RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 TTLL10Q6ZVT0 673 aa15.77■□□□□ 0.12
DDR1-229ENST00000396342 OTOAQ7RTW8 1153 aa15.77■□□□□ 0.12
DDR1-229ENST00000396342 LRRC6Q86X45 466 aa15.77■□□□□ 0.12
DDR1-229ENST00000396342 MCATQ8IVS2 390 aaKnown RBP15.77■□□□□ 0.12
DDR1-229ENST00000396342 MPP5Q8N3R9 675 aa15.77■□□□□ 0.12
DDR1-229ENST00000396342 PRR7Q8TB68 274 aa15.77■□□□□ 0.12
DDR1-229ENST00000396342 COG1Q8WTW3 980 aa15.77■□□□□ 0.12
DDR1-229ENST00000396342 RAD51AP1Q96B01 352 aa15.77■□□□□ 0.12
DDR1-229ENST00000396342 HES6Q96HZ4 224 aa15.77■□□□□ 0.12
DDR1-229ENST00000396342 MRM3Q9HC36 420 aaKnown RBP15.77■□□□□ 0.12
DDR1-229ENST00000396342 FAM60AQ9NP50 221 aa15.77■□□□□ 0.12
DDR1-229ENST00000396342 CASS4Q9NQ75 786 aa15.77■□□□□ 0.12
DDR1-229ENST00000396342 AGPAT4Q9NRZ5 378 aa15.77■□□□□ 0.12
DDR1-229ENST00000396342 P4HTMQ9NXG6 502 aa15.77■□□□□ 0.12
DDR1-229ENST00000396342 UTP6Q9NYH9 597 aaKnown RBP15.77■□□□□ 0.12
DDR1-229ENST00000396342 DHCR7Q9UBM7 475 aaKnown RBP15.77■□□□□ 0.12
DDR1-229ENST00000396342 CDC23Q9UJX2 597 aa15.77■□□□□ 0.12
DDR1-229ENST00000396342 B3GNT3Q9Y2A9 372 aa15.77■□□□□ 0.12
DDR1-229ENST00000396342 R3HDM2Q9Y2K5 976 aaKnown RBP15.77■□□□□ 0.12
DDR1-229ENST00000396342 REXO2Q9Y3B8 237 aaKnown RBP15.77■□□□□ 0.12
DDR1-229ENST00000396342 BOD1L1Q8NFC6 3051 aa15.77■□□□□ 0.11
DDR1-229ENST00000396342 CLEC18AA5D8T8 446 aa15.76■□□□□ 0.11
DDR1-229ENST00000396342 NRDCO43847 1150 aa15.76■□□□□ 0.11
DDR1-229ENST00000396342 OR1I1O60431 355 aa15.76■□□□□ 0.11
DDR1-229ENST00000396342 SORBS2O94875 1100 aaKnown RBP15.76■□□□□ 0.11
DDR1-229ENST00000396342 CAPN1P07384 714 aa15.76■□□□□ 0.11
DDR1-229ENST00000396342 ERVK-10P10266 1014 aa15.76■□□□□ 0.11
DDR1-229ENST00000396342 PKLRP30613 574 aa15.76■□□□□ 0.11
DDR1-229ENST00000396342 SARNPP82979 210 aaKnown RBP15.76■□□□□ 0.11
DDR1-229ENST00000396342 AIMP2Q13155 320 aaKnown RBP15.76■□□□□ 0.11
DDR1-229ENST00000396342 SNX1Q13596 522 aa15.76■□□□□ 0.11
DDR1-229ENST00000396342 SLC9A5Q14940 896 aa15.76■□□□□ 0.11
DDR1-229ENST00000396342 RPS6KA1Q15418 735 aa15.76■□□□□ 0.11
DDR1-229ENST00000396342 MRNIPQ6NTE8 343 aa15.76■□□□□ 0.11
DDR1-229ENST00000396342 CLEC18BQ6UXF7 455 aa15.76■□□□□ 0.11
DDR1-229ENST00000396342 NAPRTQ6XQN6 538 aa15.76■□□□□ 0.11
DDR1-229ENST00000396342 CLEC18CQ8NCF0 446 aa15.76■□□□□ 0.11
DDR1-229ENST00000396342 ATG4AQ8WYN0 398 aa15.76■□□□□ 0.11
DDR1-229ENST00000396342 FKBP10Q96AY3 582 aa15.76■□□□□ 0.11
DDR1-229ENST00000396342 GBP5Q96PP8 586 aa15.76■□□□□ 0.11
DDR1-229ENST00000396342 DESI2Q9BSY9 194 aa15.76■□□□□ 0.11
DDR1-229ENST00000396342 SPHK1Q9NYA1 384 aa15.76■□□□□ 0.11
DDR1-229ENST00000396342 LUZP4Q9P127 313 aa15.76■□□□□ 0.11
DDR1-229ENST00000396342 GUCA1BQ9UMX6 200 aa15.76■□□□□ 0.11
DDR1-229ENST00000396342 DRG1Q9Y295 367 aaKnown RBP15.76■□□□□ 0.11
DDR1-229ENST00000396342 TCAF1Q9Y4C2 921 aa15.76■□□□□ 0.11
DDR1-229ENST00000396342 MAST4O15021 2626 aa15.75■□□□□ 0.11
DDR1-229ENST00000396342 BHMG1C9JSJ3 638 aaPredicted RBP15.75■□□□□ 0.11
DDR1-229ENST00000396342 H3BMM5 538 aa15.75■□□□□ 0.11
DDR1-229ENST00000396342 CD3EAPO15446 510 aaKnown RBP15.75■□□□□ 0.11
DDR1-229ENST00000396342 ALBP02768 609 aa15.75■□□□□ 0.11
DDR1-229ENST00000396342 MAGP20916 626 aa15.75■□□□□ 0.11
DDR1-229ENST00000396342 PSMA3P25788 255 aa15.75■□□□□ 0.11
DDR1-229ENST00000396342 CCR7P32248 378 aa15.75■□□□□ 0.11
DDR1-229ENST00000396342 UQCRFS1P47985 274 aa15.75■□□□□ 0.11
DDR1-229ENST00000396342 NPY2RP49146 381 aa15.75■□□□□ 0.11
DDR1-229ENST00000396342 SESN2P58004 480 aaPredicted RBP15.75■□□□□ 0.11
DDR1-229ENST00000396342 BASP1P80723 227 aaKnown RBP15.75■□□□□ 0.11
DDR1-229ENST00000396342 OCA2Q04671 838 aa15.75■□□□□ 0.11
DDR1-229ENST00000396342 RNF187Q5TA31 235 aaPredicted RBP15.75■□□□□ 0.11
DDR1-229ENST00000396342 DNAJC22Q8N4W6 341 aa15.75■□□□□ 0.11
DDR1-229ENST00000396342 OR13J1Q8NGT2 312 aa15.75■□□□□ 0.11
DDR1-229ENST00000396342 OR2L8Q8NGY9 312 aa15.75■□□□□ 0.11
DDR1-229ENST00000396342 ZUFSPQ96AP4 578 aa15.75■□□□□ 0.11
DDR1-229ENST00000396342 PSMG3-AS1Q96PY0 264 aa15.75■□□□□ 0.11
DDR1-229ENST00000396342 SELENOSQ9BQE4 189 aa15.75■□□□□ 0.11
DDR1-229ENST00000396342 IL22Q9GZX6 179 aa15.75■□□□□ 0.11
DDR1-229ENST00000396342 EPS8L2Q9H6S3 715 aa15.75■□□□□ 0.11
DDR1-229ENST00000396342 HOMER3Q9NSC5 361 aa15.75■□□□□ 0.11
DDR1-229ENST00000396342 TTC7AQ9ULT0 858 aaPredicted RBP15.75■□□□□ 0.11
DDR1-229ENST00000396342 CDYLQ9Y232 598 aa15.75■□□□□ 0.11
DDR1-229ENST00000396342 VPS9D1Q9Y2B5 631 aa15.75■□□□□ 0.11
DDR1-229ENST00000396342 COPG1Q9Y678 874 aaKnown RBP15.75■□□□□ 0.11
DDR1-229ENST00000396342 ZNF839A8K0R7 811 aa15.74■□□□□ 0.11
DDR1-229ENST00000396342 AGPSO00116 658 aa15.74■□□□□ 0.11
DDR1-229ENST00000396342 RASGRF2O14827 1237 aa15.74■□□□□ 0.11
DDR1-229ENST00000396342 PRPF4O43172 522 aaKnown RBP eCLIP15.74■□□□□ 0.112e-6■■■■□ 22.5
DDR1-229ENST00000396342 SRPX2O60687 465 aaPredicted RBP15.74■□□□□ 0.11
DDR1-229ENST00000396342 KLF7O75840 302 aaPredicted RBP15.74■□□□□ 0.11
DDR1-229ENST00000396342 PAMP19021 973 aa15.74■□□□□ 0.11
DDR1-229ENST00000396342 GLRBP48167 497 aa15.74■□□□□ 0.11
DDR1-229ENST00000396342 CARSP49589 748 aaKnown RBP15.74■□□□□ 0.11
DDR1-229ENST00000396342 ZIC1Q15915 447 aa15.74■□□□□ 0.11
DDR1-229ENST00000396342 RBBP7Q16576 425 aa15.74■□□□□ 0.11
DDR1-229ENST00000396342 FAM69BQ5VUD6 431 aa15.74■□□□□ 0.11
DDR1-229ENST00000396342 AGAP7PQ5VUJ5 663 aa15.74■□□□□ 0.11
DDR1-229ENST00000396342 FIGLAQ6QHK4 219 aa15.74■□□□□ 0.11
DDR1-229ENST00000396342 TAX1BP1Q86VP1 789 aa15.74■□□□□ 0.11
DDR1-229ENST00000396342 SLC13A5Q86YT5 568 aaPredicted RBP15.74■□□□□ 0.11
DDR1-229ENST00000396342 C2orf73Q8N5S3 287 aaPredicted RBP15.74■□□□□ 0.11
DDR1-229ENST00000396342 SPC24Q8NBT2 197 aa15.74■□□□□ 0.11
DDR1-229ENST00000396342 C1orf54Q8WWF1 131 aa15.74■□□□□ 0.11
DDR1-229ENST00000396342 AGAP4Q96P64 663 aa15.74■□□□□ 0.11
DDR1-229ENST00000396342 WDR54Q9H977 334 aa15.74■□□□□ 0.11
DDR1-229ENST00000396342 CUTCQ9NTM9 273 aa15.74■□□□□ 0.11
DDR1-229ENST00000396342 PLEKHB1Q9UF11 243 aaPredicted RBP15.74■□□□□ 0.11
DDR1-229ENST00000396342 SLC2A6Q9UGQ3 507 aa15.74■□□□□ 0.11
DDR1-229ENST00000396342 TCRBV7S2A1N4TA0A589 114 aa15.73■□□□□ 0.11
DDR1-229ENST00000396342 TARM1B6A8C7 271 aa15.73■□□□□ 0.11
DDR1-229ENST00000396342 E5RI56 91 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms