RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 ABCF3Q9NUQ8 709 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 WHRNQ9P202 907 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 RARRES3Q9UL19 164 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 SLC39A10Q9ULF5 831 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 BTRCQ9Y297 605 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 VPS9D1Q9Y2B5 631 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 PSAT1Q9Y617 370 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 MRPS18BQ9Y676 258 aaKnown RBP7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 UNC13CQ8NB66 2214 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 CHD6Q8TD26 2715 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 MGAQ8IWI9 3026 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 A0A0J9YY10 115 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 CXorf49A8MYA2 514 aaPredicted RBP7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 TMEM150CB9EJG8 249 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 E7ESA3 106 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 K7ENP7 123 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 SMAPO00193 183 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 MATN2O00339 956 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 VPS26AO75436 327 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 SCRG1O75711 98 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 MATN4O95460 622 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 SYF2O95926 243 aaKnown RBP7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 RPN2P04844 631 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 MAGP20916 626 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 SAT1P21673 171 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 CD9P21926 228 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 F8A1P23610 371 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 SSTR1P30872 391 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 ATP1A2P50993 1020 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 TUBB4BP68371 445 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 ACY1Q03154 408 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 TSTA3Q13630 321 aaPredicted RBP7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 TUBB2AQ13885 445 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 ZNF460Q14592 562 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 IL11RAQ14626 422 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 WHAMMP3Q1A5X7 153 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 TMTC4Q5T4D3 741 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 UBAP2Q5T6F2 1119 aaKnown RBP7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 ATP1A1-AS1Q5TC04 95 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 HECTD2Q5U5R9 776 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 FAM69BQ5VUD6 431 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 C8orf74Q6P047 294 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 FAM199XQ6PEV8 388 aaPredicted RBP7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 INO80CQ6PI98 192 aaPredicted RBP7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 PAQR3Q6TCH7 311 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 MBOAT1Q6ZNC8 495 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 GPR155Q7Z3F1 870 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 KMT5CQ86Y97 462 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 TMEM126BQ8IUX1 230 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 LMNTD2Q8IXW0 634 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 C19orf47Q8N9M1 422 aaKnown RBP7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 SLC38A9Q8NBW4 561 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 BBOF1Q8ND07 529 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 PPFIBP2Q8ND30 876 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 OR2L8Q8NGY9 312 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 FBXO25Q8TCJ0 367 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 EEF1AKMT1Q8WVE0 214 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 INPP5DQ92835 1189 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 RAD51AP1Q96B01 352 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 TRIM44Q96DX7 344 aaPredicted RBP7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 FOPNLQ96NB1 174 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 PKP4Q99569 1192 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 OLFM1Q99784 485 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 MIPEPQ99797 713 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 ZPBPQ9BS86 351 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 NAT9Q9BTE0 207 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 TUBB2BQ9BVA1 445 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 ACAT2Q9BWD1 397 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 B3GNT4Q9C0J1 378 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 PDE7BQ9NP56 450 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 OR6C2Q9NZP2 312 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 IL17BQ9UHF5 180 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 TRMT6Q9UJA5 497 aaKnown RBP7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 ADAMTS6Q9UKP5 1117 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 DHRS7Q9Y394 339 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 UTP11Q9Y3A2 253 aaKnown RBP7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 TMEM184BQ9Y519 407 aaPredicted RBP7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 MRFAP1Q9Y605 127 aa7.4□□□□□ -1.22
HMGB3P1-201ENST00000393368 CACNA1BQ00975 2339 aa7.4□□□□□ -1.23
HMGB3P1-201ENST00000393368 ZFYVE26Q68DK2 2539 aa7.4□□□□□ -1.23
HMGB3P1-201ENST00000393368 ATMQ13315 3056 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 KNTC1P50748 2209 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 SDK2Q58EX2 2172 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 A0A1W2PPV9 198 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 PSIP1O75475 530 aaKnown RBP7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 NUDT7P0C024 238 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 PRKAR1AP10644 381 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 ATP5DP30049 168 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 DLSTP36957 453 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 STAT5AP42229 794 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 GRIA3P42263 894 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 UCNP55089 124 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 GPX6P59796 221 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 GUCY2DQ02846 1103 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 MGAT5Q09328 741 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 GPS2Q13227 327 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 KIR2DS3Q14952 304 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 EFTUD2Q15029 972 aaKnown RBP eCLIP7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 SF1Q15637 639 aaKnown RBP7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 TTLL9Q3SXZ7 439 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms