RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 LIME1Q9H400 295 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 DEF6Q9H4E7 631 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 ASB8Q9H765 288 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 COG4Q9H9E3 785 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 DNAJB12Q9NXW2 375 aaKnown RBP9.04□□□□□ -0.96
NEDD9-203ENST00000397378 COQ3Q9NZJ6 369 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 UVRAGQ9P2Y5 699 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 CDC23Q9UJX2 597 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 HS3ST3B1Q9Y662 390 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 FBN1P35555 2871 aaKnown RBP9.03□□□□□ -0.96
NEDD9-203ENST00000397378 NBEAL1Q6ZS30 2694 aa9.03□□□□□ -0.96
NEDD9-203ENST00000397378 LRRD1A4D1F6 860 aa9.03□□□□□ -0.96
NEDD9-203ENST00000397378 PRAMEF2O60811 474 aa9.03□□□□□ -0.96
NEDD9-203ENST00000397378 SRP72O76094 671 aaKnown RBP9.03□□□□□ -0.96
NEDD9-203ENST00000397378 PIM1P11309 404 aaPredicted RBP9.03□□□□□ -0.96
NEDD9-203ENST00000397378 ATP1B2P14415 290 aaPredicted RBP9.03□□□□□ -0.96
NEDD9-203ENST00000397378 UGT2B7P16662 529 aa9.03□□□□□ -0.96
NEDD9-203ENST00000397378 NFKB1P19838 968 aa9.03□□□□□ -0.96
NEDD9-203ENST00000397378 DNASE1P24855 282 aa9.03□□□□□ -0.96
NEDD9-203ENST00000397378 SHMT2P34897 504 aa9.03□□□□□ -0.96
NEDD9-203ENST00000397378 TNFSF10P50591 281 aa9.03□□□□□ -0.96
NEDD9-203ENST00000397378 DGKQP52824 942 aa9.03□□□□□ -0.96
NEDD9-203ENST00000397378 WASHC5Q12768 1159 aa9.03□□□□□ -0.96
NEDD9-203ENST00000397378 TUBB8Q3ZCM7 444 aa9.03□□□□□ -0.96
NEDD9-203ENST00000397378 NPNTQ6UXI9 565 aa9.03□□□□□ -0.96
NEDD9-203ENST00000397378 DNAJC22Q8N4W6 341 aa9.03□□□□□ -0.96
NEDD9-203ENST00000397378 TAB3Q8N5C8 712 aaPredicted RBP9.03□□□□□ -0.96
NEDD9-203ENST00000397378 PHC3Q8NDX5 983 aa9.03□□□□□ -0.96
NEDD9-203ENST00000397378 FLVCR1-AS1Q8TAF5 88 aa9.03□□□□□ -0.96
NEDD9-203ENST00000397378 DENND1AQ8TEH3 1009 aa9.03□□□□□ -0.96
NEDD9-203ENST00000397378 HEXDCQ8WVB3 486 aa9.03□□□□□ -0.96
NEDD9-203ENST00000397378 TFGQ92734 400 aaPredicted RBP9.03□□□□□ -0.96
NEDD9-203ENST00000397378 DLG3Q92796 817 aa9.03□□□□□ -0.96
NEDD9-203ENST00000397378 DCUN1D1Q96GG9 259 aa9.03□□□□□ -0.96
NEDD9-203ENST00000397378 OXNAD1Q96HP4 312 aaPredicted RBP9.03□□□□□ -0.96
NEDD9-203ENST00000397378 OR2A14Q96R47 310 aa9.03□□□□□ -0.96
NEDD9-203ENST00000397378 FCRL5Q96RD9 977 aa9.03□□□□□ -0.96
NEDD9-203ENST00000397378 SPSB2Q99619 263 aa9.03□□□□□ -0.96
NEDD9-203ENST00000397378 HGH1Q9BTY7 390 aa9.03□□□□□ -0.96
NEDD9-203ENST00000397378 MAK16Q9BXY0 300 aaKnown RBP9.03□□□□□ -0.96
NEDD9-203ENST00000397378 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.03□□□□□ -0.96
NEDD9-203ENST00000397378 XKR8Q9H6D3 395 aa9.03□□□□□ -0.96
NEDD9-203ENST00000397378 PLA2G3Q9NZ20 509 aa9.03□□□□□ -0.96
NEDD9-203ENST00000397378 CHMP5Q9NZZ3 219 aa9.03□□□□□ -0.96
NEDD9-203ENST00000397378 CTTNBP2NLQ9P2B4 639 aa9.03□□□□□ -0.96
NEDD9-203ENST00000397378 PLCL2Q9UPR0 1127 aa9.03□□□□□ -0.96
NEDD9-203ENST00000397378 ICKQ9UPZ9 632 aa9.03□□□□□ -0.96
NEDD9-203ENST00000397378 PLEKHA6Q9Y2H5 1048 aa9.03□□□□□ -0.96
NEDD9-203ENST00000397378 VPS13CQ709C8 3753 aa9.03□□□□□ -0.96
NEDD9-203ENST00000397378 COL6A5A8TX70 2615 aa9.02□□□□□ -0.96
NEDD9-203ENST00000397378 HCFC1P51610 2035 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 A0A0J9YY10 115 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 A0A1B0GTH6 734 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 A0A1B0GX78 115 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 C2orf81A6NN90 581 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 FAM171A2A8MVW0 826 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 CFAP99D6REC4 459 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 F10P00742 488 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 SERPING1P05155 500 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 CTSBP07858 339 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 UQCRHP07919 91 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 IGFBP2P18065 325 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 ITGAXP20702 1163 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 PDHA2P29803 388 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 NR2C2P49116 596 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 ARSFP54793 590 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 XIAPP98170 497 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 PRKG2Q13237 762 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 MPP3Q13368 585 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 PTPRCAPQ14761 206 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 TAF1AQ15573 450 aaPredicted RBP9.02□□□□□ -0.97
NEDD9-203ENST00000397378 NKG7Q16617 165 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 ZNF449Q6P9G9 518 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 UNC5AQ6ZN44 842 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 BZW1Q7L1Q6 419 aaKnown RBP9.02□□□□□ -0.97
NEDD9-203ENST00000397378 TRIM73Q86UV7 250 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 SPPL2CQ8IUH8 684 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 WFDC11Q8NEX6 87 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 OR11G2Q8NGC1 345 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 OR4K2Q8NGD2 314 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 TFB1MQ8WVM0 346 aaKnown RBP9.02□□□□□ -0.97
NEDD9-203ENST00000397378 ULK4Q96C45 1275 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 VAT1Q99536 393 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 C19orf43Q9BQ61 176 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 VPS37BQ9H9H4 285 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 LMBRD1Q9NUN5 540 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 OR6C2Q9NZP2 312 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 KCNN3Q9UGI6 736 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 FKBPLQ9UIM3 349 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 NXT1Q9UKK6 140 aaKnown RBP9.02□□□□□ -0.97
NEDD9-203ENST00000397378 PPT2Q9UMR5 302 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 NENFQ9UMX5 172 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 EDARQ9UNE0 448 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 LUC7L2Q9Y383 392 aaKnown RBP9.02□□□□□ -0.97
NEDD9-203ENST00000397378 ARL5AQ9Y689 179 aa9.02□□□□□ -0.97
NEDD9-203ENST00000397378 HEATR5BQ9P2D3 2071 aa9.01□□□□□ -0.97
NEDD9-203ENST00000397378 STAB1Q9NY15 2570 aa9.01□□□□□ -0.97
NEDD9-203ENST00000397378 IGLV3-16A0A075B6K0 115 aa9.01□□□□□ -0.97
NEDD9-203ENST00000397378 C5orf60A6NFR6 353 aa9.01□□□□□ -0.97
NEDD9-203ENST00000397378 FAM227AF5H4B4 570 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms