RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 ARVCFO00192 962 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 XPNPEP2O43895 674 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 CD36P16671 472 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 DCKP27707 260 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 ABRQ12979 859 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 OR4F3Q6IEY1 312 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 IFNL1Q8IU54 200 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 SPNS2Q8IVW8 549 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 PIANPQ8IYJ0 282 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 PROKR1Q8TCW9 393 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 HTRA1Q92743 480 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 COPS4Q9BT78 406 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 FUNDC2Q9BWH2 189 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 OSBPL10Q9BXB5 764 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 LHPPQ9H008 270 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 TNKS2Q9H2K2 1166 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 DYRK4Q9NR20 520 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 SLAMF8Q9P0V8 285 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 KIAA1522Q9P206 1035 aaPredicted RBP11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 TRPS1Q9UHF7 1281 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 EFCAB9A8MZ26 197 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 TNFRSF11BO00300 401 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 ARNTLO00327 626 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 SERPIND1P05546 499 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 RPL17P18621 184 aaKnown RBP11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 PPM1FP49593 454 aaPredicted RBP11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 CREB5Q02930 508 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 CAMK2GQ13555 558 aaPredicted RBP11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 PCBP2Q15366 365 aaKnown RBP eCLIP11.4□□□□□ -0.588e-8■■■□□ 15.4
UBE2D3-209ENST00000394804 CHRNA6Q15825 494 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 PHKG1Q16816 387 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 RFTN2Q52LD8 501 aaPredicted RBP11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 MORN1Q5T089 497 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 CASP12Q6UXS9 341 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 PTRH1Q86Y79 214 aaKnown RBP11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 PGBD5Q8N414 524 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 TTC9BQ8N6N2 239 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 PHF10Q8WUB8 498 aaKnown RBP11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 ASZ1Q8WWH4 475 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 ZNF641Q96N77 438 aaPredicted RBP11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 VPS35Q96QK1 796 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 BRINP2Q9C0B6 783 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 TRIM45Q9H8W5 580 aaPredicted RBP11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 HEBP1Q9NRV9 189 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 FLRT1Q9NZU1 646 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 KCNE2Q9Y6J6 123 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 EFCAB10A6NFE3 127 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 H3BN98 237 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 QSOX1O00391 747 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 ADAMDEC1O15204 470 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 B4GAT1O43505 415 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 CSKP41240 450 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 CD47Q08722 323 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 DEPDC1Q5TB30 811 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 RNF19BQ6ZMZ0 732 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 NEK10Q6ZWH5 1172 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 CYP2U1Q7Z449 544 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 ADCK2Q7Z695 626 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 DPP10Q8N608 796 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 KRTCAP2Q8N6L1 136 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 HTATIP2Q9BUP3 242 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 KCNH6Q9H252 994 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 TUBB1Q9H4B7 451 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 MRPL17Q9NRX2 175 aaKnown RBP11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 CLN6Q9NWW5 311 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 OSER1Q9NX31 292 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 EHD3Q9NZN3 535 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 LMCD1Q9NZU5 365 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 RUVBL1Q9Y265 456 aaKnown RBP11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 PCDHGA11Q9Y5H2 935 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 SLC1A7O00341 560 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 SNPHO15079 494 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 MTHFD2P13995 350 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 BMXP51813 675 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 PLEKHG6Q3KR16 790 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 ZDHHC20Q5W0Z9 365 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 PDE12Q6L8Q7 609 aaKnown RBP11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 TRIM40Q6P9F5 258 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 EIF3MQ7L2H7 374 aaKnown RBP11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 LRRC70Q7Z2Q7 622 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 SLC15A4Q8N697 577 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 PYCR2Q96C36 320 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 CEP295NLQ96MC4 621 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 CRNNQ9UBG3 495 aaPredicted RBP11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 BTBD3Q9Y2F9 522 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 OARD1Q9Y530 152 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 ACTL7AQ9Y615 435 aa11.4□□□□□ -0.58
UBE2D3-209ENST00000394804 TNFRSF10BO14763 440 aa11.39□□□□□ -0.59
UBE2D3-209ENST00000394804 GJB3O75712 270 aa11.39□□□□□ -0.59
UBE2D3-209ENST00000394804 UGT2B4P06133 528 aa11.39□□□□□ -0.59
UBE2D3-209ENST00000394804 CCDC159P0C7I6 412 aa11.39□□□□□ -0.59
UBE2D3-209ENST00000394804 ENGP17813 658 aa11.39□□□□□ -0.59
UBE2D3-209ENST00000394804 RPL3P39023 403 aaKnown RBP11.39□□□□□ -0.59
UBE2D3-209ENST00000394804 SEPHS1P49903 392 aa11.39□□□□□ -0.59
UBE2D3-209ENST00000394804 PON2Q15165 354 aa11.39□□□□□ -0.59
UBE2D3-209ENST00000394804 GPR153Q6NV75 609 aa11.39□□□□□ -0.59
UBE2D3-209ENST00000394804 DEFB128Q7Z7B8 93 aa11.39□□□□□ -0.59
UBE2D3-209ENST00000394804 OR4A15Q8NGL6 344 aa11.39□□□□□ -0.59
UBE2D3-209ENST00000394804 OTUB1Q96FW1 271 aaPredicted RBP11.39□□□□□ -0.59
UBE2D3-209ENST00000394804 SGK2Q9HBY8 427 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms