RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 CARD6Q9BX69 1037 aa16.82■□□□□ 0.28
SNRPA1-202ENST00000394082 CASS4Q9NQ75 786 aa16.82■□□□□ 0.28
SNRPA1-202ENST00000394082 LUZP4Q9P127 313 aa16.82■□□□□ 0.28
SNRPA1-202ENST00000394082 CDYLQ9Y232 598 aa16.82■□□□□ 0.28
SNRPA1-202ENST00000394082 ITPR2Q14571 2701 aa16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 A0A1B0GX78 115 aa16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 OR51F1A6NGY5 319 aa16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 SLCO2B1O94956 709 aa16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 RNF224P0DH78 156 aa16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 CD9P21926 228 aa16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 ADRA1DP25100 572 aa16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 CCR7P32248 378 aa16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 FDFT1P37268 417 aa16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 RAPSNQ13702 412 aa16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 BRD3Q15059 726 aa16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 CYP2A13Q16696 494 aa16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 ZC3H12BQ5HYM0 836 aaKnown RBP16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 TCTE1Q5JU00 501 aa16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 TSTD2Q5T7W7 516 aa16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 RAD9BQ6WBX8 426 aa16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 MICALCLQ6ZW33 695 aa16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 OVCH1Q7RTY7 1134 aa16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 MCATQ8IVS2 390 aaKnown RBP16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 DCUN1D3Q8IWE4 304 aa16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 ZADH2Q8N4Q0 377 aa16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 DNAAF3Q8N9W5 541 aa16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 LINC01555Q8NAE3 123 aa16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 OR52K1Q8NGK4 314 aa16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 OR4L1Q8NH43 312 aa16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 PRR7Q8TB68 274 aa16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 HDAC10Q969S8 669 aa16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 C19orf60Q96EN9 201 aa16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 ZNF285Q96NJ3 590 aa16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 MRM3Q9HC36 420 aaKnown RBP16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 SLC22A11Q9NSA0 550 aa16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 INTS7Q9NVH2 962 aaKnown RBP16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 ASF1BQ9NVP2 202 aa16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 PIH1D1Q9NWS0 290 aaKnown RBP16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 IL1RAPL1Q9NZN1 696 aa16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 NXT1Q9UKK6 140 aaKnown RBP16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 R3HDM2Q9Y2K5 976 aaKnown RBP16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 CRYBG3Q68DQ2 2970 aa16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 CELSR2Q9HCU4 2923 aa16.81■□□□□ 0.28
SNRPA1-202ENST00000394082 CCDC88CQ9P219 2028 aa16.8■□□□□ 0.28
SNRPA1-202ENST00000394082 KRT86O43790 486 aa16.8■□□□□ 0.28
SNRPA1-202ENST00000394082 OR1I1O60431 355 aa16.8■□□□□ 0.28
SNRPA1-202ENST00000394082 GOT2P00505 430 aaKnown RBP16.8■□□□□ 0.28
SNRPA1-202ENST00000394082 LDLRP01130 860 aa16.8■□□□□ 0.28
SNRPA1-202ENST00000394082 CTSBP07858 339 aa16.8■□□□□ 0.28
SNRPA1-202ENST00000394082 MAGP20916 626 aa16.8■□□□□ 0.28
SNRPA1-202ENST00000394082 NR6A1Q15406 480 aa16.8■□□□□ 0.28
SNRPA1-202ENST00000394082 CCDC38Q502W7 563 aa16.8■□□□□ 0.28
SNRPA1-202ENST00000394082 AARS2Q5JTZ9 985 aaKnown RBP16.8■□□□□ 0.28
SNRPA1-202ENST00000394082 IGFL2Q6UWQ7 119 aa16.8■□□□□ 0.28
SNRPA1-202ENST00000394082 MAMDC2Q7Z304 686 aaPredicted RBP16.8■□□□□ 0.28
SNRPA1-202ENST00000394082 OR2L8Q8NGY9 312 aa16.8■□□□□ 0.28
SNRPA1-202ENST00000394082 ZUFSPQ96AP4 578 aa16.8■□□□□ 0.28
SNRPA1-202ENST00000394082 HES6Q96HZ4 224 aa16.8■□□□□ 0.28
SNRPA1-202ENST00000394082 RAB11FIP5Q9BXF6 653 aa16.8■□□□□ 0.28
SNRPA1-202ENST00000394082 ILKAPQ9H0C8 392 aaPredicted RBP16.8■□□□□ 0.28
SNRPA1-202ENST00000394082 MAP10Q9P2G4 905 aa16.8■□□□□ 0.28
SNRPA1-202ENST00000394082 SLC5A6Q9Y289 635 aa16.8■□□□□ 0.28
SNRPA1-202ENST00000394082 PCDHGA10Q9Y5H3 936 aa16.8■□□□□ 0.28
SNRPA1-202ENST00000394082 KLK4Q9Y5K2 254 aa16.8■□□□□ 0.28
SNRPA1-202ENST00000394082 MRFAP1Q9Y605 127 aa16.8■□□□□ 0.28
SNRPA1-202ENST00000394082 CENPEQ02224 2701 aa16.8■□□□□ 0.28
SNRPA1-202ENST00000394082 NUP210LQ5VU65 1888 aa16.8■□□□□ 0.28
SNRPA1-202ENST00000394082 SNRNP200O75643 2136 aaKnown RBP16.79■□□□□ 0.28
SNRPA1-202ENST00000394082 FITM1A5D6W6 292 aa16.79■□□□□ 0.28
SNRPA1-202ENST00000394082 TARM1B6A8C7 271 aa16.79■□□□□ 0.28
SNRPA1-202ENST00000394082 DSCR3O14972 297 aa16.79■□□□□ 0.28
SNRPA1-202ENST00000394082 APOA4P06727 396 aa16.79■□□□□ 0.28
SNRPA1-202ENST00000394082 HSPA14Q0VDF9 509 aa16.79■□□□□ 0.28
SNRPA1-202ENST00000394082 KIF5AQ12840 1032 aa16.79■□□□□ 0.28
SNRPA1-202ENST00000394082 GRB7Q14451 532 aa16.79■□□□□ 0.28
SNRPA1-202ENST00000394082 GRM7Q14831 915 aa16.79■□□□□ 0.28
SNRPA1-202ENST00000394082 OASLQ15646 514 aaKnown RBP16.79■□□□□ 0.28
SNRPA1-202ENST00000394082 NAPRTQ6XQN6 538 aa16.79■□□□□ 0.28
SNRPA1-202ENST00000394082 ZNF534Q76KX8 674 aa16.79■□□□□ 0.28
SNRPA1-202ENST00000394082 CISD2Q8N5K1 135 aaKnown RBP16.79■□□□□ 0.28
SNRPA1-202ENST00000394082 PPP4R1Q8TF05 950 aa16.79■□□□□ 0.28
SNRPA1-202ENST00000394082 VPS50Q96JG6 964 aa16.79■□□□□ 0.28
SNRPA1-202ENST00000394082 ETNK1Q9HBU6 452 aa16.79■□□□□ 0.28
SNRPA1-202ENST00000394082 IRAK4Q9NWZ3 460 aa16.79■□□□□ 0.28
SNRPA1-202ENST00000394082 IMPACTQ9P2X3 320 aa16.79■□□□□ 0.28
SNRPA1-202ENST00000394082 ERRFI1Q9UJM3 462 aaPredicted RBP16.79■□□□□ 0.28
SNRPA1-202ENST00000394082 PLAGL1Q9UM63 463 aa16.79■□□□□ 0.28
SNRPA1-202ENST00000394082 COPG1Q9Y678 874 aaKnown RBP16.79■□□□□ 0.28
SNRPA1-202ENST00000394082 ANKUB1A6NFN9 424 aa16.78■□□□□ 0.28
SNRPA1-202ENST00000394082 RASGRF2O14827 1237 aa16.78■□□□□ 0.28
SNRPA1-202ENST00000394082 PRICKLE3O43900 615 aaPredicted RBP16.78■□□□□ 0.28
SNRPA1-202ENST00000394082 SRPX2O60687 465 aaPredicted RBP16.78■□□□□ 0.28
SNRPA1-202ENST00000394082 ITGAXP20702 1163 aa16.78■□□□□ 0.28
SNRPA1-202ENST00000394082 ALAS2P22557 587 aa16.78■□□□□ 0.28
SNRPA1-202ENST00000394082 AOAHP28039 575 aa16.78■□□□□ 0.28
SNRPA1-202ENST00000394082 TTPAP49638 278 aa16.78■□□□□ 0.28
SNRPA1-202ENST00000394082 ZNF75DP51815 510 aa16.78■□□□□ 0.28
SNRPA1-202ENST00000394082 PRAMEP78395 509 aa16.78■□□□□ 0.28
SNRPA1-202ENST00000394082 NKG7Q16617 165 aa16.78■□□□□ 0.28
SNRPA1-202ENST00000394082 FAM214AQ32MH5 1076 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms