RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 NCF1CA8MVU1 366 aaPredicted RBP18.87■□□□□ 0.61
MAP1LC3A-203ENST00000397709 G3V2L1 256 aa18.87■□□□□ 0.61
MAP1LC3A-203ENST00000397709 H3BQF6 201 aa18.87■□□□□ 0.61
MAP1LC3A-203ENST00000397709 SMIM24O75264 130 aa18.87■□□□□ 0.61
MAP1LC3A-203ENST00000397709 S100BP04271 92 aaPredicted RBP18.87■□□□□ 0.61
MAP1LC3A-203ENST00000397709 NCF1P14598 390 aaPredicted RBP18.87■□□□□ 0.61
MAP1LC3A-203ENST00000397709 GPR3P46089 330 aa18.87■□□□□ 0.61
MAP1LC3A-203ENST00000397709 HNMTP50135 292 aa18.87■□□□□ 0.61
MAP1LC3A-203ENST00000397709 PNLIPRP1P54315 467 aa18.87■□□□□ 0.61
MAP1LC3A-203ENST00000397709 EPHA4P54764 986 aa18.87■□□□□ 0.61
MAP1LC3A-203ENST00000397709 DAB2P98082 770 aa18.87■□□□□ 0.61
MAP1LC3A-203ENST00000397709 ZXDCQ2QGD7 858 aaPredicted RBP18.87■□□□□ 0.61
MAP1LC3A-203ENST00000397709 ANKS6Q68DC2 871 aa18.87■□□□□ 0.61
MAP1LC3A-203ENST00000397709 SULT1C3Q6IMI6 304 aa18.87■□□□□ 0.61
MAP1LC3A-203ENST00000397709 AGTRAPQ6RW13 159 aa18.87■□□□□ 0.61
MAP1LC3A-203ENST00000397709 ZYG11AQ6WRX3 759 aa18.87■□□□□ 0.61
MAP1LC3A-203ENST00000397709 EFL1Q7Z2Z2 1120 aaKnown RBP18.87■□□□□ 0.61
MAP1LC3A-203ENST00000397709 AMIGO1Q86WK6 493 aa18.87■□□□□ 0.61
MAP1LC3A-203ENST00000397709 LRRC56Q8IYG6 542 aaPredicted RBP18.87■□□□□ 0.61
MAP1LC3A-203ENST00000397709 TCAIMQ8N3R3 496 aa18.87■□□□□ 0.61
MAP1LC3A-203ENST00000397709 LINC01555Q8NAE3 123 aa18.87■□□□□ 0.61
MAP1LC3A-203ENST00000397709 OR2L8Q8NGY9 312 aa18.87■□□□□ 0.61
MAP1LC3A-203ENST00000397709 HMGCLL1Q8TB92 370 aa18.87■□□□□ 0.61
MAP1LC3A-203ENST00000397709 ATL1Q8WXF7 558 aa18.87■□□□□ 0.61
MAP1LC3A-203ENST00000397709 LNPEPQ9UIQ6 1025 aa18.87■□□□□ 0.61
MAP1LC3A-203ENST00000397709 MID2Q9UJV3 735 aa18.87■□□□□ 0.61
MAP1LC3A-203ENST00000397709 PTBP2Q9UKA9 531 aaKnown RBP18.87■□□□□ 0.61
MAP1LC3A-203ENST00000397709 RIF1Q5UIP0 2472 aaKnown RBP18.86■□□□□ 0.61
MAP1LC3A-203ENST00000397709 ZNF839A8K0R7 811 aa18.86■□□□□ 0.61
MAP1LC3A-203ENST00000397709 TAPBPO15533 448 aa18.86■□□□□ 0.61
MAP1LC3A-203ENST00000397709 DLX3O60479 287 aa18.86■□□□□ 0.61
MAP1LC3A-203ENST00000397709 GFAPP14136 432 aa18.86■□□□□ 0.61
MAP1LC3A-203ENST00000397709 CKMT2P17540 419 aa18.86■□□□□ 0.61
MAP1LC3A-203ENST00000397709 TAC1P20366 129 aa18.86■□□□□ 0.61
MAP1LC3A-203ENST00000397709 ATP5F1P24539 256 aaPredicted RBP18.86■□□□□ 0.61
MAP1LC3A-203ENST00000397709 HPDP32754 393 aaPredicted RBP18.86■□□□□ 0.61
MAP1LC3A-203ENST00000397709 NFKB2Q00653 900 aa18.86■□□□□ 0.61
MAP1LC3A-203ENST00000397709 PERM1Q5SV97 790 aa18.86■□□□□ 0.61
MAP1LC3A-203ENST00000397709 KLHDC8AQ8IYD2 350 aa18.86■□□□□ 0.61
MAP1LC3A-203ENST00000397709 FBXO39Q8N4B4 442 aa18.86■□□□□ 0.61
MAP1LC3A-203ENST00000397709 LMNTD1Q8N9Z9 388 aa18.86■□□□□ 0.61
MAP1LC3A-203ENST00000397709 OR4E2Q8NGC2 313 aa18.86■□□□□ 0.61
MAP1LC3A-203ENST00000397709 UBTD2Q8WUN7 234 aa18.86■□□□□ 0.61
MAP1LC3A-203ENST00000397709 SELENOSQ9BQE4 189 aa18.86■□□□□ 0.61
MAP1LC3A-203ENST00000397709 TMEM79Q9BSE2 394 aa18.86■□□□□ 0.61
MAP1LC3A-203ENST00000397709 SRMSQ9H3Y6 488 aa18.86■□□□□ 0.61
MAP1LC3A-203ENST00000397709 OR6C2Q9NZP2 312 aa18.86■□□□□ 0.61
MAP1LC3A-203ENST00000397709 COPG2Q9UBF2 871 aa18.86■□□□□ 0.61
MAP1LC3A-203ENST00000397709 FAM186AA6NE01 2351 aa18.85■□□□□ 0.61
MAP1LC3A-203ENST00000397709 CPED1A4D0V7 1026 aa18.85■□□□□ 0.61
MAP1LC3A-203ENST00000397709 A8MT66 165 aa18.85■□□□□ 0.61
MAP1LC3A-203ENST00000397709 E7ENX8 843 aa18.85■□□□□ 0.61
MAP1LC3A-203ENST00000397709 STX16-NPEPL1H3BU86 382 aa18.85■□□□□ 0.61
MAP1LC3A-203ENST00000397709 STX16O14662 325 aa18.85■□□□□ 0.61
MAP1LC3A-203ENST00000397709 DHRS4L1P0CG22 281 aa18.85■□□□□ 0.61
MAP1LC3A-203ENST00000397709 MYL2P10916 166 aa18.85■□□□□ 0.61
MAP1LC3A-203ENST00000397709 CPA3P15088 417 aa18.85■□□□□ 0.61
MAP1LC3A-203ENST00000397709 ACP1P24666 158 aa18.85■□□□□ 0.61
MAP1LC3A-203ENST00000397709 GGT5P36269 586 aa18.85■□□□□ 0.61
MAP1LC3A-203ENST00000397709 SLC6A12P48065 614 aa18.85■□□□□ 0.61
MAP1LC3A-203ENST00000397709 ALDH18A1P54886 795 aaKnown RBP18.85■□□□□ 0.61
MAP1LC3A-203ENST00000397709 OR1D5P58170 312 aa18.85■□□□□ 0.61
MAP1LC3A-203ENST00000397709 PPP2R2AP63151 447 aa18.85■□□□□ 0.61
MAP1LC3A-203ENST00000397709 TAP2Q03519 686 aa18.85■□□□□ 0.61
MAP1LC3A-203ENST00000397709 FASTKQ14296 549 aaKnown RBP18.85■□□□□ 0.61
MAP1LC3A-203ENST00000397709 SETDB1Q15047 1291 aa18.85■□□□□ 0.61
MAP1LC3A-203ENST00000397709 PFKFB4Q16877 469 aa18.85■□□□□ 0.61
MAP1LC3A-203ENST00000397709 C18orf21Q32NC0 220 aaPredicted RBP18.85■□□□□ 0.61
MAP1LC3A-203ENST00000397709 SPRED1Q7Z699 444 aa18.85■□□□□ 0.61
MAP1LC3A-203ENST00000397709 ADGRF3Q8IZF5 1079 aa18.85■□□□□ 0.61
MAP1LC3A-203ENST00000397709 PTGR2Q8N8N7 351 aaPredicted RBP18.85■□□□□ 0.61
MAP1LC3A-203ENST00000397709 CCDC63Q8NA47 563 aa18.85■□□□□ 0.61
MAP1LC3A-203ENST00000397709 PPFIBP2Q8ND30 876 aa18.85■□□□□ 0.61
MAP1LC3A-203ENST00000397709 OR56A3Q8NH54 315 aa18.85■□□□□ 0.61
MAP1LC3A-203ENST00000397709 IFI44Q8TCB0 444 aa18.85■□□□□ 0.61
MAP1LC3A-203ENST00000397709 NETO1Q8TDF5 533 aa18.85■□□□□ 0.61
MAP1LC3A-203ENST00000397709 CDC6Q99741 560 aa18.85■□□□□ 0.61
MAP1LC3A-203ENST00000397709 KCNK4Q9NYG8 393 aa18.85■□□□□ 0.61
MAP1LC3A-203ENST00000397709 WWOXQ9NZC7 414 aa18.85■□□□□ 0.61
MAP1LC3A-203ENST00000397709 OGFRQ9NZT2 677 aa18.85■□□□□ 0.61
MAP1LC3A-203ENST00000397709 GVINP1Q7Z2Y8 2422 aa18.84■□□□□ 0.61
MAP1LC3A-203ENST00000397709 IGHV1OR21-1A0A087WYE8 117 aa18.84■□□□□ 0.61
MAP1LC3A-203ENST00000397709 OR5K3A6NET4 321 aa18.84■□□□□ 0.61
MAP1LC3A-203ENST00000397709 BTN3A3O00478 584 aa18.84■□□□□ 0.61
MAP1LC3A-203ENST00000397709 IPO13O94829 963 aaKnown RBP18.84■□□□□ 0.61
MAP1LC3A-203ENST00000397709 UBXN7O94888 489 aa18.84■□□□□ 0.61
MAP1LC3A-203ENST00000397709 PROS1P07225 676 aa18.84■□□□□ 0.61
MAP1LC3A-203ENST00000397709 CAPZBP47756 277 aa18.84■□□□□ 0.61
MAP1LC3A-203ENST00000397709 TBPL1P62380 186 aa18.84■□□□□ 0.61
MAP1LC3A-203ENST00000397709 NAE1Q13564 534 aa18.84■□□□□ 0.61
MAP1LC3A-203ENST00000397709 PCLAFQ15004 111 aa18.84■□□□□ 0.61
MAP1LC3A-203ENST00000397709 SYTL1Q8IYJ3 562 aa18.84■□□□□ 0.61
MAP1LC3A-203ENST00000397709 KIAA2013Q8IYS2 634 aa18.84■□□□□ 0.61
MAP1LC3A-203ENST00000397709 ANKRD42Q8N9B4 389 aa18.84■□□□□ 0.61
MAP1LC3A-203ENST00000397709 SMPDL3AQ92484 453 aa18.84■□□□□ 0.61
MAP1LC3A-203ENST00000397709 RSC1A1Q92681 617 aa18.84■□□□□ 0.61
MAP1LC3A-203ENST00000397709 CCDC3Q9BQI4 270 aa18.84■□□□□ 0.61
MAP1LC3A-203ENST00000397709 SGPP1Q9BX95 441 aa18.84■□□□□ 0.61
MAP1LC3A-203ENST00000397709 ATG10Q9H0Y0 220 aa18.84■□□□□ 0.61
MAP1LC3A-203ENST00000397709 EPB41L1Q9H4G0 881 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms