RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 SNRPAP09012 282 aaKnown RBP18.57■□□□□ 0.56
HOXA9-202ENST00000396345 HIST1H2AGP0C0S8 130 aaPredicted RBP18.57■□□□□ 0.56
HOXA9-202ENST00000396345 ANKRD34CP0C6C1 535 aa18.57■□□□□ 0.56
HOXA9-202ENST00000396345 SLC35E2BP0CK96 405 aa18.57■□□□□ 0.56
HOXA9-202ENST00000396345 HIST1H2ADP20671 130 aa18.57■□□□□ 0.56
HOXA9-202ENST00000396345 TYK2P29597 1187 aa18.57■□□□□ 0.56
HOXA9-202ENST00000396345 HSD17B2P37059 387 aa18.57■□□□□ 0.56
HOXA9-202ENST00000396345 ARHGAP19Q14CB8 494 aa18.57■□□□□ 0.56
HOXA9-202ENST00000396345 PHKG1Q16816 387 aa18.57■□□□□ 0.56
HOXA9-202ENST00000396345 C3orf38Q5JPI3 329 aa18.57■□□□□ 0.56
HOXA9-202ENST00000396345 CCDC91Q7Z6B0 441 aa18.57■□□□□ 0.56
HOXA9-202ENST00000396345 TAX1BP1Q86VP1 789 aa18.57■□□□□ 0.56
HOXA9-202ENST00000396345 FBXO39Q8N4B4 442 aa18.57■□□□□ 0.56
HOXA9-202ENST00000396345 AGBL5Q8NDL9 886 aa18.57■□□□□ 0.56
HOXA9-202ENST00000396345 HMGCLL1Q8TB92 370 aa18.57■□□□□ 0.56
HOXA9-202ENST00000396345 HIST1H2AHQ96KK5 128 aa18.57■□□□□ 0.56
HOXA9-202ENST00000396345 UBXN10Q96LJ8 280 aa18.57■□□□□ 0.56
HOXA9-202ENST00000396345 CCDC138Q96M89 665 aa18.57■□□□□ 0.56
HOXA9-202ENST00000396345 HIST1H2AJQ99878 128 aa18.57■□□□□ 0.56
HOXA9-202ENST00000396345 H2AFJQ9BTM1 129 aa18.57■□□□□ 0.56
HOXA9-202ENST00000396345 TRIM54Q9BYV2 358 aa18.57■□□□□ 0.56
HOXA9-202ENST00000396345 TLK1Q9UKI8 766 aa18.57■□□□□ 0.56
HOXA9-202ENST00000396345 NOVA2Q9UNW9 492 aaKnown RBP18.57■□□□□ 0.56
HOXA9-202ENST00000396345 SATB2Q9UPW6 733 aa18.57■□□□□ 0.56
HOXA9-202ENST00000396345 ACOT9Q9Y305 439 aa18.57■□□□□ 0.56
HOXA9-202ENST00000396345 AKAP13Q12802 2813 aa18.57■□□□□ 0.56
HOXA9-202ENST00000396345 ANKRD12Q6UB98 2062 aa18.56■□□□□ 0.56
HOXA9-202ENST00000396345 A0A087X1B8 175 aa18.56■□□□□ 0.56
HOXA9-202ENST00000396345 IGHV5-51A0A0C4DH38 117 aa18.56■□□□□ 0.56
HOXA9-202ENST00000396345 TRABD2BA6NFA1 517 aa18.56■□□□□ 0.56
HOXA9-202ENST00000396345 ZNF839A8K0R7 811 aa18.56■□□□□ 0.56
HOXA9-202ENST00000396345 TRIM49D1C9J1S8 452 aa18.56■□□□□ 0.56
HOXA9-202ENST00000396345 SLC16A8O95907 504 aa18.56■□□□□ 0.56
HOXA9-202ENST00000396345 ALDOAP04075 364 aaKnown RBP18.56■□□□□ 0.56
HOXA9-202ENST00000396345 C2P06681 752 aa18.56■□□□□ 0.56
HOXA9-202ENST00000396345 ENO2P09104 434 aaPredicted RBP18.56■□□□□ 0.56
HOXA9-202ENST00000396345 ERGP11308 486 aa18.56■□□□□ 0.56
HOXA9-202ENST00000396345 UGT2B7P16662 529 aa18.56■□□□□ 0.56
HOXA9-202ENST00000396345 CDH3P22223 829 aa18.56■□□□□ 0.56
HOXA9-202ENST00000396345 PEBP1P30086 187 aaKnown RBP18.56■□□□□ 0.56
HOXA9-202ENST00000396345 SLC26A3P40879 764 aa18.56■□□□□ 0.56
HOXA9-202ENST00000396345 SEPHS1P49903 392 aa18.56■□□□□ 0.56
HOXA9-202ENST00000396345 PNLIPRP1P54315 467 aa18.56■□□□□ 0.56
HOXA9-202ENST00000396345 ATP6V0D1P61421 351 aa18.56■□□□□ 0.56
HOXA9-202ENST00000396345 CSHL1Q14406 222 aa18.56■□□□□ 0.56
HOXA9-202ENST00000396345 TAF1BQ53T94 588 aaPredicted RBP18.56■□□□□ 0.56
HOXA9-202ENST00000396345 FOXR1Q6PIV2 292 aa18.56■□□□□ 0.56
HOXA9-202ENST00000396345 SPESP1Q6UW49 350 aa18.56■□□□□ 0.56
HOXA9-202ENST00000396345 TBC1D1Q86TI0 1168 aaPredicted RBP18.56■□□□□ 0.56
HOXA9-202ENST00000396345 CARFQ8N187 725 aa18.56■□□□□ 0.56
HOXA9-202ENST00000396345 ZNF480Q8WV37 535 aa18.56■□□□□ 0.56
HOXA9-202ENST00000396345 SLC22A18Q96BI1 424 aa18.56■□□□□ 0.56
HOXA9-202ENST00000396345 PPM1MQ96MI6 270 aa18.56■□□□□ 0.56
HOXA9-202ENST00000396345 CNTNAP3BQ96NU0 1288 aa18.56■□□□□ 0.56
HOXA9-202ENST00000396345 OR2A14Q96R47 310 aa18.56■□□□□ 0.56
HOXA9-202ENST00000396345 CNTNAP3Q9BZ76 1288 aa18.56■□□□□ 0.56
HOXA9-202ENST00000396345 UNKQ9C0B0 810 aaKnown RBP18.56■□□□□ 0.56
HOXA9-202ENST00000396345 NRSN2Q9GZP1 204 aa18.56■□□□□ 0.56
HOXA9-202ENST00000396345 TWSG1Q9GZX9 223 aa18.56■□□□□ 0.56
HOXA9-202ENST00000396345 ZNF768Q9H5H4 540 aaKnown RBP18.56■□□□□ 0.56
HOXA9-202ENST00000396345 POLR1BQ9H9Y6 1135 aa18.56■□□□□ 0.56
HOXA9-202ENST00000396345 C1GALT1Q9NS00 363 aa18.56■□□□□ 0.56
HOXA9-202ENST00000396345 SEMA5BQ9P283 1151 aa18.56■□□□□ 0.56
HOXA9-202ENST00000396345 PSMC3IPQ9P2W1 217 aaPredicted RBP18.56■□□□□ 0.56
HOXA9-202ENST00000396345 A0A096LPK6 155 aa18.55■□□□□ 0.56
HOXA9-202ENST00000396345 IQANK1A0A1B0GTG1 560 aa18.55■□□□□ 0.56
HOXA9-202ENST00000396345 A0A1W2PNU3 283 aaPredicted RBP18.55■□□□□ 0.56
HOXA9-202ENST00000396345 PLD2O14939 933 aa18.55■□□□□ 0.56
HOXA9-202ENST00000396345 MPOP05164 745 aa18.55■□□□□ 0.56
HOXA9-202ENST00000396345 LTA4HP09960 611 aaKnown RBP18.55■□□□□ 0.56
HOXA9-202ENST00000396345 HGFP14210 728 aa18.55■□□□□ 0.56
HOXA9-202ENST00000396345 CD1DP15813 335 aa18.55■□□□□ 0.56
HOXA9-202ENST00000396345 GMPRP36959 345 aa18.55■□□□□ 0.56
HOXA9-202ENST00000396345 LSSP48449 732 aa18.55■□□□□ 0.56
HOXA9-202ENST00000396345 CSRP3P50461 194 aa18.55■□□□□ 0.56
HOXA9-202ENST00000396345 AP1S2P56377 157 aa18.55■□□□□ 0.56
HOXA9-202ENST00000396345 GABREP78334 506 aa18.55■□□□□ 0.56
HOXA9-202ENST00000396345 FASTKQ14296 549 aaKnown RBP18.55■□□□□ 0.56
HOXA9-202ENST00000396345 TSNQ15631 228 aaKnown RBP18.55■□□□□ 0.56
HOXA9-202ENST00000396345 FBXO38Q6PIJ6 1188 aa18.55■□□□□ 0.56
HOXA9-202ENST00000396345 SBSNQ6UWP8 590 aa18.55■□□□□ 0.56
HOXA9-202ENST00000396345 MBOAT1Q6ZNC8 495 aa18.55■□□□□ 0.56
HOXA9-202ENST00000396345 ADAMTSL2Q86TH1 951 aa18.55■□□□□ 0.56
HOXA9-202ENST00000396345 SYTL1Q8IYJ3 562 aa18.55■□□□□ 0.56
HOXA9-202ENST00000396345 FLVCR1-AS1Q8TAF5 88 aa18.55■□□□□ 0.56
HOXA9-202ENST00000396345 KLHL6Q8WZ60 621 aa18.55■□□□□ 0.56
HOXA9-202ENST00000396345 SMPDL3AQ92484 453 aa18.55■□□□□ 0.56
HOXA9-202ENST00000396345 ISL2Q96A47 359 aa18.55■□□□□ 0.56
HOXA9-202ENST00000396345 MTBPQ96DY7 904 aa18.55■□□□□ 0.56
HOXA9-202ENST00000396345 PPCSQ9HAB8 311 aa18.55■□□□□ 0.56
HOXA9-202ENST00000396345 ARL15Q9NXU5 204 aa18.55■□□□□ 0.56
HOXA9-202ENST00000396345 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.55■□□□□ 0.56
HOXA9-202ENST00000396345 PMS2P1A4D2B8 440 aa18.54■□□□□ 0.56
HOXA9-202ENST00000396345 EFCAB7A8K855 629 aa18.54■□□□□ 0.56
HOXA9-202ENST00000396345 JMJD7P0C870 316 aa18.54■□□□□ 0.56
HOXA9-202ENST00000396345 NELFEP18615 380 aaKnown RBP18.54■□□□□ 0.56
HOXA9-202ENST00000396345 IMPA1P29218 277 aa18.54■□□□□ 0.56
HOXA9-202ENST00000396345 OAS2P29728 719 aaKnown RBP18.54■□□□□ 0.56
HOXA9-202ENST00000396345 MAGEA12P43365 314 aa18.54■□□□□ 0.56
HOXA9-202ENST00000396345 ARL4DP49703 201 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms