RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 GPAMQ9HCL2 828 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 APMAPQ9HDC9 416 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 SLC39A1Q9NY26 324 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 FOXJ2Q9P0K8 574 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 CDRT15L2A8MXV6 281 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 NELFEP18615 380 aaKnown RBP19.25■□□□□ 0.67
SNCA-203ENST00000394986 MAP4P27816 1152 aaKnown RBP19.25■□□□□ 0.67
SNCA-203ENST00000394986 PSMB5P28074 263 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 PMS2P54278 862 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 SLC12A2P55011 1212 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 TBC1D25Q3MII6 688 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 LRRC8EQ6NSJ5 796 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 IGF2-ASQ6U949 168 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 MBOAT1Q6ZNC8 495 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 CMC1Q7Z7K0 106 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 LSMEM2Q8N112 164 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 SPATA6LQ8N4H0 392 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 RAB11FIP5Q9BXF6 653 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 PITPNM3Q9BZ71 974 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 TXLNGYQ9BZA5 131 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 SOHLH2Q9NX45 425 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 SPATA7Q9P0W8 599 aa19.25■□□□□ 0.67
SNCA-203ENST00000394986 TPRP12270 2363 aaKnown RBP19.24■□□□□ 0.67
SNCA-203ENST00000394986 B4E171 279 aa19.24■□□□□ 0.67
SNCA-203ENST00000394986 TAF4O00268 1085 aa19.24■□□□□ 0.67
SNCA-203ENST00000394986 ZBTB14O43829 449 aa19.24■□□□□ 0.67
SNCA-203ENST00000394986 WISP3O95389 354 aaPredicted RBP19.24■□□□□ 0.67
SNCA-203ENST00000394986 SLC16A8O95907 504 aa19.24■□□□□ 0.67
SNCA-203ENST00000394986 EBLN1P0CF75 366 aa19.24■□□□□ 0.67
SNCA-203ENST00000394986 TNFRSF8P28908 595 aa19.24■□□□□ 0.67
SNCA-203ENST00000394986 SLC5A2P31639 672 aa19.24■□□□□ 0.67
SNCA-203ENST00000394986 TSPAN7P41732 249 aa19.24■□□□□ 0.67
SNCA-203ENST00000394986 ARL4DP49703 201 aa19.24■□□□□ 0.67
SNCA-203ENST00000394986 VSNL1P62760 191 aa19.24■□□□□ 0.67
SNCA-203ENST00000394986 MC2RQ01718 297 aa19.24■□□□□ 0.67
SNCA-203ENST00000394986 FOXM1Q08050 763 aa19.24■□□□□ 0.67
SNCA-203ENST00000394986 KIR2DS3Q14952 304 aa19.24■□□□□ 0.67
SNCA-203ENST00000394986 PHKG1Q16816 387 aa19.24■□□□□ 0.67
SNCA-203ENST00000394986 ANKS6Q68DC2 871 aa19.24■□□□□ 0.67
SNCA-203ENST00000394986 FBXO15Q8NCQ5 510 aaPredicted RBP19.24■□□□□ 0.67
SNCA-203ENST00000394986 PPFIBP2Q8ND30 876 aa19.24■□□□□ 0.67
SNCA-203ENST00000394986 TRAPPC9Q96Q05 1148 aa19.24■□□□□ 0.67
SNCA-203ENST00000394986 C1GALT1Q9NS00 363 aa19.24■□□□□ 0.67
SNCA-203ENST00000394986 THSD1Q9NS62 852 aa19.24■□□□□ 0.67
SNCA-203ENST00000394986 DKK4Q9UBT3 224 aa19.24■□□□□ 0.67
SNCA-203ENST00000394986 PDE10AQ9Y233 779 aa19.24■□□□□ 0.67
SNCA-203ENST00000394986 KLHL20Q9Y2M5 609 aa19.24■□□□□ 0.67
SNCA-203ENST00000394986 B3GALT1Q9Y5Z6 326 aa19.24■□□□□ 0.67
SNCA-203ENST00000394986 A0A087WUV0 522 aaPredicted RBP19.23■□□□□ 0.67
SNCA-203ENST00000394986 HMX2A2RU54 273 aa19.23■□□□□ 0.67
SNCA-203ENST00000394986 NPEPPSL1A6NEC2 478 aa19.23■□□□□ 0.67
SNCA-203ENST00000394986 CDC7O00311 574 aa19.23■□□□□ 0.67
SNCA-203ENST00000394986 RIPK2O43353 540 aa19.23■□□□□ 0.67
SNCA-203ENST00000394986 ZBTB11O95625 1053 aaPredicted RBP19.23■□□□□ 0.67
SNCA-203ENST00000394986 C8GP07360 202 aa19.23■□□□□ 0.67
SNCA-203ENST00000394986 FOLR1P15328 257 aa19.23■□□□□ 0.67
SNCA-203ENST00000394986 STMN1P16949 149 aa19.23■□□□□ 0.67
SNCA-203ENST00000394986 TSTA3Q13630 321 aaPredicted RBP19.23■□□□□ 0.67
SNCA-203ENST00000394986 CYP2A13Q16696 494 aa19.23■□□□□ 0.67
SNCA-203ENST00000394986 MROH9Q5TGP6 573 aa19.23■□□□□ 0.67
SNCA-203ENST00000394986 SUSD1Q6UWL2 747 aa19.23■□□□□ 0.67
SNCA-203ENST00000394986 TRMT10CQ7L0Y3 403 aaKnown RBP19.23■□□□□ 0.67
SNCA-203ENST00000394986 CLEC14AQ86T13 490 aa19.23■□□□□ 0.67
SNCA-203ENST00000394986 RAB42Q8N4Z0 105 aa19.23■□□□□ 0.67
SNCA-203ENST00000394986 SLC44A1Q8WWI5 657 aa19.23■□□□□ 0.67
SNCA-203ENST00000394986 TSPAN17Q96FV3 270 aa19.23■□□□□ 0.67
SNCA-203ENST00000394986 ZNF578Q96N58 590 aaPredicted RBP19.23■□□□□ 0.67
SNCA-203ENST00000394986 OR6C1Q96RD1 312 aa19.23■□□□□ 0.67
SNCA-203ENST00000394986 TAAR9Q96RI9 348 aa19.23■□□□□ 0.67
SNCA-203ENST00000394986 PAFAH2Q99487 392 aa19.23■□□□□ 0.67
SNCA-203ENST00000394986 EPB41L4BQ9H329 900 aa19.23■□□□□ 0.67
SNCA-203ENST00000394986 POPDC3Q9HBV1 291 aa19.23■□□□□ 0.67
SNCA-203ENST00000394986 LNPEPQ9UIQ6 1025 aa19.23■□□□□ 0.67
SNCA-203ENST00000394986 RAXQ9Y2V3 346 aa19.23■□□□□ 0.67
SNCA-203ENST00000394986 A0A0J9YY10 115 aa19.22■□□□□ 0.67
SNCA-203ENST00000394986 A0A1W2PPV9 198 aa19.22■□□□□ 0.67
SNCA-203ENST00000394986 POC1B-GALNT4F8VUJ3 575 aa19.22■□□□□ 0.67
SNCA-203ENST00000394986 PRICKLE3O43900 615 aaPredicted RBP19.22■□□□□ 0.67
SNCA-203ENST00000394986 ERGP11308 486 aa19.22■□□□□ 0.67
SNCA-203ENST00000394986 CYP2A7P20853 494 aa19.22■□□□□ 0.67
SNCA-203ENST00000394986 ERVPABLB-1P60509 514 aa19.22■□□□□ 0.67
SNCA-203ENST00000394986 RAB10P61026 200 aa19.22■□□□□ 0.67
SNCA-203ENST00000394986 HSD11B2P80365 405 aa19.22■□□□□ 0.67
SNCA-203ENST00000394986 ILF2Q12905 390 aaKnown RBP19.22■□□□□ 0.67
SNCA-203ENST00000394986 SP140Q13342 867 aa19.22■□□□□ 0.67
SNCA-203ENST00000394986 ZKSCAN8Q15776 578 aaPredicted RBP19.22■□□□□ 0.67
SNCA-203ENST00000394986 ZIC1Q15915 447 aa19.22■□□□□ 0.67
SNCA-203ENST00000394986 PROSER1Q86XN7 944 aa19.22■□□□□ 0.67
SNCA-203ENST00000394986 KMT5CQ86Y97 462 aa19.22■□□□□ 0.67
SNCA-203ENST00000394986 D2HGDHQ8N465 521 aa19.22■□□□□ 0.67
SNCA-203ENST00000394986 NKAPQ8N5F7 415 aaKnown RBP19.22■□□□□ 0.67
SNCA-203ENST00000394986 EIF1ADQ8N9N8 165 aaKnown RBP19.22■□□□□ 0.67
SNCA-203ENST00000394986 KDF1Q8NAX2 398 aaPredicted RBP19.22■□□□□ 0.67
SNCA-203ENST00000394986 ZNF480Q8WV37 535 aa19.22■□□□□ 0.67
SNCA-203ENST00000394986 PDLIM5Q96HC4 596 aaKnown RBP19.22■□□□□ 0.67
SNCA-203ENST00000394986 ACAT2Q9BWD1 397 aa19.22■□□□□ 0.67
SNCA-203ENST00000394986 SLC12A9Q9BXP2 914 aa19.22■□□□□ 0.67
SNCA-203ENST00000394986 PARVBQ9HBI1 364 aa19.22■□□□□ 0.67
SNCA-203ENST00000394986 SYTL2Q9HCH5 934 aa19.22■□□□□ 0.67
SNCA-203ENST00000394986 ABCF3Q9NUQ8 709 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms