RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 VMP1Q96GC9 406 aa16■□□□□ 0.15
PHTF1-205ENST00000393357 CNPPD1Q9BV87 410 aa16■□□□□ 0.15
PHTF1-205ENST00000393357 SIRT5Q9NXA8 310 aa16■□□□□ 0.15
PHTF1-205ENST00000393357 HCAR3P49019 387 aa16■□□□□ 0.15
PHTF1-205ENST00000393357 STC1P52823 247 aa16■□□□□ 0.15
PHTF1-205ENST00000393357 VLDLRP98155 873 aa16■□□□□ 0.15
PHTF1-205ENST00000393357 FOXM1Q08050 763 aa16■□□□□ 0.15
PHTF1-205ENST00000393357 CAMKK1Q8N5S9 505 aa16■□□□□ 0.15
PHTF1-205ENST00000393357 DTX3Q8N9I9 347 aa16■□□□□ 0.15
PHTF1-205ENST00000393357 KCTD13Q8WZ19 329 aa16■□□□□ 0.15
PHTF1-205ENST00000393357 TMEM203Q969S6 136 aa16■□□□□ 0.15
PHTF1-205ENST00000393357 GPRC5BQ9NZH0 403 aa16■□□□□ 0.15
PHTF1-205ENST00000393357 ZNF490Q9ULM2 529 aaPredicted RBP16■□□□□ 0.15
PHTF1-205ENST00000393357 GABRQQ9UN88 632 aa16■□□□□ 0.15
PHTF1-205ENST00000393357 PCDHGB6Q9Y5F9 930 aa16■□□□□ 0.15
PHTF1-205ENST00000393357 ITGB1P05556 798 aa15.99■□□□□ 0.15
PHTF1-205ENST00000393357 MMP2P08253 660 aa15.99■□□□□ 0.15
PHTF1-205ENST00000393357 MSH3P20585 1137 aa15.99■□□□□ 0.15
PHTF1-205ENST00000393357 INTS6LQ5JSJ4 861 aaKnown RBP15.99■□□□□ 0.15
PHTF1-205ENST00000393357 CEP78Q5JTW2 689 aa15.99■□□□□ 0.15
PHTF1-205ENST00000393357 SDE2Q6IQ49 451 aa15.99■□□□□ 0.15
PHTF1-205ENST00000393357 AMER2Q8N7J2 671 aa15.99■□□□□ 0.15
PHTF1-205ENST00000393357 RTL3Q8N8U3 475 aaKnown RBP15.99■□□□□ 0.15
PHTF1-205ENST00000393357 MYEOVQ96EZ4 313 aa15.99■□□□□ 0.15
PHTF1-205ENST00000393357 APOL4Q9BPW4 351 aa15.99■□□□□ 0.15
PHTF1-205ENST00000393357 NFKBIZQ9BYH8 718 aa15.99■□□□□ 0.15
PHTF1-205ENST00000393357 NECTIN3Q9NQS3 549 aa15.99■□□□□ 0.15
PHTF1-205ENST00000393357 TYW5A2RUC4 315 aaKnown RBP15.99■□□□□ 0.15
PHTF1-205ENST00000393357 KMOO15229 486 aa15.99■□□□□ 0.15
PHTF1-205ENST00000393357 VPS26AO75436 327 aa15.99■□□□□ 0.15
PHTF1-205ENST00000393357 SCO1O75880 301 aa15.99■□□□□ 0.15
PHTF1-205ENST00000393357 TACR1P25103 407 aa15.99■□□□□ 0.15
PHTF1-205ENST00000393357 MC4RP32245 332 aa15.99■□□□□ 0.15
PHTF1-205ENST00000393357 TSTA3Q13630 321 aaPredicted RBP15.99■□□□□ 0.15
PHTF1-205ENST00000393357 SUSD1Q6UWL2 747 aa15.99■□□□□ 0.15
PHTF1-205ENST00000393357 GOLGA7Q7Z5G4 137 aa15.99■□□□□ 0.15
PHTF1-205ENST00000393357 GLCCI1Q86VQ1 547 aa15.99■□□□□ 0.15
PHTF1-205ENST00000393357 GFM1Q96RP9 751 aaKnown RBP15.99■□□□□ 0.15
PHTF1-205ENST00000393357 BTBD2Q9BX70 525 aa15.99■□□□□ 0.15
PHTF1-205ENST00000393357 THG1LQ9NWX6 298 aaKnown RBP15.99■□□□□ 0.15
PHTF1-205ENST00000393357 OSER1Q9NX31 292 aa15.99■□□□□ 0.15
PHTF1-205ENST00000393357 WWOXQ9NZC7 414 aa15.99■□□□□ 0.15
PHTF1-205ENST00000393357 RPP40O75818 363 aaKnown RBP15.98■□□□□ 0.15
PHTF1-205ENST00000393357 MYL3P08590 195 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 CKMT1AP12532 417 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 SMPD1P17405 629 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 CTSKP43235 329 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 DEFA1P59665 94 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 DEFA3P59666 94 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 TOP3AQ13472 1001 aaPredicted RBP15.98■□□□□ 0.15
PHTF1-205ENST00000393357 COL9A2Q14055 689 aaPredicted RBP15.98■□□□□ 0.15
PHTF1-205ENST00000393357 ARMCX4Q5H9R4 360 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 OR4F3Q6IEY1 312 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 ERAP2Q6P179 960 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 KLHL17Q6TDP4 642 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 EFHD2Q96C19 240 aaPredicted RBP15.98■□□□□ 0.15
PHTF1-205ENST00000393357 YIPF6Q96EC8 236 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 TFB2MQ9H5Q4 396 aaKnown RBP15.98■□□□□ 0.15
PHTF1-205ENST00000393357 SNTG1Q9NSN8 517 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 TEKT2Q9UIF3 430 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 WWP2O00308 870 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 SMIM10L2AP0DMW4 78 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 SMIM10L2BP0DMW5 78 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 WARSP23381 471 aaKnown RBP15.98■□□□□ 0.15
PHTF1-205ENST00000393357 DNAJB2P25686 324 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 RGRP47804 291 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 SYCE2Q6PIF2 218 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 BHLHA9Q7RTU4 235 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 CCDC71Q8IV32 467 aaPredicted RBP15.98■□□□□ 0.15
PHTF1-205ENST00000393357 MSRB3Q8IXL7 192 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 ATP6V0D2Q8N8Y2 350 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 SUN5Q8TC36 379 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 GTPBP3Q969Y2 492 aaKnown RBP15.98■□□□□ 0.15
PHTF1-205ENST00000393357 TXNDC15Q96J42 360 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 CNDP2Q96KP4 475 aaKnown RBP15.98■□□□□ 0.15
PHTF1-205ENST00000393357 ASB2Q96Q27 587 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 ITPAQ9BY32 194 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 E2F3O00716 465 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 RAMP2O60895 175 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 SLC15A1P46059 708 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 GTF2H2Q13888 395 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 SETMARQ53H47 684 aaPredicted RBP15.98■□□□□ 0.15
PHTF1-205ENST00000393357 CPZQ66K79 652 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 GTF2H2CQ6P1K8 395 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 CYP4Z2PQ8N1L4 340 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 SETD9Q8NE22 299 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 DPF3Q92784 378 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 TSGA13Q96PP4 275 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 FBXO8Q9NRD0 319 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 TOR4AQ9NXH8 423 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 TAS2R9Q9NYW1 312 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 MED16Q9Y2X0 877 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 PRKAB1Q9Y478 270 aa15.98■□□□□ 0.15
PHTF1-205ENST00000393357 RFXAPO00287 272 aa15.97■□□□□ 0.15
PHTF1-205ENST00000393357 GPR32O75388 356 aa15.97■□□□□ 0.15
PHTF1-205ENST00000393357 PTHP01270 115 aa15.97■□□□□ 0.15
PHTF1-205ENST00000393357 NUDT7P0C024 238 aa15.97■□□□□ 0.15
PHTF1-205ENST00000393357 ATXN1LP0C7T5 689 aaKnown RBP15.97■□□□□ 0.15
PHTF1-205ENST00000393357 PRKCAP17252 672 aa15.97■□□□□ 0.15
PHTF1-205ENST00000393357 SLC19A1P41440 591 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms