RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 TOR1AIP1Q5JTV8 583 aa18.45■□□□□ 0.54
HOXC6-202ENST00000394331 ESRP1Q6NXG1 681 aaKnown RBP18.45■□□□□ 0.54
HOXC6-202ENST00000394331 HS3ST5Q8IZT8 346 aa18.45■□□□□ 0.54
HOXC6-202ENST00000394331 TP53I13Q8NBR0 393 aaPredicted RBP18.45■□□□□ 0.54
HOXC6-202ENST00000394331 FRS2Q8WU20 508 aa18.45■□□□□ 0.54
HOXC6-202ENST00000394331 TBC1D20Q96BZ9 403 aa18.45■□□□□ 0.54
HOXC6-202ENST00000394331 SLC47A1Q96FL8 570 aa18.45■□□□□ 0.54
HOXC6-202ENST00000394331 SLC30A2Q9BRI3 323 aa18.45■□□□□ 0.54
HOXC6-202ENST00000394331 AASDHPPTQ9NRN7 309 aa18.45■□□□□ 0.54
HOXC6-202ENST00000394331 TLR6Q9Y2C9 796 aa18.45■□□□□ 0.54
HOXC6-202ENST00000394331 A0A075B6Q4 140 aa18.45■□□□□ 0.54
HOXC6-202ENST00000394331 FAM234BA2RU67 622 aa18.45■□□□□ 0.54
HOXC6-202ENST00000394331 CPNE3O75131 537 aaKnown RBP18.45■□□□□ 0.54
HOXC6-202ENST00000394331 SLC22A3O75751 556 aa18.45■□□□□ 0.54
HOXC6-202ENST00000394331 CDK14O94921 469 aa18.45■□□□□ 0.54
HOXC6-202ENST00000394331 CYBBP04839 570 aa18.45■□□□□ 0.54
HOXC6-202ENST00000394331 LCKP06239 509 aa18.45■□□□□ 0.54
HOXC6-202ENST00000394331 CTSHP09668 335 aa18.45■□□□□ 0.54
HOXC6-202ENST00000394331 ZNF30P17039 623 aa18.45■□□□□ 0.54
HOXC6-202ENST00000394331 ADRA1AP35348 466 aa18.45■□□□□ 0.54
HOXC6-202ENST00000394331 POLR2JP52435 117 aaKnown RBP18.45■□□□□ 0.54
HOXC6-202ENST00000394331 SLAMF1Q13291 335 aa18.45■□□□□ 0.54
HOXC6-202ENST00000394331 TBCEQ15813 527 aaPredicted RBP18.45■□□□□ 0.54
HOXC6-202ENST00000394331 MANEALQ5VSG8 457 aa18.45■□□□□ 0.54
HOXC6-202ENST00000394331 LAIR1Q6GTX8 287 aa18.45■□□□□ 0.54
HOXC6-202ENST00000394331 SLC46A3Q7Z3Q1 461 aa18.45■□□□□ 0.54
HOXC6-202ENST00000394331 HDDC2Q7Z4H3 204 aa18.45■□□□□ 0.54
HOXC6-202ENST00000394331 THEM5Q8N1Q8 247 aa18.45■□□□□ 0.54
HOXC6-202ENST00000394331 TCAIMQ8N3R3 496 aa18.45■□□□□ 0.54
HOXC6-202ENST00000394331 NEDD4LQ96PU5 975 aa18.45■□□□□ 0.54
HOXC6-202ENST00000394331 PKMYT1Q99640 499 aa18.45■□□□□ 0.54
HOXC6-202ENST00000394331 FSD1LQ9BXM9 530 aa18.45■□□□□ 0.54
HOXC6-202ENST00000394331 PRKD2Q9BZL6 878 aa18.45■□□□□ 0.54
HOXC6-202ENST00000394331 CARS2Q9HA77 564 aaKnown RBP18.45■□□□□ 0.54
HOXC6-202ENST00000394331 TMLHEQ9NVH6 421 aa18.45■□□□□ 0.54
HOXC6-202ENST00000394331 RBM22Q9NW64 420 aaKnown RBP eCLIP18.45■□□□□ 0.54
HOXC6-202ENST00000394331 STX7O15400 261 aaKnown RBP18.44■□□□□ 0.54
HOXC6-202ENST00000394331 ZNF623O75123 536 aa18.44■□□□□ 0.54
HOXC6-202ENST00000394331 OR7A10O76100 309 aa18.44■□□□□ 0.54
HOXC6-202ENST00000394331 AKR1A1P14550 325 aa18.44■□□□□ 0.54
HOXC6-202ENST00000394331 HLA-DMAP28067 261 aa18.44■□□□□ 0.54
HOXC6-202ENST00000394331 GZMKP49863 264 aa18.44■□□□□ 0.54
HOXC6-202ENST00000394331 EFR3AQ14156 821 aa18.44■□□□□ 0.54
HOXC6-202ENST00000394331 GBX1Q14549 363 aa18.44■□□□□ 0.54
HOXC6-202ENST00000394331 SYVN1Q86TM6 617 aa18.44■□□□□ 0.54
HOXC6-202ENST00000394331 LRRC20Q8TCA0 184 aa18.44■□□□□ 0.54
HOXC6-202ENST00000394331 FCRL2Q96LA5 508 aaPredicted RBP18.44■□□□□ 0.54
HOXC6-202ENST00000394331 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.44■□□□□ 0.54
HOXC6-202ENST00000394331 TUBB1Q9H4B7 451 aa18.44■□□□□ 0.54
HOXC6-202ENST00000394331 TIGARQ9NQ88 270 aa18.44■□□□□ 0.54
HOXC6-202ENST00000394331 SLC9A3R1O14745 358 aaPredicted RBP18.44■□□□□ 0.54
HOXC6-202ENST00000394331 FAM20BO75063 409 aa18.44■□□□□ 0.54
HOXC6-202ENST00000394331 IL1RNP18510 177 aa18.44■□□□□ 0.54
HOXC6-202ENST00000394331 GADD45AP24522 165 aa18.44■□□□□ 0.54
HOXC6-202ENST00000394331 SOX6P35712 828 aa18.44■□□□□ 0.54
HOXC6-202ENST00000394331 TALDO1P37837 337 aa18.44■□□□□ 0.54
HOXC6-202ENST00000394331 BRCC3P46736 316 aa18.44■□□□□ 0.54
HOXC6-202ENST00000394331 KIAA0930Q6ICG6 404 aaPredicted RBP18.44■□□□□ 0.54
HOXC6-202ENST00000394331 OR8J3Q8NGG0 315 aa18.44■□□□□ 0.54
HOXC6-202ENST00000394331 SCAMP5Q8TAC9 235 aa18.44■□□□□ 0.54
HOXC6-202ENST00000394331 METTL2AQ96IZ6 378 aaKnown RBP18.44■□□□□ 0.54
HOXC6-202ENST00000394331 FYTTD1Q96QD9 318 aaKnown RBP18.44■□□□□ 0.54
HOXC6-202ENST00000394331 ACTR8Q9H981 624 aa18.44■□□□□ 0.54
HOXC6-202ENST00000394331 C3orf14Q9HBI5 128 aa18.44■□□□□ 0.54
HOXC6-202ENST00000394331 MAT2BQ9NZL9 334 aa18.44■□□□□ 0.54
HOXC6-202ENST00000394331 GIMAP2Q9UG22 337 aa18.44■□□□□ 0.54
HOXC6-202ENST00000394331 TRMT6Q9UJA5 497 aaKnown RBP18.44■□□□□ 0.54
HOXC6-202ENST00000394331 STOML2Q9UJZ1 356 aa18.44■□□□□ 0.54
HOXC6-202ENST00000394331 NUP205Q92621 2012 aa18.44■□□□□ 0.54
HOXC6-202ENST00000394331 COL4A4P53420 1690 aaPredicted RBP18.43■□□□□ 0.54
HOXC6-202ENST00000394331 LINC00862A6NCI5 91 aa18.43■□□□□ 0.54
HOXC6-202ENST00000394331 WISP3O95389 354 aaPredicted RBP18.43■□□□□ 0.54
HOXC6-202ENST00000394331 RPLP2P05387 115 aaKnown RBP18.43■□□□□ 0.54
HOXC6-202ENST00000394331 NAT2P11245 290 aa18.43■□□□□ 0.54
HOXC6-202ENST00000394331 CLCN5P51795 746 aa18.43■□□□□ 0.54
HOXC6-202ENST00000394331 FBXO43Q4G163 708 aa18.43■□□□□ 0.54
HOXC6-202ENST00000394331 RBM20Q5T481 1227 aaKnown RBP18.43■□□□□ 0.54
HOXC6-202ENST00000394331 OVOS1Q6IE37 1185 aa18.43■□□□□ 0.54
HOXC6-202ENST00000394331 ASAH2Q9NR71 780 aa18.43■□□□□ 0.54
HOXC6-202ENST00000394331 TREX1Q9NSU2 369 aa18.43■□□□□ 0.54
HOXC6-202ENST00000394331 IL20Q9NYY1 176 aa18.43■□□□□ 0.54
HOXC6-202ENST00000394331 M0QZQ0 153 aa18.43■□□□□ 0.54
HOXC6-202ENST00000394331 M0R082 166 aa18.43■□□□□ 0.54
HOXC6-202ENST00000394331 DUSP11O75319 330 aaKnown RBP18.43■□□□□ 0.54
HOXC6-202ENST00000394331 PMPCBO75439 489 aa18.43■□□□□ 0.54
HOXC6-202ENST00000394331 MLLT6P55198 1093 aaPredicted RBP18.43■□□□□ 0.54
HOXC6-202ENST00000394331 MAD2L1BPQ15013 274 aaPredicted RBP18.43■□□□□ 0.54
HOXC6-202ENST00000394331 NKG7Q16617 165 aa18.43■□□□□ 0.54
HOXC6-202ENST00000394331 PROX2Q3B8N5 592 aa18.43■□□□□ 0.54
HOXC6-202ENST00000394331 PAN2Q504Q3 1202 aaKnown RBP18.43■□□□□ 0.54
HOXC6-202ENST00000394331 GNASQ5JWF2 1037 aa18.43■□□□□ 0.54
HOXC6-202ENST00000394331 ANKRD34AQ69YU3 496 aa18.43■□□□□ 0.54
HOXC6-202ENST00000394331 RANBP10Q6VN20 620 aa18.43■□□□□ 0.54
HOXC6-202ENST00000394331 EFL1Q7Z2Z2 1120 aaKnown RBP18.43■□□□□ 0.54
HOXC6-202ENST00000394331 DEDD2Q8WXF8 326 aa18.43■□□□□ 0.54
HOXC6-202ENST00000394331 GLTPQ9NZD2 209 aa18.43■□□□□ 0.54
HOXC6-202ENST00000394331 SLAMF8Q9P0V8 285 aa18.43■□□□□ 0.54
HOXC6-202ENST00000394331 ARNTLO00327 626 aa18.43■□□□□ 0.54
HOXC6-202ENST00000394331 CA12O43570 354 aa18.43■□□□□ 0.54
HOXC6-202ENST00000394331 POMCP01189 267 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms