RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 TCF15Q12870 199 aa18.79■□□□□ 0.6
LMNB1-202ENST00000395354 TRAF3Q13114 568 aa18.79■□□□□ 0.6
LMNB1-202ENST00000395354 PTK2BQ14289 1009 aa18.79■□□□□ 0.6
LMNB1-202ENST00000395354 SNCBQ16143 134 aa18.79■□□□□ 0.6
LMNB1-202ENST00000395354 ZNF658BQ4V348 819 aaPredicted RBP18.79■□□□□ 0.6
LMNB1-202ENST00000395354 SNX32Q86XE0 403 aa18.79■□□□□ 0.6
LMNB1-202ENST00000395354 BEND7Q8N7W2 519 aaPredicted RBP18.79■□□□□ 0.6
LMNB1-202ENST00000395354 PRSS33Q8NF86 280 aa18.79■□□□□ 0.6
LMNB1-202ENST00000395354 OR52B6Q8NGF0 335 aa18.79■□□□□ 0.6
LMNB1-202ENST00000395354 SKA2Q8WVK7 121 aaPredicted RBP18.79■□□□□ 0.6
LMNB1-202ENST00000395354 ATP6V1E2Q96A05 226 aa18.79■□□□□ 0.6
LMNB1-202ENST00000395354 HIC2Q96JB3 615 aa18.79■□□□□ 0.6
LMNB1-202ENST00000395354 SLC32A1Q9H598 525 aa18.79■□□□□ 0.6
LMNB1-202ENST00000395354 AASDHPPTQ9NRN7 309 aa18.79■□□□□ 0.6
LMNB1-202ENST00000395354 RIC8BQ9NVN3 520 aa18.79■□□□□ 0.6
LMNB1-202ENST00000395354 NDE1Q9NXR1 346 aa18.79■□□□□ 0.6
LMNB1-202ENST00000395354 KNL1Q8NG31 2342 aa18.78■□□□□ 0.6
LMNB1-202ENST00000395354 H0Y8X5 98 aa18.78■□□□□ 0.6
LMNB1-202ENST00000395354 PSMD12O00232 456 aaPredicted RBP18.78■□□□□ 0.6
LMNB1-202ENST00000395354 LINC00032P0C843 101 aa18.78■□□□□ 0.6
LMNB1-202ENST00000395354 EBLN1P0CF75 366 aa18.78■□□□□ 0.6
LMNB1-202ENST00000395354 EPB42P16452 691 aa18.78■□□□□ 0.6
LMNB1-202ENST00000395354 HNRNPH1P31943 449 aaKnown RBP18.78■□□□□ 0.6
LMNB1-202ENST00000395354 CCNG1P51959 295 aa18.78■□□□□ 0.6
LMNB1-202ENST00000395354 STX1BP61266 288 aa18.78■□□□□ 0.6
LMNB1-202ENST00000395354 GSTA3Q16772 222 aa18.78■□□□□ 0.6
LMNB1-202ENST00000395354 LETMD1Q6P1Q0 360 aa18.78■□□□□ 0.6
LMNB1-202ENST00000395354 GCNT7Q6ZNI0 430 aa18.78■□□□□ 0.6
LMNB1-202ENST00000395354 MILR1Q7Z6M3 343 aa18.78■□□□□ 0.6
LMNB1-202ENST00000395354 PACS2Q86VP3 889 aa18.78■□□□□ 0.6
LMNB1-202ENST00000395354 SLC22A15Q8IZD6 547 aa18.78■□□□□ 0.6
LMNB1-202ENST00000395354 OR4F6Q8NGB9 312 aa18.78■□□□□ 0.6
LMNB1-202ENST00000395354 C1orf216Q8TAB5 229 aa18.78■□□□□ 0.6
LMNB1-202ENST00000395354 TUBGCP3Q96CW5 907 aa18.78■□□□□ 0.6
LMNB1-202ENST00000395354 COX14Q96I36 57 aa18.78■□□□□ 0.6
LMNB1-202ENST00000395354 SLC6A18Q96N87 628 aa18.78■□□□□ 0.6
LMNB1-202ENST00000395354 TRPS1Q9UHF7 1281 aa18.78■□□□□ 0.6
LMNB1-202ENST00000395354 POLG2Q9UHN1 485 aa18.78■□□□□ 0.6
LMNB1-202ENST00000395354 TIMM22Q9Y584 194 aa18.78■□□□□ 0.6
LMNB1-202ENST00000395354 OR1A2Q9Y585 309 aa18.78■□□□□ 0.6
LMNB1-202ENST00000395354 FANCMQ8IYD8 2048 aa18.78■□□□□ 0.6
LMNB1-202ENST00000395354 ATP6AP2A0A1C7CYW4 349 aa18.77■□□□□ 0.6
LMNB1-202ENST00000395354 ATP6AP2O75787 350 aa18.77■□□□□ 0.6
LMNB1-202ENST00000395354 WDR47O94967 919 aa18.77■□□□□ 0.6
LMNB1-202ENST00000395354 HGFP14210 728 aa18.77■□□□□ 0.6
LMNB1-202ENST00000395354 RACK1P63244 317 aaKnown RBP18.77■□□□□ 0.6
LMNB1-202ENST00000395354 GRIK2Q13002 908 aa18.77■□□□□ 0.6
LMNB1-202ENST00000395354 CUL3Q13618 768 aa18.77■□□□□ 0.6
LMNB1-202ENST00000395354 HEATR4Q86WZ0 1026 aa18.77■□□□□ 0.6
LMNB1-202ENST00000395354 SCUBE1Q8IWY4 988 aa18.77■□□□□ 0.6
LMNB1-202ENST00000395354 CDYL2Q8N8U2 506 aa18.77■□□□□ 0.6
LMNB1-202ENST00000395354 METTL6Q8TCB7 284 aa18.77■□□□□ 0.6
LMNB1-202ENST00000395354 FBXL8Q96CD0 374 aa18.77■□□□□ 0.6
LMNB1-202ENST00000395354 MARK4Q96L34 752 aa18.77■□□□□ 0.6
LMNB1-202ENST00000395354 APOOQ9BUR5 198 aa18.77■□□□□ 0.6
LMNB1-202ENST00000395354 TEX101Q9BY14 249 aa18.77■□□□□ 0.6
LMNB1-202ENST00000395354 WDR26Q9H7D7 661 aa18.77■□□□□ 0.6
LMNB1-202ENST00000395354 BAIAP2L1Q9UHR4 511 aa18.77■□□□□ 0.6
LMNB1-202ENST00000395354 ITGAXP20702 1163 aa18.76■□□□□ 0.59
LMNB1-202ENST00000395354 SLC6A12P48065 614 aa18.76■□□□□ 0.59
LMNB1-202ENST00000395354 SLC25A3Q00325 362 aa18.76■□□□□ 0.59
LMNB1-202ENST00000395354 STX5Q13190 355 aa18.76■□□□□ 0.59
LMNB1-202ENST00000395354 FASTKQ14296 549 aaKnown RBP18.76■□□□□ 0.59
LMNB1-202ENST00000395354 C16orf89Q6UX73 402 aa18.76■□□□□ 0.59
LMNB1-202ENST00000395354 ABI3BPQ7Z7G0 1075 aa18.76■□□□□ 0.59
LMNB1-202ENST00000395354 KYQ8NBH2 561 aa18.76■□□□□ 0.59
LMNB1-202ENST00000395354 FBXO15Q8NCQ5 510 aaPredicted RBP18.76■□□□□ 0.59
LMNB1-202ENST00000395354 ATL1Q8WXF7 558 aa18.76■□□□□ 0.59
LMNB1-202ENST00000395354 MAGEB10Q96LZ2 347 aaPredicted RBP18.76■□□□□ 0.59
LMNB1-202ENST00000395354 FOPNLQ96NB1 174 aa18.76■□□□□ 0.59
LMNB1-202ENST00000395354 THTPAQ9BU02 230 aa18.76■□□□□ 0.59
LMNB1-202ENST00000395354 SLC29A3Q9BZD2 475 aa18.76■□□□□ 0.59
LMNB1-202ENST00000395354 OR2AG1Q9H205 316 aa18.76■□□□□ 0.59
LMNB1-202ENST00000395354 EFCAB1Q9HAE3 211 aa18.76■□□□□ 0.59
LMNB1-202ENST00000395354 TM9SF3Q9HD45 589 aa18.76■□□□□ 0.59
LMNB1-202ENST00000395354 TMEM45AQ9NWC5 275 aa18.76■□□□□ 0.59
LMNB1-202ENST00000395354 ATXN10Q9UBB4 475 aa18.76■□□□□ 0.59
LMNB1-202ENST00000395354 BTRCQ9Y297 605 aa18.76■□□□□ 0.59
LMNB1-202ENST00000395354 TMEM202A6NGA9 273 aa18.76■□□□□ 0.59
LMNB1-202ENST00000395354 A8MUI8 341 aa18.76■□□□□ 0.59
LMNB1-202ENST00000395354 CATP04040 527 aaKnown RBP18.76■□□□□ 0.59
LMNB1-202ENST00000395354 CAPN1P07384 714 aa18.76■□□□□ 0.59
LMNB1-202ENST00000395354 IDO1P14902 403 aa18.76■□□□□ 0.59
LMNB1-202ENST00000395354 MAP4P27816 1152 aaKnown RBP18.76■□□□□ 0.59
LMNB1-202ENST00000395354 CD38P28907 300 aa18.76■□□□□ 0.59
LMNB1-202ENST00000395354 PFN3P60673 137 aa18.76■□□□□ 0.59
LMNB1-202ENST00000395354 CDK3Q00526 305 aa18.76■□□□□ 0.59
LMNB1-202ENST00000395354 LPAL2Q16609 132 aa18.76■□□□□ 0.59
LMNB1-202ENST00000395354 Q6ZSR6 202 aa18.76■□□□□ 0.59
LMNB1-202ENST00000395354 KLHDC8AQ8IYD2 350 aa18.76■□□□□ 0.59
LMNB1-202ENST00000395354 ULK2Q8IYT8 1036 aa18.76■□□□□ 0.59
LMNB1-202ENST00000395354 MFSD2AQ8NA29 543 aa18.76■□□□□ 0.59
LMNB1-202ENST00000395354 FAM174AQ8TBP5 190 aa18.76■□□□□ 0.59
LMNB1-202ENST00000395354 MAGEC3Q8TD91 643 aa18.76■□□□□ 0.59
LMNB1-202ENST00000395354 KLHDC7BQ96G42 594 aa18.76■□□□□ 0.59
LMNB1-202ENST00000395354 LGR4Q9BXB1 951 aa18.76■□□□□ 0.59
LMNB1-202ENST00000395354 DENND2DQ9H6A0 471 aaPredicted RBP18.76■□□□□ 0.59
LMNB1-202ENST00000395354 PHPT1Q9NRX4 125 aaPredicted RBP18.76■□□□□ 0.59
LMNB1-202ENST00000395354 CACNB4O00305 520 aaPredicted RBP18.75■□□□□ 0.59
LMNB1-202ENST00000395354 TOR1BO14657 336 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms