RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 DCDC5Q6ZRR9 648 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 SCD5Q86SK9 330 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 ZFAND4Q86XD8 727 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 KIAA1958Q8N8K9 716 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 OR52K2Q8NGK3 314 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 OR4L1Q8NH43 312 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 ISG20Q96AZ6 181 aaKnown RBP5.34□□□□□ -1.55
PTPRD-205ENST00000397611 SNTG1Q9NSN8 517 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 NFKBIL1Q9UBC1 381 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-205ENST00000397611 UXTQ9UBK9 157 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-205ENST00000397611 MLXQ9UH92 298 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 CLEC4AQ9UMR7 237 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 HES2Q9Y543 173 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 GNG14A0A1W2PPG7 69 aa5.34□□□□□ -1.56
PTPRD-205ENST00000397611 RSL1D1O76021 490 aaKnown RBP5.34□□□□□ -1.56
PTPRD-205ENST00000397611 EOMESO95936 686 aa5.34□□□□□ -1.56
PTPRD-205ENST00000397611 MT-CYBP00156 380 aaPredicted RBP5.34□□□□□ -1.56
PTPRD-205ENST00000397611 LPOP22079 712 aaPredicted RBP5.34□□□□□ -1.56
PTPRD-205ENST00000397611 CST5P28325 142 aaPredicted RBP5.34□□□□□ -1.56
PTPRD-205ENST00000397611 TBX4P57082 545 aa5.34□□□□□ -1.56
PTPRD-205ENST00000397611 TWF1Q12792 350 aa5.34□□□□□ -1.56
PTPRD-205ENST00000397611 SLC13A2Q13183 592 aa5.34□□□□□ -1.56
PTPRD-205ENST00000397611 BOP1Q14137 746 aaKnown RBP5.34□□□□□ -1.56
PTPRD-205ENST00000397611 TIGD5Q53EQ6 642 aa5.34□□□□□ -1.56
PTPRD-205ENST00000397611 RBM20Q5T481 1227 aaKnown RBP5.34□□□□□ -1.56
PTPRD-205ENST00000397611 GLB1LQ6UWU2 654 aa5.34□□□□□ -1.56
PTPRD-205ENST00000397611 SLC34A3Q8N130 599 aa5.34□□□□□ -1.56
PTPRD-205ENST00000397611 CYP4Z2PQ8N1L4 340 aa5.34□□□□□ -1.56
PTPRD-205ENST00000397611 DEPDC4Q8N2C3 294 aa5.34□□□□□ -1.56
PTPRD-205ENST00000397611 CHTF18Q8WVB6 975 aa5.34□□□□□ -1.56
PTPRD-205ENST00000397611 AKAP1Q92667 903 aaKnown RBP eCLIP5.34□□□□□ -1.56
PTPRD-205ENST00000397611 MGME1Q9BQP7 344 aa5.34□□□□□ -1.56
PTPRD-205ENST00000397611 TTLL2Q9BWV7 592 aa5.34□□□□□ -1.56
PTPRD-205ENST00000397611 FBXO8Q9NRD0 319 aa5.34□□□□□ -1.56
PTPRD-205ENST00000397611 CRLS1Q9UJA2 301 aa5.34□□□□□ -1.56
PTPRD-205ENST00000397611 GSTK1Q9Y2Q3 226 aa5.34□□□□□ -1.56
PTPRD-205ENST00000397611 C2orf81A6NN90 581 aa5.34□□□□□ -1.56
PTPRD-205ENST00000397611 COX7A2P14406 83 aa5.34□□□□□ -1.56
PTPRD-205ENST00000397611 LAPTM5Q13571 262 aa5.34□□□□□ -1.56
PTPRD-205ENST00000397611 OXA1LQ15070 435 aa5.34□□□□□ -1.56
PTPRD-205ENST00000397611 NPTX1Q15818 432 aa5.34□□□□□ -1.56
PTPRD-205ENST00000397611 UBE2UQ5VVX9 321 aa5.34□□□□□ -1.56
PTPRD-205ENST00000397611 MLIPQ5VWP3 458 aa5.34□□□□□ -1.56
PTPRD-205ENST00000397611 TMPRSS11AQ6ZMR5 421 aa5.34□□□□□ -1.56
PTPRD-205ENST00000397611 SIGLEC11Q96RL6 698 aa5.34□□□□□ -1.56
PTPRD-205ENST00000397611 CINPQ9BW66 212 aaPredicted RBP5.34□□□□□ -1.56
PTPRD-205ENST00000397611 DCSTAMPQ9H295 470 aa5.34□□□□□ -1.56
PTPRD-205ENST00000397611 TTYH1Q9H313 450 aaPredicted RBP5.34□□□□□ -1.56
PTPRD-205ENST00000397611 AGO3Q9H9G7 860 aaKnown RBP5.34□□□□□ -1.56
PTPRD-205ENST00000397611 RDH14Q9HBH5 336 aa5.34□□□□□ -1.56
PTPRD-205ENST00000397611 ZFP14Q9HCL3 533 aa5.34□□□□□ -1.56
PTPRD-205ENST00000397611 NECTIN3Q9NQS3 549 aa5.34□□□□□ -1.56
PTPRD-205ENST00000397611 POLE3Q9NRF9 147 aa5.34□□□□□ -1.56
PTPRD-205ENST00000397611 TMEM30AQ9NV96 361 aa5.34□□□□□ -1.56
PTPRD-205ENST00000397611 C14orf119Q9NWQ9 140 aa5.34□□□□□ -1.56
PTPRD-205ENST00000397611 PCTPQ9UKL6 214 aa5.34□□□□□ -1.56
PTPRD-205ENST00000397611 PRRC2BQ5JSZ5 2229 aaKnown RBP5.34□□□□□ -1.56
PTPRD-205ENST00000397611 E9PAM4 449 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 DYRK3O43781 588 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 ALPLP05186 524 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 GTF2E2P29084 291 aaKnown RBP5.33□□□□□ -1.56
PTPRD-205ENST00000397611 HTR2BP41595 481 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 SPIBQ01892 262 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 PMS2P3Q13401 168 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 TBRG1Q3YBR2 411 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 LRIF1Q5T3J3 769 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 PGBD2Q6P3X8 592 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 CHMP1BQ7LBR1 199 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 PRSS48Q7RTY5 328 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 VN1R5Q7Z5H4 357 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 SPATA2LQ8IUW3 424 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-205ENST00000397611 SPATA22Q8NHS9 363 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 FBLIM1Q8WUP2 373 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 TMEM40Q8WWA1 233 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 EDEM1Q92611 657 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 ZNF486Q96H40 463 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-205ENST00000397611 SLC22A4Q9H015 551 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 TP63Q9H3D4 680 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-205ENST00000397611 NMRK2Q9NPI5 230 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 KLK14Q9P0G3 267 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 EIF3KQ9UBQ5 218 aaKnown RBP5.33□□□□□ -1.56
PTPRD-205ENST00000397611 PCDHGA11Q9Y5H2 935 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 SERTM1A2A2V5 107 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 AGAP14A8MT82 685 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 CASKO14936 926 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 RGS14O43566 566 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 XYLBO75191 536 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 TSPAN12O95859 305 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 FOSL2P15408 326 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 ACVR2AP27037 513 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 CRATP43155 626 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 POLR2JP52435 117 aaKnown RBP5.33□□□□□ -1.56
PTPRD-205ENST00000397611 MAZP56270 477 aaKnown RBP5.33□□□□□ -1.56
PTPRD-205ENST00000397611 GPR17Q13304 367 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 MAPKAPK3Q16644 382 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 WDR45BQ5MNZ6 344 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 C6orf141Q5SZD1 244 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 BICRALQ6AI39 1079 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 C11orf96Q7Z7L8 435 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 IZUMO1Q8IYV9 350 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms