RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 ATXN10Q9UBB4 475 aa6.41□□□□□ -1.38
BDNF-203ENST00000395978 RAB23Q9ULC3 237 aa6.41□□□□□ -1.38
BDNF-203ENST00000395978 PCDHB3Q9Y5E6 796 aa6.41□□□□□ -1.38
BDNF-203ENST00000395978 PRSS51A0A1B0GVH4 220 aa6.4□□□□□ -1.38
BDNF-203ENST00000395978 FBP2O00757 339 aa6.4□□□□□ -1.38
BDNF-203ENST00000395978 SMAD6O43541 496 aaKnown RBP6.4□□□□□ -1.38
BDNF-203ENST00000395978 GUCY1B2O75343 617 aa6.4□□□□□ -1.38
BDNF-203ENST00000395978 OR6B1O95007 311 aa6.4□□□□□ -1.38
BDNF-203ENST00000395978 FABP3P05413 133 aa6.4□□□□□ -1.38
BDNF-203ENST00000395978 C8BP07358 591 aa6.4□□□□□ -1.38
BDNF-203ENST00000395978 ALDOCP09972 364 aaKnown RBP6.4□□□□□ -1.38
BDNF-203ENST00000395978 BCKDHAP12694 445 aa6.4□□□□□ -1.38
BDNF-203ENST00000395978 EFNA1P20827 205 aaPredicted RBP6.4□□□□□ -1.38
BDNF-203ENST00000395978 RPS3P23396 243 aaKnown RBP eCLIP6.4□□□□□ -1.38
BDNF-203ENST00000395978 ARF5P84085 180 aa6.4□□□□□ -1.38
BDNF-203ENST00000395978 MRPL58Q14197 206 aaKnown RBP6.4□□□□□ -1.38
BDNF-203ENST00000395978 ZBED5Q49AG3 693 aa6.4□□□□□ -1.38
BDNF-203ENST00000395978 PLEKHS1Q5SXH7 462 aa6.4□□□□□ -1.38
BDNF-203ENST00000395978 LETMD1Q6P1Q0 360 aa6.4□□□□□ -1.38
BDNF-203ENST00000395978 KCTD8Q6ZWB6 473 aa6.4□□□□□ -1.38
BDNF-203ENST00000395978 KRT73Q86Y46 540 aa6.4□□□□□ -1.38
BDNF-203ENST00000395978 CHPFQ8IZ52 775 aa6.4□□□□□ -1.38
BDNF-203ENST00000395978 PGBD3Q8N328 593 aa6.4□□□□□ -1.38
BDNF-203ENST00000395978 CYB5D2Q8WUJ1 264 aa6.4□□□□□ -1.38
BDNF-203ENST00000395978 RAD51AP1Q96B01 352 aa6.4□□□□□ -1.38
BDNF-203ENST00000395978 CMTM7Q96FZ5 175 aa6.4□□□□□ -1.38
BDNF-203ENST00000395978 TRMT2BQ96GJ1 504 aaKnown RBP6.4□□□□□ -1.38
BDNF-203ENST00000395978 ZNF514Q96K75 400 aaPredicted RBP6.4□□□□□ -1.38
BDNF-203ENST00000395978 C1QTNF7Q9BXJ2 289 aa6.4□□□□□ -1.38
BDNF-203ENST00000395978 CRISPLD1Q9H336 500 aa6.4□□□□□ -1.38
BDNF-203ENST00000395978 ARMC1Q9NVT9 282 aa6.4□□□□□ -1.38
BDNF-203ENST00000395978 TMEM45AQ9NWC5 275 aa6.4□□□□□ -1.38
BDNF-203ENST00000395978 MAFFQ9ULX9 164 aa6.4□□□□□ -1.38
BDNF-203ENST00000395978 PDE10AQ9Y233 779 aa6.4□□□□□ -1.38
BDNF-203ENST00000395978 GPR45Q9Y5Y3 372 aa6.4□□□□□ -1.38
BDNF-203ENST00000395978 TARM1B6A8C7 271 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 PI15O43692 258 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 NOBOXO60393 691 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 CREG1O75629 220 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 ANGPTL1O95841 491 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 SBK3P0C264 359 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 C7P10643 843 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 RPS6KA3P51812 740 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 OR4D2P58180 307 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 DAB2P98082 770 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 SFSWAPQ12872 951 aaKnown RBP6.4□□□□□ -1.39
BDNF-203ENST00000395978 SP140Q13342 867 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 PPIGQ13427 754 aaKnown RBP eCLIP6.4□□□□□ -1.39
BDNF-203ENST00000395978 MBTPS1Q14703 1052 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 ATP6AP1Q15904 470 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 ATP13A5Q4VNC0 1218 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 AGTRAPQ6RW13 159 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 MTSS1LQ765P7 747 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 TSPAN33Q86UF1 283 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 TMEM173Q86WV6 379 aaPredicted RBP6.4□□□□□ -1.39
BDNF-203ENST00000395978 TRIM48Q8IWZ4 208 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 CMTR2Q8IYT2 770 aaKnown RBP6.4□□□□□ -1.39
BDNF-203ENST00000395978 SLC39A11Q8N1S5 342 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 DEPDC4Q8N2C3 294 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 CBARPQ8N350 705 aaPredicted RBP6.4□□□□□ -1.39
BDNF-203ENST00000395978 ZNF483Q8TF39 744 aaPredicted RBP6.4□□□□□ -1.39
BDNF-203ENST00000395978 PHF10Q8WUB8 498 aaKnown RBP6.4□□□□□ -1.39
BDNF-203ENST00000395978 SLC22A17Q8WUG5 538 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 MYRFLQ96LU7 910 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 AIF1LQ9BQI0 150 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 HERC2P3Q9BVR0 1158 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 HMG20AQ9NP66 347 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 CCDC177Q9NQR7 707 aaPredicted RBP6.4□□□□□ -1.39
BDNF-203ENST00000395978 H2AFY2Q9P0M6 372 aaPredicted RBP6.4□□□□□ -1.39
BDNF-203ENST00000395978 HSFX1Q9UBD0 423 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 RIMS3Q9UJD0 308 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 IKZF3Q9UKT9 509 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 CLCA2Q9UQC9 943 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 WNT6Q9Y6F9 365 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 COL11A1P12107 1806 aaPredicted RBP6.4□□□□□ -1.39
BDNF-203ENST00000395978 MYOCOSA0A1B0GUC4 107 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 TCRBV3S1A0A5B6 114 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 SNTNA6NMZ2 147 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 H3BN98 237 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 UBFD1O14562 309 aaKnown RBP6.4□□□□□ -1.39
BDNF-203ENST00000395978 AP2A2O94973 939 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 GSTM1P09488 218 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 CD70P32970 193 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 TRPC1P48995 793 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 ALDH3A2P51648 485 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 ARSFP54793 590 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 ACVR1Q04771 509 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 PPP1R8Q12972 351 aaKnown RBP6.4□□□□□ -1.39
BDNF-203ENST00000395978 LAPTM5Q13571 262 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 RCAN2Q14206 197 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 TEAD2Q15562 447 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 PHKG1Q16816 387 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 TRIM71Q2Q1W2 868 aaKnown RBP6.4□□□□□ -1.39
BDNF-203ENST00000395978 C18orf21Q32NC0 220 aaPredicted RBP6.4□□□□□ -1.39
BDNF-203ENST00000395978 KCTD21Q4G0X4 260 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 PAGE3Q5JUK9 113 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 TMEM207Q6UWW9 146 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 CASP12Q6UXS9 341 aa6.4□□□□□ -1.39
BDNF-203ENST00000395978 THOC6Q86W42 341 aaKnown RBP6.4□□□□□ -1.39
BDNF-203ENST00000395978 KIAA2013Q8IYS2 634 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms