6BDI9 236 aa22.53■■□□□ 1.2
CDH23-206ENST00000398842 NET1Q7Z628 596 aaPredicted RBP22.53■■□□□ 1.2
CDH23-206ENST00000398842 PGAM4Q8N0Y7 254 aa22.53■■□□□ 1.2
CDH23-206ENST00000398842 SPDYE1Q8NFV5 336 aaPredicted RBP22.53■■□□□ 1.2
CDH23-206ENST00000398842 OR9A1PQ8NGU1 263 aa22.53■■□□□ 1.2
CDH23-206ENST00000398842 ZNF480Q8WV37 535 aa22.53■■□□□ 1.2
CDH23-206ENST00000398842 PPP3R2Q96LZ3 170 aa22.53■■□□□ 1.2
CDH23-206ENST00000398842 OR4K3Q96R72 315 aa22.53■■□□□ 1.2
CDH23-206ENST00000398842 APOOQ9BUR5 198 aa22.53■■□□□ 1.2
CDH23-206ENST00000398842 C1orf50Q9BV19 199 aa22.53■■□□□ 1.2
CDH23-206ENST00000398842 MRPL1Q9BYD6 325 aaKnown RBP22.53■■□□□ 1.2
CDH23-206ENST00000398842 NDRG2Q9UN36 371 aaKnown RBP22.53■■□□□ 1.2
CDH23-206ENST00000398842 SLC17A4Q9Y2C5 497 aa22.53■■□□□ 1.2
CDH23-206ENST00000398842 SLC31A1O15431 190 aa22.53■■□□□ 1.2
CDH23-206ENST00000398842 UGDHO60701 494 aa22.53■■□□□ 1.2
CDH23-206ENST00000398842 ENTPD5O75356 428 aa22.53■■□□□ 1.2
CDH23-206ENST00000398842 CEACAM5P06731 702 aa22.53■■□□□ 1.2
CDH23-206ENST00000398842 TPMTP51580 245 aa22.53■■□□□ 1.2
CDH23-206ENST00000398842 CHIT1Q13231 466 aa22.53■■□□□ 1.2
CDH23-206ENST00000398842 LRP8Q14114 963 aa22.53■■□□□ 1.2
CDH23-206ENST00000398842 SMU1Q2TAY7 513 aa22.53■■□□□ 1.2
CDH23-206ENST00000398842 AP5B1Q2VPB7 878 aa22.53■■□□□ 1.2
CDH23-206ENST00000398842 LIPJQ5W064 366 aa22.53■■□□□ 1.2
CDH23-206ENST00000398842 PPFIBP2Q8ND30 876 aa22.53■■□□□ 1.2
CDH23-206ENST00000398842 MAFAQ8NHW3 353 aaPredicted RBP22.53■■□□□ 1.2
CDH23-206ENST00000398842 MED8Q96G25 268 aa22.53■■□□□ 1.2
CDH23-206ENST00000398842 RMI1Q9H9A7 625 aa22.53■■□□□ 1.2
CDH23-206ENST00000398842 PRPF19Q9UMS4 504 aaKnown RBP22.53■■□□□ 1.2
CDH23-206ENST00000398842 SNX6Q9UNH7 406 aa22.53■■□□□ 1.2
CDH23-206ENST00000398842 NRP2O60462 931 aa22.52■■□□□ 1.2
CDH23-206ENST00000398842 IL9P15248 144 aa22.52■■□□□ 1.2
CDH23-206ENST00000398842 ACSL1P33121 698 aa22.52■■□□□ 1.2
CDH23-206ENST00000398842 DMPKQ09013 629 aa22.52■■□□□ 1.2
CDH23-206ENST00000398842 SGO1Q5FBB7 561 aa22.52■■□□□ 1.2
CDH23-206ENST00000398842 TRIM69Q86WT6 500 aa22.52■■□□□ 1.2
CDH23-206ENST00000398842 RGL4Q8IZJ4 473 aa22.52■■□□□ 1.2
CDH23-206ENST00000398842 UHRF1Q96T88 793 aaPredicted RBP22.52■■□□□ 1.2
CDH23-206ENST00000398842 WDR41Q9HAD4 459 aa22.52■■□□□ 1.2
CDH23-206ENST00000398842 SLC52A3Q9NQ40 469 aa22.52■■□□□ 1.2
CDH23-206ENST00000398842 MAN2B1O00754 1011 aa22.51■■□□□ 1.19
CDH23-206ENST00000398842 CIB2O75838 187 aa22.51■■□□□ 1.19
CDH23-206ENST00000398842 PDYNP01213 254 aa22.51■■□□□ 1.19
CDH23-206ENST00000398842 JUPP14923 745 aa22.51■■□□□ 1.19
CDH23-206ENST00000398842 HALP42357 657 aa22.51■■□□□ 1.19
CDH23-206ENST00000398842 ZFP36L2P47974 494 aaKnown RBP22.51■■□□□ 1.19
CDH23-206ENST00000398842 MTTPP55157 894 aa22.51■■□□□ 1.19
CDH23-206ENST00000398842 HMGCS1Q01581 520 aa22.51■■□□□ 1.19
CDH23-206ENST00000398842 MLF2Q15773 248 aaPredicted RBP22.51■■□□□ 1.19
CDH23-206ENST00000398842 MMEL1Q495T6 779 aa22.51■■□□□ 1.19
CDH23-206ENST00000398842 RFTN2Q52LD8 501 aaPredicted RBP22.51■■□□□ 1.19
CDH23-206ENST00000398842 BLOC1S3Q6QNY0 202 aa22.51■■□□□ 1.19
CDH23-206ENST00000398842 MAGEC3Q8TD91 643 aa22.51■■□□□ 1.19
CDH23-206ENST00000398842 TMEM45AQ9NWC5 275 aa22.51■■□□□ 1.19
CDH23-206ENST00000398842 ZIM2Q9NZV7 527 aa22.51■■□□□ 1.19
CDH23-206ENST00000398842 SERTM1A2A2V5 107 aa22.5■■□□□ 1.19
CDH23-206ENST00000398842 BBIP1A8MTZ0 92 aa22.5■■□□□ 1.19
CDH23-206ENST00000398842 E7EQ34 232 aa22.5■■□□□ 1.19
CDH23-206ENST00000398842 NR5A2O00482 541 aa22.5■■□□□ 1.19
CDH23-206ENST00000398842 CD22P20273 847 aa22.5■■□□□ 1.19
CDH23-206ENST00000398842 IRF8Q02556 426 aa22.5■■□□□ 1.19
CDH23-206ENST00000398842 TRMT5Q32P41 509 aaKnown RBP22.5■■□□□ 1.19
CDH23-206ENST00000398842 Q6ZS52 159 aa22.5■■□□□ 1.19
CDH23-206ENST00000398842 LRRC56Q8IYG6 542 aaPredicted RBP22.5■■□□□ 1.19
CDH23-206ENST00000398842 FBXW8Q8N3Y1 598 aa22.5■■□□□ 1.19
CDH23-206ENST00000398842 DENND6BQ8NEG7 585 aa22.5■■□□□ 1.19
CDH23-206ENST00000398842 TSPEARQ8WU66 669 aa22.5■■□□□ 1.19
CDH23-206ENST00000398842 SELENOMQ8WWX9 145 aa22.5■■□□□ 1.19
CDH23-206ENST00000398842 MTFMTQ96DP5 389 aaKnown RBP22.5■■□□□ 1.19
CDH23-206ENST00000398842 TEX37Q96LM6 180 aa22.5■■□□□ 1.19
CDH23-206ENST00000398842 TIMM29Q9BSF4 260 aa22.5■■□□□ 1.19
CDH23-206ENST00000398842 ITM2CQ9NQX7 267 aa22.5■■□□□ 1.19
CDH23-206ENST00000398842 ASF1AQ9Y294 204 aa22.5■■□□□ 1.19
CDH23-206ENST00000398842 PDE5AO76074 875 aa22.5■■□□□ 1.19
CDH23-206ENST00000398842 HOXC4P09017 264 aaPredicted RBP22.5■■□□□ 1.19
CDH23-206ENST00000398842 CAPN3P20807 821 aa22.5■■□□□ 1.19
CDH23-206ENST00000398842 DPP6P42658 865 aa22.5■■□□□ 1.19
CDH23-206ENST00000398842 UFM1P61960 85 aa22.5■■□□□ 1.19
CDH23-206ENST00000398842 HACD2Q6Y1H2 254 aa22.5■■□□□ 1.19
CDH23-206ENST00000398842 ZNF687Q8N1G0 1237 aa22.5■■□□□ 1.19
CDH23-206ENST00000398842 OR5AR1Q8NGP9 310 aa22.5■■□□□ 1.19
CDH23-206ENST00000398842 OR2T34Q8NGX1 318 aa22.5■■□□□ 1.19
CDH23-206ENST00000398842 TFGQ92734 400 aaPredicted RBP22.5■■□□□ 1.19
CDH23-206ENST00000398842 SCARF2Q96GP6 870 aaPredicted RBP22.5■■□□□ 1.19
CDH23-206ENST00000398842 SLC45A3Q96JT2 553 aa22.5■■□□□ 1.19
CDH23-206ENST00000398842 MYOCQ99972 504 aa22.5■■□□□ 1.19
CDH23-206ENST00000398842 SGPP1Q9BX95 441 aa22.5■■□□□ 1.19
CDH23-206ENST00000398842 ACPTQ9BZG2 426 aa22.5■■□□□ 1.19
CDH23-206ENST00000398842 ELOVL6Q9H5J4 265 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms