RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 FAM71DQ8N9W8 422 aa9.48□□□□□ -0.89
NIFKP1-201ENST00000398317 Q8NA96 180 aa9.48□□□□□ -0.89
NIFKP1-201ENST00000398317 OR5AR1Q8NGP9 310 aa9.48□□□□□ -0.89
NIFKP1-201ENST00000398317 ALG3Q92685 438 aa9.48□□□□□ -0.89
NIFKP1-201ENST00000398317 CDKN2AIPNLQ96HQ2 116 aa9.48□□□□□ -0.89
NIFKP1-201ENST00000398317 MDFIQ99750 246 aa9.48□□□□□ -0.89
NIFKP1-201ENST00000398317 PITPNM3Q9BZ71 974 aa9.48□□□□□ -0.89
NIFKP1-201ENST00000398317 MVB12BQ9H7P6 319 aa9.48□□□□□ -0.89
NIFKP1-201ENST00000398317 VPS37BQ9H9H4 285 aa9.48□□□□□ -0.89
NIFKP1-201ENST00000398317 ARNT2Q9HBZ2 717 aa9.48□□□□□ -0.89
NIFKP1-201ENST00000398317 SYTL2Q9HCH5 934 aa9.48□□□□□ -0.89
NIFKP1-201ENST00000398317 FAM60AQ9NP50 221 aa9.48□□□□□ -0.89
NIFKP1-201ENST00000398317 NLE1Q9NVX2 485 aaPredicted RBP9.48□□□□□ -0.89
NIFKP1-201ENST00000398317 SMARCAL1Q9NZC9 954 aa9.48□□□□□ -0.89
NIFKP1-201ENST00000398317 MKL2Q9ULH7 1088 aa9.48□□□□□ -0.89
NIFKP1-201ENST00000398317 ICKQ9UPZ9 632 aa9.48□□□□□ -0.89
NIFKP1-201ENST00000398317 EFR3BQ9Y2G0 817 aa9.48□□□□□ -0.89
NIFKP1-201ENST00000398317 DIDO1Q9BTC0 2240 aaKnown RBP9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 OR51F1A6NGY5 319 aa9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 C9J4A7 227 aa9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 H7C0S8 307 aa9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 DPM1O60762 260 aa9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 SEMA7AO75326 666 aa9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 SASH3O75995 380 aa9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 TJP3O95049 919 aa9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 CTSBP07858 339 aa9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 MSL3P1P0C860 447 aa9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 RNF224P0DH78 156 aa9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 CBSLP0DN79 551 aa9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 EPB42P16452 691 aa9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 UGT2B7P16662 529 aa9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 CBSP35520 551 aa9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 CD151P48509 253 aa9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 FOXL2P58012 376 aa9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 CACNG1Q06432 222 aa9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 RPA4Q13156 261 aa9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 MRPL49Q13405 166 aaKnown RBP9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 INPP5JQ15735 1006 aaPredicted RBP9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 ZIC1Q15915 447 aa9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 MLIPQ5VWP3 458 aa9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 JMJD6Q6NYC1 403 aaPredicted RBP9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 ZNF449Q6P9G9 518 aa9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 SPESP1Q6UW49 350 aa9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 LINC00114Q6XXX2 140 aa9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 UNC5AQ6ZN44 842 aa9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 HOOK3Q86VS8 718 aa9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 KLHDC8BQ8IXV7 354 aa9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 C19orf47Q8N9M1 422 aaKnown RBP9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 STYXQ8WUJ0 223 aa9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 N4BP2L2Q92802 583 aaPredicted RBP9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 LACRTQ9GZZ8 138 aa9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 SPRTNQ9H040 489 aaPredicted RBP9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 SLAMF7Q9NQ25 335 aa9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 LUC7LQ9NQ29 371 aaKnown RBP9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 SPHK1Q9NYA1 384 aa9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 ZFATQ9P243 1243 aa9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 FEZ2Q9UHY8 353 aaPredicted RBP9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 PLAGL1Q9UM63 463 aa9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 TDRKHQ9Y2W6 561 aaKnown RBP9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 REXO2Q9Y3B8 237 aaKnown RBP9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 EPN1Q9Y6I3 576 aaPredicted RBP9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 CELSR2Q9HCU4 2923 aa9.47□□□□□ -0.89
NIFKP1-201ENST00000398317 ZGRF1Q86YA3 2104 aa9.46□□□□□ -0.89
NIFKP1-201ENST00000398317 GRID2IPA4D2P6 1211 aa9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 TCP11X1B4DZS4 312 aa9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 MASP2O00187 686 aa9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 KLF7O75840 302 aaPredicted RBP9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 OR2B3O76000 313 aa9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 ALBP02768 609 aa9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 CHRM5P08912 532 aaPredicted RBP9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 HBQ1P09105 142 aa9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 TPBGLP0DKB5 382 aa9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 AGXTP21549 392 aa9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 ACADLP28330 430 aa9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 CETN2P41208 172 aa9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 CSE1LP55060 971 aaKnown RBP9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 KYNUQ16719 465 aa9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 PARP6Q2NL67 630 aa9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 EIF2S3LQ2VIR3 472 aaKnown RBP9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 CCDC38Q502W7 563 aa9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 SLC6A19Q695T7 634 aa9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 MED25Q71SY5 747 aa9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 RAB43Q86YS6 212 aa9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 LURAP1LQ8IV03 231 aa9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 TMEM151BQ8IW70 566 aa9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 FAM20CQ8IXL6 584 aa9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 GPR135Q8IZ08 494 aa9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 TMEM102Q8N9M5 508 aaPredicted RBP9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 GLIS1Q8NBF1 620 aa9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 ACRBPQ8NEB7 543 aa9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 ELMO1Q92556 727 aa9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 LRRC45Q96CN5 670 aa9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 C19orf60Q96EN9 201 aa9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 SGSM3Q96HU1 749 aa9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 PPP1R2P1Q96PQ5 205 aa9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 ALS2CR12Q96Q35 445 aa9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 OR2A14Q96R47 310 aa9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 C19orf43Q9BQ61 176 aa9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 LRRC40Q9H9A6 602 aa9.46□□□□□ -0.9
NIFKP1-201ENST00000398317 CASS4Q9NQ75 786 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms