RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 SAMSN1Q9NSI8 373 aaKnown RBP3.46□□□□□ -1.86
XRN1-202ENST00000392981 EHD3Q9NZN3 535 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 NCKIPSDQ9NZQ3 722 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 THEGQ9P2T0 379 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 ERVK-18Q9QC07 812 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 NPIPA1Q9UND3 350 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 OR10H1Q9Y4A9 318 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 CDC42BPAQ5VT25 1732 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 CEP350Q5VT06 3117 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 CCDC160A6NGH7 325 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 H3BQV1 296 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 K7ERQ8 282 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 B4GAT1O43505 415 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 JRKO75564 520 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 FARP2O94887 1054 aaPredicted RBP3.46□□□□□ -1.86
XRN1-202ENST00000392981 IGHEP01854 428 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 RHOP08100 348 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 LINGO3P0C6S8 592 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 B4GALT1P15291 398 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 HSD17B3P37058 310 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 HTR2BP41595 481 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 ITIH3Q06033 890 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 SLC34A1Q06495 639 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 HNF4GQ14541 408 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 C6orf136Q5SQH8 315 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 NCR3LG1Q68D85 454 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 PRSS42Q7Z5A4 293 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 SYVN1Q86TM6 617 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 HACE1Q8IYU2 909 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 MARVELD2Q8N4S9 558 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 LRRC57Q8N9N7 239 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 STXBP6Q8NFX7 210 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 OR2T34Q8NGX1 318 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 FAR1Q8WVX9 515 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 HOXB13Q92826 284 aaPredicted RBP3.46□□□□□ -1.86
XRN1-202ENST00000392981 NAPGQ99747 312 aaPredicted RBP3.46□□□□□ -1.86
XRN1-202ENST00000392981 SIRPDQ9H106 197 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 EXO5Q9H790 373 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 VSX1Q9NZR4 365 aaPredicted RBP3.46□□□□□ -1.86
XRN1-202ENST00000392981 STX18Q9P2W9 335 aaKnown RBP3.46□□□□□ -1.86
XRN1-202ENST00000392981 DDX19BQ9UMR2 479 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 LOC100653049A0A140TA62 436 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 A8MU76 341 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 PSMD11O00231 422 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 KRT34O76011 436 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 IL18BPO95998 194 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 APOA1P02647 267 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 MTNR1AP48039 350 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 HNRNPH2P55795 449 aaKnown RBP3.46□□□□□ -1.86
XRN1-202ENST00000392981 SKP1P63208 163 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 RESTQ13127 1097 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 VEZF1Q14119 521 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 MFSD13AQ14CX5 517 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 TRIM60Q495X7 471 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 RAET1LQ5VY80 246 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 KANK2Q63ZY3 851 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 TPGS2Q68CL5 300 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 SNRNP48Q6IEG0 339 aaKnown RBP3.46□□□□□ -1.86
XRN1-202ENST00000392981 MFSD12Q6NUT3 480 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 DPY19L2P1Q6NXN4 242 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 ZNF852Q6ZMS4 543 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 STXBP4Q6ZWJ1 553 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 CLEC14AQ86T13 490 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 WDR5BQ86VZ2 330 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 FOXRED2Q8IWF2 684 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 Q8N1Y9 231 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 OR56B1Q8NGI3 324 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 SLC5A11Q8WWX8 675 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 OLFM1Q99784 485 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 NLNQ9BYT8 704 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 VCX3BQ9H321 246 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 CPNE5Q9HCH3 593 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 CD207Q9UJ71 328 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 DNPEPQ9ULA0 475 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 ZNF510Q9Y2H8 683 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 PAM16Q9Y3D7 125 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.46□□□□□ -1.865e-8■□□□□ 9.8
XRN1-202ENST00000392981 MAPK8IP3Q9UPT6 1336 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 OR14I1A6ND48 311 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 TBKBP1A7MCY6 615 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 AKR7A2O43488 359 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 ECDO95905 644 aaPredicted RBP3.46□□□□□ -1.86
XRN1-202ENST00000392981 ANKRD34CP0C6C1 535 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 HSMCR30P0CW71 290 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 S1PR1P21453 382 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 HOXD9P28356 352 aaPredicted RBP3.46□□□□□ -1.86
XRN1-202ENST00000392981 PPP2R1BP30154 601 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 THOP1P52888 689 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 TAS2R40P59535 323 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 UBE2HP62256 183 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 USP10Q14694 798 aaKnown RBP3.46□□□□□ -1.86
XRN1-202ENST00000392981 PDK3Q15120 406 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 PRICKLE4Q2TBC4 344 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 ALG10Q5BKT4 473 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 ALG10BQ5I7T1 473 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 CYP4A22Q5TCH4 519 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 CEP85Q6P2H3 762 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 FIGLAQ6QHK4 219 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 RPTNQ6XPR3 784 aa3.46□□□□□ -1.86
XRN1-202ENST00000392981 TGIF2LXQ8IUE1 241 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms