RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 ELMO1Q92556 727 aa11.57□□□□□ -0.56
TFF3-202ENST00000398431 PANX2Q96RD6 677 aa11.57□□□□□ -0.56
TFF3-202ENST00000398431 FERMT1Q9BQL6 677 aa11.57□□□□□ -0.56
TFF3-202ENST00000398431 ILKAPQ9H0C8 392 aaPredicted RBP11.57□□□□□ -0.56
TFF3-202ENST00000398431 SLC6A20Q9NP91 592 aa11.57□□□□□ -0.56
TFF3-202ENST00000398431 TXLNGQ9NUQ3 528 aa11.57□□□□□ -0.56
TFF3-202ENST00000398431 SRPK3Q9UPE1 567 aa11.57□□□□□ -0.56
TFF3-202ENST00000398431 TDRKHQ9Y2W6 561 aaKnown RBP11.57□□□□□ -0.56
TFF3-202ENST00000398431 NUP210LQ5VU65 1888 aa11.57□□□□□ -0.56
TFF3-202ENST00000398431 CCDC78A2IDD5 438 aa11.56□□□□□ -0.56
TFF3-202ENST00000398431 CCDC162PA2VCL2 907 aa11.56□□□□□ -0.56
TFF3-202ENST00000398431 ENO4A6NNW6 628 aa11.56□□□□□ -0.56
TFF3-202ENST00000398431 SOCS6O14544 535 aa11.56□□□□□ -0.56
TFF3-202ENST00000398431 OR1I1O60431 355 aa11.56□□□□□ -0.56
TFF3-202ENST00000398431 KLHL41O60662 606 aa11.56□□□□□ -0.56
TFF3-202ENST00000398431 STK10O94804 968 aaKnown RBP11.56□□□□□ -0.56
TFF3-202ENST00000398431 MAGP20916 626 aa11.56□□□□□ -0.56
TFF3-202ENST00000398431 ALAS2P22557 587 aa11.56□□□□□ -0.56
TFF3-202ENST00000398431 MMP11P24347 488 aa11.56□□□□□ -0.56
TFF3-202ENST00000398431 GDF10P55107 478 aa11.56□□□□□ -0.56
TFF3-202ENST00000398431 AIMP2Q13155 320 aaKnown RBP11.56□□□□□ -0.56
TFF3-202ENST00000398431 KIR2DS3Q14952 304 aa11.56□□□□□ -0.56
TFF3-202ENST00000398431 NKG7Q16617 165 aa11.56□□□□□ -0.56
TFF3-202ENST00000398431 FCRL6Q6DN72 434 aa11.56□□□□□ -0.56
TFF3-202ENST00000398431 KIRREL2Q6UWL6 708 aa11.56□□□□□ -0.56
TFF3-202ENST00000398431 PACS1Q6VY07 963 aa11.56□□□□□ -0.56
TFF3-202ENST00000398431 COX15Q7KZN9 410 aa11.56□□□□□ -0.56
TFF3-202ENST00000398431 TMTC1Q8IUR5 882 aa11.56□□□□□ -0.56
TFF3-202ENST00000398431 VRK3Q8IV63 474 aa11.56□□□□□ -0.56
TFF3-202ENST00000398431 TTC13Q8NBP0 860 aa11.56□□□□□ -0.56
TFF3-202ENST00000398431 ST6GALNAC3Q8NDV1 305 aa11.56□□□□□ -0.56
TFF3-202ENST00000398431 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.56□□□□□ -0.56
TFF3-202ENST00000398431 NACC2Q96BF6 587 aa11.56□□□□□ -0.56
TFF3-202ENST00000398431 PPP1R2P1Q96PQ5 205 aa11.56□□□□□ -0.56
TFF3-202ENST00000398431 SPSB2Q99619 263 aa11.56□□□□□ -0.56
TFF3-202ENST00000398431 NDC1Q9BTX1 674 aa11.56□□□□□ -0.56
TFF3-202ENST00000398431 ENAMQ9NRM1 1142 aa11.56□□□□□ -0.56
TFF3-202ENST00000398431 NOVA2Q9UNW9 492 aaKnown RBP11.56□□□□□ -0.56
TFF3-202ENST00000398431 HS3ST3B1Q9Y662 390 aa11.56□□□□□ -0.56
TFF3-202ENST00000398431 MACROD2A1Z1Q3 448 aa11.55□□□□□ -0.56
TFF3-202ENST00000398431 KIF2AO00139 706 aaPredicted RBP11.55□□□□□ -0.56
TFF3-202ENST00000398431 E2F3O00716 465 aa11.55□□□□□ -0.56
TFF3-202ENST00000398431 PRICKLE3O43900 615 aaPredicted RBP11.55□□□□□ -0.56
TFF3-202ENST00000398431 TJP3O95049 919 aa11.55□□□□□ -0.56
TFF3-202ENST00000398431 ALBP02768 609 aa11.55□□□□□ -0.56
TFF3-202ENST00000398431 FTH1P02794 183 aa11.55□□□□□ -0.56
TFF3-202ENST00000398431 MCM3P25205 808 aa11.55□□□□□ -0.56
TFF3-202ENST00000398431 PKLRP30613 574 aa11.55□□□□□ -0.56
TFF3-202ENST00000398431 CCR7P32248 378 aa11.55□□□□□ -0.56
TFF3-202ENST00000398431 GRIA3P42263 894 aa11.55□□□□□ -0.56
TFF3-202ENST00000398431 RWDD2BP57060 319 aa11.55□□□□□ -0.56
TFF3-202ENST00000398431 Q0VFX4 171 aa11.55□□□□□ -0.56
TFF3-202ENST00000398431 ELOAQ14241 798 aaKnown RBP11.55□□□□□ -0.56
TFF3-202ENST00000398431 CYP2A13Q16696 494 aa11.55□□□□□ -0.56
TFF3-202ENST00000398431 PRAMEF13Q5VWM6 474 aa11.55□□□□□ -0.56
TFF3-202ENST00000398431 TTLL10Q6ZVT0 673 aa11.55□□□□□ -0.56
TFF3-202ENST00000398431 CCDC170Q8IYT3 715 aa11.55□□□□□ -0.56
TFF3-202ENST00000398431 DTWD1Q8N5C7 304 aa11.55□□□□□ -0.56
TFF3-202ENST00000398431 C2orf73Q8N5S3 287 aaPredicted RBP11.55□□□□□ -0.56
TFF3-202ENST00000398431 FAM71DQ8N9W8 422 aa11.55□□□□□ -0.56
TFF3-202ENST00000398431 OR13J1Q8NGT2 312 aa11.55□□□□□ -0.56
TFF3-202ENST00000398431 PPP4R1Q8TF05 950 aa11.55□□□□□ -0.56
TFF3-202ENST00000398431 TM9SF4Q92544 642 aa11.55□□□□□ -0.56
TFF3-202ENST00000398431 ZNF285Q96NJ3 590 aa11.55□□□□□ -0.56
TFF3-202ENST00000398431 WDR77Q9BQA1 342 aaPredicted RBP11.55□□□□□ -0.56
TFF3-202ENST00000398431 MESP1Q9BRJ9 268 aa11.55□□□□□ -0.56
TFF3-202ENST00000398431 SLC26A1Q9H2B4 701 aa11.55□□□□□ -0.56
TFF3-202ENST00000398431 LRRC40Q9H9A6 602 aa11.55□□□□□ -0.56
TFF3-202ENST00000398431 FBXL4Q9UKA2 621 aa11.55□□□□□ -0.56
TFF3-202ENST00000398431 REXO2Q9Y3B8 237 aaKnown RBP11.55□□□□□ -0.56
TFF3-202ENST00000398431 SVILO95425 2214 aa11.55□□□□□ -0.56
TFF3-202ENST00000398431 VSTM2BA6NLU5 285 aa11.54□□□□□ -0.56
TFF3-202ENST00000398431 QSOX1O00391 747 aa11.54□□□□□ -0.56
TFF3-202ENST00000398431 GPC4O75487 556 aa11.54□□□□□ -0.56
TFF3-202ENST00000398431 KLHL18O94889 574 aa11.54□□□□□ -0.56
TFF3-202ENST00000398431 MED26O95402 600 aa11.54□□□□□ -0.56
TFF3-202ENST00000398431 TUBB4AP04350 444 aa11.54□□□□□ -0.56
TFF3-202ENST00000398431 CD9P21926 228 aa11.54□□□□□ -0.56
TFF3-202ENST00000398431 ITGA3P26006 1051 aa11.54□□□□□ -0.56
TFF3-202ENST00000398431 RAB28P51157 221 aa11.54□□□□□ -0.56
TFF3-202ENST00000398431 ARSFP54793 590 aa11.54□□□□□ -0.56
TFF3-202ENST00000398431 CSE1LP55060 971 aaKnown RBP11.54□□□□□ -0.56
TFF3-202ENST00000398431 PLOD1Q02809 727 aaPredicted RBP11.54□□□□□ -0.56
TFF3-202ENST00000398431 SEMA3AQ14563 771 aa11.54□□□□□ -0.56
TFF3-202ENST00000398431 SPA17Q15506 151 aa11.54□□□□□ -0.56
TFF3-202ENST00000398431 CCDC38Q502W7 563 aa11.54□□□□□ -0.56
TFF3-202ENST00000398431 DNAJC21Q5F1R6 531 aaKnown RBP11.54□□□□□ -0.56
TFF3-202ENST00000398431 FIGLAQ6QHK4 219 aa11.54□□□□□ -0.56
TFF3-202ENST00000398431 ARHGEF18Q6ZSZ5 1173 aa11.54□□□□□ -0.56
TFF3-202ENST00000398431 ZNF534Q76KX8 674 aa11.54□□□□□ -0.56
TFF3-202ENST00000398431 PARP9Q8IXQ6 854 aa11.54□□□□□ -0.56
TFF3-202ENST00000398431 SLC22A15Q8IZD6 547 aa11.54□□□□□ -0.56
TFF3-202ENST00000398431 LRRC57Q8N9N7 239 aa11.54□□□□□ -0.56
TFF3-202ENST00000398431 OR52K1Q8NGK4 314 aa11.54□□□□□ -0.56
TFF3-202ENST00000398431 SLC35B2Q8TB61 432 aa11.54□□□□□ -0.56
TFF3-202ENST00000398431 DNAJB14Q8TBM8 379 aa11.54□□□□□ -0.56
TFF3-202ENST00000398431 LKAAEAR1Q8TD35 194 aa11.54□□□□□ -0.56
TFF3-202ENST00000398431 GRHL3Q8TE85 626 aa11.54□□□□□ -0.56
TFF3-202ENST00000398431 HDAC10Q969S8 669 aa11.54□□□□□ -0.56
TFF3-202ENST00000398431 FKBP10Q96AY3 582 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms