RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 ARHGEF9O43307 516 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 OR7A10O76100 309 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 CYP11A1P05108 521 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 DBTP11182 482 aaKnown RBP4.92□□□□□ -1.62
SSR1-202ENST00000397511 ATF4P18848 351 aaPredicted RBP4.92□□□□□ -1.62
SSR1-202ENST00000397511 SLC6A2P23975 617 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 MC4RP32245 332 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 HTR3AP46098 478 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 DNAJB13P59910 316 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 BNC1Q01954 994 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 MGAT3Q09327 533 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 TOP3AQ13472 1001 aaPredicted RBP4.92□□□□□ -1.62
SSR1-202ENST00000397511 SERINC3Q13530 473 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 LAPTM5Q13571 262 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 MBTPS1Q14703 1052 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 CBX2Q14781 532 aaPredicted RBP4.92□□□□□ -1.62
SSR1-202ENST00000397511 PYCR3Q53H96 274 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 ESCO2Q56NI9 601 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 YIF1BQ5BJH7 314 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 RTP2Q5QGT7 225 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 C17orf99Q6UX52 265 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 ZNF438Q7Z4V0 828 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 TMCO2Q7Z6W1 182 aaPredicted RBP4.92□□□□□ -1.62
SSR1-202ENST00000397511 PLD3Q8IV08 490 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 CMTR2Q8IYT2 770 aaKnown RBP4.92□□□□□ -1.62
SSR1-202ENST00000397511 C8orf59Q8N0T1 100 aaPredicted RBP4.92□□□□□ -1.62
SSR1-202ENST00000397511 KIAA1958Q8N8K9 716 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 PSD4Q8NDX1 1056 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 OR2T11Q8NH01 316 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 MCFD2Q8NI22 146 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 LRRC20Q8TCA0 184 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 LRRC58Q96CX6 371 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 C17orf62Q9BQA9 187 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 TTYH2Q9BSA4 534 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 TBCDQ9BTW9 1192 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 ZSCAN5AQ9BUG6 496 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 CINPQ9BW66 212 aaPredicted RBP4.92□□□□□ -1.62
SSR1-202ENST00000397511 MFSD1Q9H3U5 465 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 ALG2Q9H553 416 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 ZFP14Q9HCL3 533 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 ATP13A1Q9HD20 1204 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 PRDM5Q9NQX1 630 aaPredicted RBP4.92□□□□□ -1.62
SSR1-202ENST00000397511 INTS10Q9NVR2 710 aaKnown RBP4.92□□□□□ -1.62
SSR1-202ENST00000397511 TMEM248Q9NWD8 314 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 UCKL1Q9NWZ5 548 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 TMEM181Q9P2C4 612 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 AFF4Q9UHB7 1163 aaKnown RBP4.92□□□□□ -1.62
SSR1-202ENST00000397511 ZNF225Q9UK10 706 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 CFL2Q9Y281 166 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 PCDHB5Q9Y5E4 795 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 CASP8AP2Q9UKL3 1982 aa4.92□□□□□ -1.62
SSR1-202ENST00000397511 TET1Q8NFU7 2136 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 UPK3BL1B0FP48 263 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 UPK3BL2E5RIL1 263 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 F5H5T6 163 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 H0Y858 1186 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 K7ERQ8 282 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 ARPC2O15144 300 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 KCNJ13O60928 360 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 PRKD3O94806 890 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 MAGP20916 626 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 DNAJB2P25686 324 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 HOXC13P31276 330 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 HTR6P50406 440 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 STC1P52823 247 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 KCNK10P57789 538 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 POU6F2P78424 691 aaPredicted RBP4.91□□□□□ -1.62
SSR1-202ENST00000397511 ADPRMQ3LIE5 342 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 LRRC73Q5JTD7 316 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 CATSPEREQ5SY80 951 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 ATXN7L2Q5T6C5 722 aaPredicted RBP4.91□□□□□ -1.62
SSR1-202ENST00000397511 ARMC12Q5T9G4 340 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 ANKRD34AQ69YU3 496 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 IL27RAQ6UWB1 636 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 PRSS48Q7RTY5 328 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 SYVN1Q86TM6 617 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 UBQLNLQ8IYU4 475 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 SLC22A15Q8IZD6 547 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 HS3ST5Q8IZT8 346 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 CELF2-AS1Q8N7Q2 184 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 DTX3Q8N9I9 347 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 DYNC2LI1Q8TCX1 351 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 WBP2Q969T9 261 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 MARVELD3Q96A59 401 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 LINGO1Q96FE5 620 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 RIPOR3Q96MK2 946 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 KCNN2Q9H2S1 579 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 TLR8Q9NR97 1041 aaKnown RBP4.91□□□□□ -1.62
SSR1-202ENST00000397511 PLSCR3Q9NRY6 295 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 TAS2R13Q9NYV9 303 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 IL20Q9NYY1 176 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 PDE10AQ9Y233 779 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 MED16Q9Y2X0 877 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 PCDHB9Q9Y5E1 797 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 U3KQV3 271 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 SCN4AP35499 1836 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 DOCK4Q8N1I0 1966 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 ARPC4-TTLL3A0A0A6YYG9 625 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 LOC285095A0A1B0GVY8 99 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 CCDC154A6NI56 674 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms