RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 HERVK_113P63132 956 aa18.83■□□□□ 0.6
PDLIM2-204ENST00000397760 DMWDQ09019 674 aa18.83■□□□□ 0.6
PDLIM2-204ENST00000397760 SP140Q13342 867 aa18.83■□□□□ 0.6
PDLIM2-204ENST00000397760 TPRG1LQ5T0D9 272 aa18.83■□□□□ 0.6
PDLIM2-204ENST00000397760 ERVK-6Q9BXR3 956 aa18.83■□□□□ 0.6
PDLIM2-204ENST00000397760 NUF2Q9BZD4 464 aa18.83■□□□□ 0.6
PDLIM2-204ENST00000397760 DPEP2Q9H4A9 486 aa18.83■□□□□ 0.6
PDLIM2-204ENST00000397760 PARVBQ9HBI1 364 aa18.83■□□□□ 0.6
PDLIM2-204ENST00000397760 EML4Q9HC35 981 aaKnown RBP18.83■□□□□ 0.6
PDLIM2-204ENST00000397760 PDE10AQ9Y233 779 aa18.83■□□□□ 0.6
PDLIM2-204ENST00000397760 GPSM3Q9Y4H4 160 aa18.83■□□□□ 0.6
PDLIM2-204ENST00000397760 PRSS38A1L453 326 aa18.82■□□□□ 0.6
PDLIM2-204ENST00000397760 KLHL33A6NCF5 533 aa18.82■□□□□ 0.6
PDLIM2-204ENST00000397760 AIM2O14862 343 aa18.82■□□□□ 0.6
PDLIM2-204ENST00000397760 SIX3O95343 332 aaPredicted RBP18.82■□□□□ 0.6
PDLIM2-204ENST00000397760 ENO2P09104 434 aaPredicted RBP18.82■□□□□ 0.6
PDLIM2-204ENST00000397760 ACP5P13686 325 aa18.82■□□□□ 0.6
PDLIM2-204ENST00000397760 GNPDA1P46926 289 aa18.82■□□□□ 0.6
PDLIM2-204ENST00000397760 RPIAP49247 311 aa18.82■□□□□ 0.6
PDLIM2-204ENST00000397760 THOP1P52888 689 aa18.82■□□□□ 0.6
PDLIM2-204ENST00000397760 RPL6Q02878 288 aaKnown RBP18.82■□□□□ 0.6
PDLIM2-204ENST00000397760 ZNF423Q2M1K9 1284 aa18.82■□□□□ 0.6
PDLIM2-204ENST00000397760 FBXO48Q5FWF7 155 aa18.82■□□□□ 0.6
PDLIM2-204ENST00000397760 TCHHL1Q5QJ38 904 aaPredicted RBP18.82■□□□□ 0.6
PDLIM2-204ENST00000397760 PQLC1Q8N2U9 271 aa18.82■□□□□ 0.6
PDLIM2-204ENST00000397760 OR13H1Q8NG92 308 aa18.82■□□□□ 0.6
PDLIM2-204ENST00000397760 FOPNLQ96NB1 174 aa18.82■□□□□ 0.6
PDLIM2-204ENST00000397760 GBP5Q96PP8 586 aa18.82■□□□□ 0.6
PDLIM2-204ENST00000397760 EGFL8Q99944 293 aa18.82■□□□□ 0.6
PDLIM2-204ENST00000397760 ORAI3Q9BRQ5 295 aa18.82■□□□□ 0.6
PDLIM2-204ENST00000397760 TRIM54Q9BYV2 358 aa18.82■□□□□ 0.6
PDLIM2-204ENST00000397760 LRRC14BA6NHZ5 514 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 STX16-NPEPL1H3BU86 382 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 STX16O14662 325 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 MAP3K13O43283 966 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 SUPT7LO94864 414 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 CYP2A7P20853 494 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 EEF1DP29692 281 aaKnown RBP18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 MAPK9P45984 424 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 CCR10P46092 362 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 RPA4Q13156 261 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 MAPRE2Q15555 327 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 UNC50Q53HI1 259 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 TSSK4Q6SA08 328 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 SLC36A4Q6YBV0 504 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 CHSY3Q70JA7 882 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 RPS27LQ71UM5 84 aaKnown RBP18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 RASGRP3Q8IV61 690 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 ST13P4Q8IZP2 240 aaPredicted RBP18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 PDPRQ8NCN5 879 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 AGR3Q8TD06 166 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 ZFAND2BQ8WV99 257 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 OR1E3Q8WZA6 343 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 TIMM29Q9BSF4 260 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 TRMOQ9BU70 441 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 CARS2Q9HA77 564 aaKnown RBP18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 VCANP13611 3396 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 PABPN1LA6NDY0 278 aaKnown RBP18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 TMEM221A6NGB7 291 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 M0R296 226 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 PSIP1O75475 530 aaKnown RBP18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 HIST1H2AGP0C0S8 130 aaPredicted RBP18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 HIST1H2ADP20671 130 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 CD27P26842 260 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 HOXA6P31267 233 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 AGTR2P50052 363 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 TRIP10Q15642 601 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 SFT2D3Q587I9 215 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 METRNLQ641Q3 311 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 ICA1LQ8NDH6 482 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 MCOLN3Q8TDD5 553 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 HIST1H2AHQ96KK5 128 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 HIST1H2AJQ99878 128 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 H2AFJQ9BTM1 129 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 GSTO2Q9H4Y5 243 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 AASDHPPTQ9NRN7 309 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 ARL15Q9NXU5 204 aa18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 PTBP2Q9UKA9 531 aaKnown RBP18.81■□□□□ 0.6
PDLIM2-204ENST00000397760 TNFRSF10CO14798 259 aa18.8■□□□□ 0.6
PDLIM2-204ENST00000397760 SORBS2O94875 1100 aaKnown RBP18.8■□□□□ 0.6
PDLIM2-204ENST00000397760 CAPNS1P04632 268 aa18.8■□□□□ 0.6
PDLIM2-204ENST00000397760 ANXA5P08758 320 aa18.8■□□□□ 0.6
PDLIM2-204ENST00000397760 ME2P23368 584 aa18.8■□□□□ 0.6
PDLIM2-204ENST00000397760 PEX2P28328 305 aa18.8■□□□□ 0.6
PDLIM2-204ENST00000397760 DMPKQ09013 629 aa18.8■□□□□ 0.6
PDLIM2-204ENST00000397760 ART3Q13508 389 aa18.8■□□□□ 0.6
PDLIM2-204ENST00000397760 SULT1C3Q6IMI6 304 aa18.8■□□□□ 0.6
PDLIM2-204ENST00000397760 RD3Q7Z3Z2 195 aa18.8■□□□□ 0.6
PDLIM2-204ENST00000397760 TSACCQ96A04 125 aaPredicted RBP18.8■□□□□ 0.6
PDLIM2-204ENST00000397760 ESAMQ96AP7 390 aa18.8■□□□□ 0.6
PDLIM2-204ENST00000397760 PDXPQ96GD0 296 aa18.8■□□□□ 0.6
PDLIM2-204ENST00000397760 SLC6A18Q96N87 628 aa18.8■□□□□ 0.6
PDLIM2-204ENST00000397760 OR2M4Q96R27 311 aa18.8■□□□□ 0.6
PDLIM2-204ENST00000397760 CDRT15Q96T59 188 aa18.8■□□□□ 0.6
PDLIM2-204ENST00000397760 OR52A5Q9H2C5 316 aa18.8■□□□□ 0.6
PDLIM2-204ENST00000397760 Q9H521 79 aa18.8■□□□□ 0.6
PDLIM2-204ENST00000397760 KLQ9UEF7 1012 aa18.8■□□□□ 0.6
PDLIM2-204ENST00000397760 PLEKHM1Q9Y4G2 1056 aa18.8■□□□□ 0.6
PDLIM2-204ENST00000397760 SDHDO14521 159 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms