RNA–Protein interactions for RNA: ENST00000395131.5

PFDN6-204, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-204ENST00000395131 CHRNB4P30926 498 aa13.17□□□□□ -0.3
PFDN6-204ENST00000395131 ALDH6A1Q02252 535 aaKnown RBP13.17□□□□□ -0.3
PFDN6-204ENST00000395131 GABPB1Q06547 395 aaPredicted RBP13.17□□□□□ -0.3
PFDN6-204ENST00000395131 OLIG2Q13516 323 aa13.17□□□□□ -0.3
PFDN6-204ENST00000395131 WHAMMP3Q1A5X7 153 aa13.17□□□□□ -0.3
PFDN6-204ENST00000395131 CLEC16AQ2KHT3 1053 aa13.17□□□□□ -0.3
PFDN6-204ENST00000395131 DEFB110Q30KQ9 67 aa13.17□□□□□ -0.3
PFDN6-204ENST00000395131 ATP13A4Q4VNC1 1196 aa13.17□□□□□ -0.3
PFDN6-204ENST00000395131 DCUN1D2Q6PH85 259 aa13.17□□□□□ -0.3
PFDN6-204ENST00000395131 TMEM220Q6QAJ8 160 aa13.17□□□□□ -0.3
PFDN6-204ENST00000395131 SPESP1Q6UW49 350 aa13.17□□□□□ -0.3
PFDN6-204ENST00000395131 NAPRTQ6XQN6 538 aa13.17□□□□□ -0.3
PFDN6-204ENST00000395131 RIPOR1Q6ZS17 1223 aa13.17□□□□□ -0.3
PFDN6-204ENST00000395131 NDUFAF7Q7L592 441 aa13.17□□□□□ -0.3
PFDN6-204ENST00000395131 SIAH3Q8IW03 269 aa13.17□□□□□ -0.3
PFDN6-204ENST00000395131 ADGRF3Q8IZF5 1079 aa13.17□□□□□ -0.3
PFDN6-204ENST00000395131 DNAJC22Q8N4W6 341 aa13.17□□□□□ -0.3
PFDN6-204ENST00000395131 TAB3Q8N5C8 712 aaPredicted RBP13.17□□□□□ -0.3
PFDN6-204ENST00000395131 SIRT6Q8N6T7 355 aa13.17□□□□□ -0.3
PFDN6-204ENST00000395131 ACRBPQ8NEB7 543 aa13.17□□□□□ -0.3
PFDN6-204ENST00000395131 DLG3Q92796 817 aa13.17□□□□□ -0.3
PFDN6-204ENST00000395131 HDAC10Q969S8 669 aa13.17□□□□□ -0.3
PFDN6-204ENST00000395131 ERGIC2Q96RQ1 377 aa13.17□□□□□ -0.3
PFDN6-204ENST00000395131 NAPGQ99747 312 aaPredicted RBP13.17□□□□□ -0.3
PFDN6-204ENST00000395131 DESI2Q9BSY9 194 aa13.17□□□□□ -0.3
PFDN6-204ENST00000395131 TSGA10Q9BZW7 698 aa13.17□□□□□ -0.3
PFDN6-204ENST00000395131 UCK2Q9BZX2 261 aa13.17□□□□□ -0.3
PFDN6-204ENST00000395131 ZCCHC2Q9C0B9 1178 aaKnown RBP13.17□□□□□ -0.3
PFDN6-204ENST00000395131 LZTFL1Q9NQ48 299 aa13.17□□□□□ -0.3
PFDN6-204ENST00000395131 HAUS2Q9NVX0 235 aa13.17□□□□□ -0.3
PFDN6-204ENST00000395131 RBM22Q9NW64 420 aaKnown RBP eCLIP13.17□□□□□ -0.3
PFDN6-204ENST00000395131 ACTR10Q9NZ32 417 aa13.17□□□□□ -0.3
PFDN6-204ENST00000395131 IL17CQ9P0M4 197 aa13.17□□□□□ -0.3
PFDN6-204ENST00000395131 SHOC2Q9UQ13 582 aa13.17□□□□□ -0.3
PFDN6-204ENST00000395131 PHF3Q92576 2039 aaKnown RBP13.17□□□□□ -0.3
PFDN6-204ENST00000395131 HIVEP2P31629 2446 aa13.17□□□□□ -0.3
PFDN6-204ENST00000395131 HRNRQ86YZ3 2850 aaPredicted RBP13.16□□□□□ -0.3
PFDN6-204ENST00000395131 NSG1A0A0A6YYJ2 146 aa13.16□□□□□ -0.3
PFDN6-204ENST00000395131 FAM237BA0A1B0GVD1 139 aa13.16□□□□□ -0.3
PFDN6-204ENST00000395131 H3BRJ5 948 aa13.16□□□□□ -0.3
PFDN6-204ENST00000395131 MAP2K7O14733 419 aa13.16□□□□□ -0.3
PFDN6-204ENST00000395131 MATN3O15232 486 aa13.16□□□□□ -0.3
PFDN6-204ENST00000395131 MMP2P08253 660 aa13.16□□□□□ -0.3
PFDN6-204ENST00000395131 SLC35G4P0C7Q5 338 aa13.16□□□□□ -0.3
PFDN6-204ENST00000395131 MIPP30301 263 aa13.16□□□□□ -0.3
PFDN6-204ENST00000395131 SERPINB6P35237 376 aa13.16□□□□□ -0.3
PFDN6-204ENST00000395131 NSG1P42857 185 aa13.16□□□□□ -0.3
PFDN6-204ENST00000395131 DPYSL2Q16555 572 aa13.16□□□□□ -0.3
PFDN6-204ENST00000395131 MAN2A1Q16706 1144 aa13.16□□□□□ -0.3
PFDN6-204ENST00000395131 DEFB113Q30KQ7 82 aa13.16□□□□□ -0.3
PFDN6-204ENST00000395131 ZNF766Q5HY98 468 aa13.16□□□□□ -0.3
PFDN6-204ENST00000395131 TXNRD3NBQ6F5E7 133 aa13.16□□□□□ -0.3
PFDN6-204ENST00000395131 C3P1Q6ZMU1 363 aa13.16□□□□□ -0.3
PFDN6-204ENST00000395131 SHISA6Q6ZSJ9 500 aa13.16□□□□□ -0.3
PFDN6-204ENST00000395131 POLNQ7Z5Q5 900 aa13.16□□□□□ -0.3
PFDN6-204ENST00000395131 KRTAP1-3Q8IUG1 177 aa13.16□□□□□ -0.3
PFDN6-204ENST00000395131 CLYBLQ8N0X4 340 aa13.16□□□□□ -0.3
PFDN6-204ENST00000395131 GHDCQ8N2G8 530 aa13.16□□□□□ -0.3
PFDN6-204ENST00000395131 MARVELD2Q8N4S9 558 aa13.16□□□□□ -0.3
PFDN6-204ENST00000395131 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.16□□□□□ -0.3
PFDN6-204ENST00000395131 OR2L2Q8NH16 312 aa13.16□□□□□ -0.3
PFDN6-204ENST00000395131 GDAP1Q8TB36 358 aa13.16□□□□□ -0.3
PFDN6-204ENST00000395131 RMDN2Q96LZ7 410 aa13.16□□□□□ -0.3
PFDN6-204ENST00000395131 CLEC4MQ9H2X3 399 aaPredicted RBP13.16□□□□□ -0.3
PFDN6-204ENST00000395131 NDST4Q9H3R1 872 aa13.16□□□□□ -0.3
PFDN6-204ENST00000395131 ENAMQ9NRM1 1142 aa13.16□□□□□ -0.3
PFDN6-204ENST00000395131 RASSF1Q9NS23 344 aa13.16□□□□□ -0.3
PFDN6-204ENST00000395131 PLCL2Q9UPR0 1127 aa13.16□□□□□ -0.3
PFDN6-204ENST00000395131 RNF6Q9Y252 685 aa13.16□□□□□ -0.3
PFDN6-204ENST00000395131 OR2AG2A6NM03 316 aa13.15□□□□□ -0.3
PFDN6-204ENST00000395131 NPIPA5E9PKD4 350 aa13.15□□□□□ -0.3
PFDN6-204ENST00000395131 WFS1O76024 890 aa13.15□□□□□ -0.3
PFDN6-204ENST00000395131 GFPT2O94808 682 aa13.15□□□□□ -0.3
PFDN6-204ENST00000395131 PYGMP11217 842 aa13.15□□□□□ -0.3
PFDN6-204ENST00000395131 COX6A1P12074 109 aa13.15□□□□□ -0.3
PFDN6-204ENST00000395131 MCM3P25205 808 aa13.15□□□□□ -0.3
PFDN6-204ENST00000395131 PSMA2P25787 234 aa13.15□□□□□ -0.3
PFDN6-204ENST00000395131 CBX1P83916 185 aa13.15□□□□□ -0.3
PFDN6-204ENST00000395131 KRT33BQ14525 404 aa13.15□□□□□ -0.3
PFDN6-204ENST00000395131 BRD3Q15059 726 aa13.15□□□□□ -0.3
PFDN6-204ENST00000395131 LDLRAP1Q5SW96 308 aa13.15□□□□□ -0.3
PFDN6-204ENST00000395131 TMEM211Q6ICI0 200 aa13.15□□□□□ -0.3
PFDN6-204ENST00000395131 PAMR1Q6UXH9 720 aa13.15□□□□□ -0.3
PFDN6-204ENST00000395131 TTLL10Q6ZVT0 673 aa13.15□□□□□ -0.3
PFDN6-204ENST00000395131 FGD2Q7Z6J4 655 aa13.15□□□□□ -0.3
PFDN6-204ENST00000395131 AMIGO1Q86WK6 493 aa13.15□□□□□ -0.3
PFDN6-204ENST00000395131 CPSF7Q8N684 471 aaKnown RBP13.15□□□□□ -0.3
PFDN6-204ENST00000395131 DDHD1Q8NEL9 900 aa13.15□□□□□ -0.3
PFDN6-204ENST00000395131 LINC00615Q96LM1 132 aaPredicted RBP13.15□□□□□ -0.3
PFDN6-204ENST00000395131 CSPG4P5Q96PW8 444 aa13.15□□□□□ -0.3
PFDN6-204ENST00000395131 TRIB3Q96RU7 358 aa13.15□□□□□ -0.3
PFDN6-204ENST00000395131 CCM2Q9BSQ5 444 aa13.15□□□□□ -0.3
PFDN6-204ENST00000395131 IL1RAPL1Q9NZN1 696 aa13.15□□□□□ -0.3
PFDN6-204ENST00000395131 LRFN1Q9P244 771 aa13.15□□□□□ -0.3
PFDN6-204ENST00000395131 CTSFQ9UBX1 484 aa13.15□□□□□ -0.3
PFDN6-204ENST00000395131 NPIPA1Q9UND3 350 aa13.15□□□□□ -0.3
PFDN6-204ENST00000395131 ZNF711Q9Y462 761 aa13.15□□□□□ -0.3
PFDN6-204ENST00000395131 L3MBTL1Q9Y468 752 aa13.15□□□□□ -0.3
PFDN6-204ENST00000395131 FAM227AF5H4B4 570 aa13.14□□□□□ -0.31
PFDN6-204ENST00000395131 DSCR3O14972 297 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms