RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 UBXN8O00124 270 aa12.9□□□□□ -0.34
SEC13-209ENST00000397117 TNFRSF10CO14798 259 aa12.9□□□□□ -0.34
SEC13-209ENST00000397117 FFAR2O15552 330 aa12.9□□□□□ -0.34
SEC13-209ENST00000397117 IPO13O94829 963 aaKnown RBP12.9□□□□□ -0.34
SEC13-209ENST00000397117 SERPINE1P05121 402 aa12.9□□□□□ -0.34
SEC13-209ENST00000397117 C8GP07360 202 aa12.9□□□□□ -0.34
SEC13-209ENST00000397117 GRK2P25098 689 aa12.9□□□□□ -0.34
SEC13-209ENST00000397117 KCNC1P48547 511 aa12.9□□□□□ -0.34
SEC13-209ENST00000397117 GABREP78334 506 aa12.9□□□□□ -0.34
SEC13-209ENST00000397117 STX3Q13277 289 aa12.9□□□□□ -0.34
SEC13-209ENST00000397117 ARHGAP40Q5TG30 622 aa12.9□□□□□ -0.34
SEC13-209ENST00000397117 BROXQ5VW32 411 aa12.9□□□□□ -0.34
SEC13-209ENST00000397117 RGS9BPQ6ZS82 235 aa12.9□□□□□ -0.34
SEC13-209ENST00000397117 SLC22A15Q8IZD6 547 aa12.9□□□□□ -0.34
SEC13-209ENST00000397117 LILRA3Q8N6C8 439 aaPredicted RBP12.9□□□□□ -0.34
SEC13-209ENST00000397117 OR13H1Q8NG92 308 aa12.9□□□□□ -0.34
SEC13-209ENST00000397117 SNRNP27Q8WVK2 155 aaKnown RBP12.9□□□□□ -0.34
SEC13-209ENST00000397117 TTC9Q92623 222 aa12.9□□□□□ -0.34
SEC13-209ENST00000397117 PHF21BQ96EK2 531 aa12.9□□□□□ -0.34
SEC13-209ENST00000397117 SCARF2Q96GP6 870 aaPredicted RBP12.9□□□□□ -0.34
SEC13-209ENST00000397117 DEPDC7Q96QD5 511 aa12.9□□□□□ -0.34
SEC13-209ENST00000397117 ATOH8Q96SQ7 321 aa12.9□□□□□ -0.34
SEC13-209ENST00000397117 TIMM29Q9BSF4 260 aa12.9□□□□□ -0.34
SEC13-209ENST00000397117 TRIM54Q9BYV2 358 aa12.9□□□□□ -0.34
SEC13-209ENST00000397117 SEMA4CQ9C0C4 833 aa12.9□□□□□ -0.34
SEC13-209ENST00000397117 EPN3Q9H201 632 aa12.9□□□□□ -0.34
SEC13-209ENST00000397117 DPEP2Q9H4A9 486 aa12.9□□□□□ -0.34
SEC13-209ENST00000397117 POLR1BQ9H9Y6 1135 aa12.9□□□□□ -0.34
SEC13-209ENST00000397117 CARS2Q9HA77 564 aaKnown RBP12.9□□□□□ -0.34
SEC13-209ENST00000397117 FGF22Q9HCT0 170 aa12.9□□□□□ -0.34
SEC13-209ENST00000397117 ASCL3Q9NQ33 180 aa12.9□□□□□ -0.34
SEC13-209ENST00000397117 MRPL40Q9NQ50 206 aaKnown RBP12.9□□□□□ -0.34
SEC13-209ENST00000397117 CD274Q9NZQ7 290 aa12.9□□□□□ -0.34
SEC13-209ENST00000397117 PCYT1BQ9Y5K3 369 aaPredicted RBP12.9□□□□□ -0.34
SEC13-209ENST00000397117 NEMP2A6NFY4 417 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 NCF1BA6NI72 391 aaPredicted RBP12.89□□□□□ -0.35
SEC13-209ENST00000397117 CYSRT1A8MQ03 144 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 A8MT66 165 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 NCF1CA8MVU1 366 aaPredicted RBP12.89□□□□□ -0.35
SEC13-209ENST00000397117 KLF11O14901 512 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 SLC16A5O15375 505 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 KCNJ13O60928 360 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 CSO75390 466 aaKnown RBP12.89□□□□□ -0.35
SEC13-209ENST00000397117 GP1BAP07359 652 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 FGF3P11487 239 aaPredicted RBP12.89□□□□□ -0.35
SEC13-209ENST00000397117 MYF5P13349 255 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 ACP5P13686 325 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 NCF1P14598 390 aaPredicted RBP12.89□□□□□ -0.35
SEC13-209ENST00000397117 CYP2A7P20853 494 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 DNAJB13P59910 316 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 ABRQ12979 859 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 RPA4Q13156 261 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 SP140Q13342 867 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 NFE2L1Q14494 772 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 TGFBIQ15582 683 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 PFKFB4Q16877 469 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 ZNF658BQ4V348 819 aaPredicted RBP12.89□□□□□ -0.35
SEC13-209ENST00000397117 PYCR3Q53H96 274 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 CFAP157Q5JU67 520 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 IGF2-ASQ6U949 168 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 SBSNQ6UWP8 590 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 ZCCHC23Q6ZST2 131 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 UBE2R2Q712K3 238 aaPredicted RBP12.89□□□□□ -0.35
SEC13-209ENST00000397117 RD3Q7Z3Z2 195 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 FBXO39Q8N4B4 442 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 FAM181AQ8N9Y4 354 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 CFAP61Q8NHU2 1237 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 ASB11Q8WXH4 323 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 APOLD1Q96LR9 279 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 DPH1Q9BZG8 443 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 NSRP1Q9H0G5 558 aaKnown RBP12.89□□□□□ -0.35
SEC13-209ENST00000397117 PARVBQ9HBI1 364 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 KLC4Q9NSK0 619 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 UTP6Q9NYH9 597 aaKnown RBP12.89□□□□□ -0.35
SEC13-209ENST00000397117 NLGN3Q9NZ94 848 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 NUDT4Q9NZJ9 180 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 NCKIPSDQ9NZQ3 722 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 GULP1Q9UBP9 304 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 SLC23A2Q9UGH3 650 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 ADAMTS6Q9UKP5 1117 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 OARD1Q9Y530 152 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 SPTA1P02549 2419 aa12.89□□□□□ -0.35
SEC13-209ENST00000397117 SCAMP1O15126 338 aa12.88□□□□□ -0.35
SEC13-209ENST00000397117 FUCA1P04066 466 aa12.88□□□□□ -0.35
SEC13-209ENST00000397117 ENO2P09104 434 aaPredicted RBP12.88□□□□□ -0.35
SEC13-209ENST00000397117 HIST1H2AGP0C0S8 130 aaPredicted RBP12.88□□□□□ -0.35
SEC13-209ENST00000397117 HIST1H2ADP20671 130 aa12.88□□□□□ -0.35
SEC13-209ENST00000397117 MAP4P27816 1152 aaKnown RBP12.88□□□□□ -0.35
SEC13-209ENST00000397117 PDHA2P29803 388 aa12.88□□□□□ -0.35
SEC13-209ENST00000397117 SEC24CP53992 1094 aa12.88□□□□□ -0.35
SEC13-209ENST00000397117 SRP54P61011 504 aaKnown RBP12.88□□□□□ -0.35
SEC13-209ENST00000397117 NFKB2Q00653 900 aa12.88□□□□□ -0.35
SEC13-209ENST00000397117 BST1Q10588 318 aa12.88□□□□□ -0.35
SEC13-209ENST00000397117 FAM47EQ6ZV65 393 aa12.88□□□□□ -0.35
SEC13-209ENST00000397117 CPLX4Q7Z7G2 160 aa12.88□□□□□ -0.35
SEC13-209ENST00000397117 DCP2Q8IU60 420 aaKnown RBP12.88□□□□□ -0.35
SEC13-209ENST00000397117 CCNYL1Q8N7R7 359 aa12.88□□□□□ -0.35
SEC13-209ENST00000397117 PTGR2Q8N8N7 351 aaPredicted RBP12.88□□□□□ -0.35
SEC13-209ENST00000397117 MCOLN3Q8TDD5 553 aa12.88□□□□□ -0.35
SEC13-209ENST00000397117 KCNE4Q8WWG9 221 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms