RNA–Protein interactions for RNA: ENST00000396682.6

RPA3-202, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RPA3, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-202ENST00000396682 IRAK4Q9NWZ3 460 aa12.76□□□□□ -0.37
RPA3-202ENST00000396682 IMPACTQ9P2X3 320 aa12.76□□□□□ -0.37
RPA3-202ENST00000396682 CIDEBQ9UHD4 219 aa12.76□□□□□ -0.37
RPA3-202ENST00000396682 FBXL4Q9UKA2 621 aa12.76□□□□□ -0.37
RPA3-202ENST00000396682 COPG1Q9Y678 874 aaKnown RBP12.76□□□□□ -0.37
RPA3-202ENST00000396682 EPN1Q9Y6I3 576 aaPredicted RBP12.76□□□□□ -0.37
RPA3-202ENST00000396682 TCRBV7S2A1N4TA0A589 114 aa12.75□□□□□ -0.37
RPA3-202ENST00000396682 BTNL10A8MVZ5 291 aa12.75□□□□□ -0.37
RPA3-202ENST00000396682 SOCS6O14544 535 aa12.75□□□□□ -0.37
RPA3-202ENST00000396682 ZNF189O75820 626 aaPredicted RBP12.75□□□□□ -0.37
RPA3-202ENST00000396682 IPO13O94829 963 aaKnown RBP12.75□□□□□ -0.37
RPA3-202ENST00000396682 ONECUT2O95948 504 aa12.75□□□□□ -0.37
RPA3-202ENST00000396682 OR56A5P0C7T3 313 aa12.75□□□□□ -0.37
RPA3-202ENST00000396682 CCR7P32248 378 aa12.75□□□□□ -0.37
RPA3-202ENST00000396682 CYLC1P35663 651 aaPredicted RBP12.75□□□□□ -0.37
RPA3-202ENST00000396682 RAB28P51157 221 aa12.75□□□□□ -0.37
RPA3-202ENST00000396682 CSE1LP55060 971 aaKnown RBP12.75□□□□□ -0.37
RPA3-202ENST00000396682 SEMA3AQ14563 771 aa12.75□□□□□ -0.37
RPA3-202ENST00000396682 HIF1AQ16665 826 aa12.75□□□□□ -0.37
RPA3-202ENST00000396682 CYP2A13Q16696 494 aa12.75□□□□□ -0.37
RPA3-202ENST00000396682 P3H1Q32P28 736 aa12.75□□□□□ -0.37
RPA3-202ENST00000396682 CROCCQ5TZA2 2017 aa12.75□□□□□ -0.37
RPA3-202ENST00000396682 MCATQ8IVS2 390 aaKnown RBP12.75□□□□□ -0.37
RPA3-202ENST00000396682 SLC22A15Q8IZD6 547 aa12.75□□□□□ -0.37
RPA3-202ENST00000396682 ZADH2Q8N4Q0 377 aa12.75□□□□□ -0.37
RPA3-202ENST00000396682 OR52K1Q8NGK4 314 aa12.75□□□□□ -0.37
RPA3-202ENST00000396682 SLC35B2Q8TB61 432 aa12.75□□□□□ -0.37
RPA3-202ENST00000396682 LKAAEAR1Q8TD35 194 aa12.75□□□□□ -0.37
RPA3-202ENST00000396682 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.75□□□□□ -0.37
RPA3-202ENST00000396682 TM9SF4Q92544 642 aa12.75□□□□□ -0.37
RPA3-202ENST00000396682 C5orf34Q96MH7 638 aa12.75□□□□□ -0.37
RPA3-202ENST00000396682 IL17FQ96PD4 163 aa12.75□□□□□ -0.37
RPA3-202ENST00000396682 SPSB2Q99619 263 aa12.75□□□□□ -0.37
RPA3-202ENST00000396682 TMEM121Q9BTD3 319 aa12.75□□□□□ -0.37
RPA3-202ENST00000396682 LUC7LQ9NQ29 371 aaKnown RBP12.75□□□□□ -0.37
RPA3-202ENST00000396682 SLC2A6Q9UGQ3 507 aa12.75□□□□□ -0.37
RPA3-202ENST00000396682 SVILO95425 2214 aa12.74□□□□□ -0.37
RPA3-202ENST00000396682 A0A1B0GX78 115 aa12.74□□□□□ -0.37
RPA3-202ENST00000396682 E2F3O00716 465 aa12.74□□□□□ -0.37
RPA3-202ENST00000396682 KLHL41O60662 606 aa12.74□□□□□ -0.37
RPA3-202ENST00000396682 GOT2P00505 430 aaKnown RBP12.74□□□□□ -0.37
RPA3-202ENST00000396682 PTMSP20962 102 aa12.74□□□□□ -0.37
RPA3-202ENST00000396682 ALAS2P22557 587 aa12.74□□□□□ -0.37
RPA3-202ENST00000396682 MMP11P24347 488 aa12.74□□□□□ -0.37
RPA3-202ENST00000396682 MCM3P25205 808 aa12.74□□□□□ -0.37
RPA3-202ENST00000396682 ITGA3P26006 1051 aa12.74□□□□□ -0.37
RPA3-202ENST00000396682 GLRBP48167 497 aa12.74□□□□□ -0.37
RPA3-202ENST00000396682 NAP1L1P55209 391 aaKnown RBP12.74□□□□□ -0.37
RPA3-202ENST00000396682 PLOD1Q02809 727 aaPredicted RBP12.74□□□□□ -0.37
RPA3-202ENST00000396682 AIMP2Q13155 320 aaKnown RBP12.74□□□□□ -0.37
RPA3-202ENST00000396682 NKG7Q16617 165 aa12.74□□□□□ -0.37
RPA3-202ENST00000396682 FCRL6Q6DN72 434 aa12.74□□□□□ -0.37
RPA3-202ENST00000396682 KIRREL2Q6UWL6 708 aa12.74□□□□□ -0.37
RPA3-202ENST00000396682 IGFL2Q6UWQ7 119 aa12.74□□□□□ -0.37
RPA3-202ENST00000396682 TTLL10Q6ZVT0 673 aa12.74□□□□□ -0.37
RPA3-202ENST00000396682 ZNF534Q76KX8 674 aa12.74□□□□□ -0.37
RPA3-202ENST00000396682 OVCH1Q7RTY7 1134 aa12.74□□□□□ -0.37
RPA3-202ENST00000396682 TAX1BP1Q86VP1 789 aa12.74□□□□□ -0.37
RPA3-202ENST00000396682 DTWD1Q8N5C7 304 aa12.74□□□□□ -0.37
RPA3-202ENST00000396682 C2orf73Q8N5S3 287 aaPredicted RBP12.74□□□□□ -0.37
RPA3-202ENST00000396682 HDAC10Q969S8 669 aa12.74□□□□□ -0.37
RPA3-202ENST00000396682 FKBP10Q96AY3 582 aa12.74□□□□□ -0.37
RPA3-202ENST00000396682 CALR3Q96L12 384 aaKnown RBP12.74□□□□□ -0.37
RPA3-202ENST00000396682 ZNF778Q96MU6 729 aa12.74□□□□□ -0.37
RPA3-202ENST00000396682 WDR77Q9BQA1 342 aaPredicted RBP12.74□□□□□ -0.37
RPA3-202ENST00000396682 MESP1Q9BRJ9 268 aa12.74□□□□□ -0.37
RPA3-202ENST00000396682 WDR54Q9H977 334 aa12.74□□□□□ -0.37
RPA3-202ENST00000396682 PACSIN2Q9UNF0 486 aaPredicted RBP12.74□□□□□ -0.37
RPA3-202ENST00000396682 NOVA2Q9UNW9 492 aaKnown RBP12.74□□□□□ -0.37
RPA3-202ENST00000396682 HS3ST3B1Q9Y662 390 aa12.74□□□□□ -0.37
RPA3-202ENST00000396682 IQCF5A8MTL0 148 aa12.73□□□□□ -0.37
RPA3-202ENST00000396682 GPC4O75487 556 aa12.73□□□□□ -0.37
RPA3-202ENST00000396682 ALBP02768 609 aa12.73□□□□□ -0.37
RPA3-202ENST00000396682 CD9P21926 228 aa12.73□□□□□ -0.37
RPA3-202ENST00000396682 CETN2P41208 172 aa12.73□□□□□ -0.37
RPA3-202ENST00000396682 GRIA1P42261 906 aa12.73□□□□□ -0.37
RPA3-202ENST00000396682 GRIA3P42263 894 aa12.73□□□□□ -0.37
RPA3-202ENST00000396682 ACVR1Q04771 509 aa12.73□□□□□ -0.37
RPA3-202ENST00000396682 HSPA14Q0VDF9 509 aa12.73□□□□□ -0.37
RPA3-202ENST00000396682 DNAJC21Q5F1R6 531 aaKnown RBP12.73□□□□□ -0.37
RPA3-202ENST00000396682 PRAMEF13Q5VWM6 474 aa12.73□□□□□ -0.37
RPA3-202ENST00000396682 RAD9BQ6WBX8 426 aa12.73□□□□□ -0.37
RPA3-202ENST00000396682 SHISA6Q6ZSJ9 500 aa12.73□□□□□ -0.37
RPA3-202ENST00000396682 LINC00523Q86TU6 105 aa12.73□□□□□ -0.37
RPA3-202ENST00000396682 KCNMB4Q86W47 210 aa12.73□□□□□ -0.37
RPA3-202ENST00000396682 TTC13Q8NBP0 860 aa12.73□□□□□ -0.37
RPA3-202ENST00000396682 ST6GALNAC3Q8NDV1 305 aa12.73□□□□□ -0.37
RPA3-202ENST00000396682 ACRBPQ8NEB7 543 aa12.73□□□□□ -0.37
RPA3-202ENST00000396682 PPP4R1Q8TF05 950 aa12.73□□□□□ -0.37
RPA3-202ENST00000396682 DLG3Q92796 817 aa12.73□□□□□ -0.37
RPA3-202ENST00000396682 NACC2Q96BF6 587 aa12.73□□□□□ -0.37
RPA3-202ENST00000396682 ZNF285Q96NJ3 590 aa12.73□□□□□ -0.37
RPA3-202ENST00000396682 ALS2CR12Q96Q35 445 aa12.73□□□□□ -0.37
RPA3-202ENST00000396682 TRIM5Q9C035 493 aa12.73□□□□□ -0.37
RPA3-202ENST00000396682 SLC26A1Q9H2B4 701 aa12.73□□□□□ -0.37
RPA3-202ENST00000396682 ENAMQ9NRM1 1142 aa12.73□□□□□ -0.37
RPA3-202ENST00000396682 CTSFQ9UBX1 484 aa12.73□□□□□ -0.37
RPA3-202ENST00000396682 CDC23Q9UJX2 597 aa12.73□□□□□ -0.37
RPA3-202ENST00000396682 ZGRF1Q86YA3 2104 aa12.73□□□□□ -0.37
RPA3-202ENST00000396682 GOLGA6L9A6NEM1 432 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms