RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 GRHL3Q8TE85 626 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 ROPN1LQ96C74 230 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 TDP1Q9NUW8 608 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 A0A0U1RQF3 1178 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 FAM149AA5PLN7 773 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 MMP20O60882 483 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 TRIM3O75382 744 aaPredicted RBP10.18□□□□□ -0.78
COL4A6-203ENST00000394872 GATBO75879 557 aaKnown RBP10.18□□□□□ -0.78
COL4A6-203ENST00000394872 TSPAN9O75954 239 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 SCGNO76038 276 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 SWI5Q1ZZU3 235 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 TOR1AIP1Q5JTV8 583 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 FBXL22Q6P050 247 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 GHDCQ8N2G8 530 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 CAMKVQ8NCB2 501 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 SMURF2Q9HAU4 748 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 SMPD3Q9NY59 655 aaPredicted RBP10.18□□□□□ -0.78
COL4A6-203ENST00000394872 MAN2B2Q9Y2E5 1009 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 NIPSNAP2O75323 286 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 ATP1B2P14415 290 aaPredicted RBP10.18□□□□□ -0.78
COL4A6-203ENST00000394872 CSTF2P33240 577 aaKnown RBP eCLIP10.18□□□□□ -0.78
COL4A6-203ENST00000394872 IRF9Q00978 393 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 ARHGAP40Q5TG30 622 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 LYSMD3Q7Z3D4 306 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 SVOPLQ8N434 492 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 KCTD13Q8WZ19 329 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 NTAN1Q96AB6 310 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 COQ8BQ96D53 544 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 RNF39Q9H2S5 420 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 TRPV5Q9NQA5 729 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 PHLPP1O60346 1717 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 PRAMEF12O95522 483 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 PDHA2P29803 388 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 KCNJ5P48544 419 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 TAS2R39P59534 338 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 SCARB2Q14108 478 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 MYLK3Q32MK0 819 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 ZDHHC21Q8IVQ6 265 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 ZZZ3Q8IYH5 903 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 GLB1L3Q8NCI6 653 aaPredicted RBP10.18□□□□□ -0.78
COL4A6-203ENST00000394872 PYCR2Q96C36 320 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 MARCH7Q9H992 704 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 CTPS2Q9NRF8 586 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 SCML2Q9UQR0 700 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 DGKBQ9Y6T7 804 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 SLIT2O94813 1529 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 A0A1W2PRG6 482 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 NEMP2A6NFY4 417 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 CAPN8A6NHC0 703 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 ANXA2P2A6NMY6 339 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 NFKBIEO00221 500 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 PEX12O00623 359 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 GPIP06744 558 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 ANXA2P07355 339 aaKnown RBP10.18□□□□□ -0.78
COL4A6-203ENST00000394872 PCSK2P16519 638 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 RPS9P46781 194 aaKnown RBP10.18□□□□□ -0.78
COL4A6-203ENST00000394872 RASGEF1BQ0VAM2 473 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 METTL21CQ5VZV1 264 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 ALG1LQ6GMV1 187 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 SLC13A3Q8WWT9 602 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 DIRAS2Q96HU8 199 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 FARSBQ9NSD9 589 aaKnown RBP10.18□□□□□ -0.78
COL4A6-203ENST00000394872 MOCS1Q9NZB8 636 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 ITGB1BP2Q9UKP3 347 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 NOX1Q9Y5S8 564 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 STATHP02808 62 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 TYRP14679 529 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 BDKRB1P46663 353 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 TARDBPQ13148 414 aaKnown RBP eCLIP10.17□□□□□ -0.78
COL4A6-203ENST00000394872 CBX3Q13185 183 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 ULK3Q6PHR2 472 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 CCDC80Q76M96 950 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 PLA2G15Q8NCC3 412 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 OR2L3Q8NG85 312 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 DCAKDQ8WVC6 231 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 LENG8Q96PV6 779 aaPredicted RBP10.17□□□□□ -0.78
COL4A6-203ENST00000394872 ZNF347Q96SE7 839 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 WRAP73Q9P2S5 460 aaPredicted RBP10.17□□□□□ -0.78
COL4A6-203ENST00000394872 ATXN10Q9UBB4 475 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 DUXAA6NLW8 204 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 PITPNM1O00562 1244 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 ERI3O43414 337 aaKnown RBP10.17□□□□□ -0.78
COL4A6-203ENST00000394872 KLK3P07288 261 aaPredicted RBP10.17□□□□□ -0.78
COL4A6-203ENST00000394872 PTX3P26022 381 aaPredicted RBP10.17□□□□□ -0.78
COL4A6-203ENST00000394872 ACVRL1P37023 503 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 SLC11A1P49279 550 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 KCNQ1P51787 676 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 MTPNP58546 118 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 MADCAM1Q13477 382 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 GPR68Q15743 365 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 OR2AP1Q8NGE2 309 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 OR6K6Q8NGW6 343 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 PHF12Q96QT6 1004 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 NTPCRQ9BSD7 190 aaKnown RBP10.17□□□□□ -0.78
COL4A6-203ENST00000394872 GATA5Q9BWX5 397 aaPredicted RBP10.17□□□□□ -0.78
COL4A6-203ENST00000394872 LDAHQ9H6V9 325 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 RAB26Q9ULW5 256 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 FZD9O00144 591 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 PCDHGA12O60330 932 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 PFKMP08237 780 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms