RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 PRORSD1PA6NEY8 169 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 RNASEH2AO75792 299 aaKnown RBP12.85□□□□□ -0.35
LCA5-202ENST00000392959 NFATC1O95644 943 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 S100GP29377 79 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 GGT5P36269 586 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 PSMD8P48556 350 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 MPP2Q14168 576 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 PAFAH1B3Q15102 231 aaKnown RBP12.85□□□□□ -0.35
LCA5-202ENST00000392959 SLC2A7Q6PXP3 512 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 NEK7Q8TDX7 302 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 ACDQ96AP0 544 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 IL4I1Q96RQ9 567 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 PCBD2Q9H0N5 130 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 MINDY3Q9H8M7 445 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 TMEM9Q9P0T7 183 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 FNIP2Q9P278 1114 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 FBXL21Q9UKT6 434 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 MKL2Q9ULH7 1088 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 GRIP1Q9Y3R0 1128 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 MYO5BQ9ULV0 1848 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 A0A1W2PQ72 361 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 PITPNM1O00562 1244 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 ENGP17813 658 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 IGFALSP35858 605 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 WASP42768 502 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 MLLT6P55198 1093 aaPredicted RBP12.85□□□□□ -0.35
LCA5-202ENST00000392959 SCARB2Q14108 478 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 FAAH2Q6GMR7 532 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 HFE2Q6ZVN8 426 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 SAMD14Q8IZD0 417 aaPredicted RBP12.85□□□□□ -0.35
LCA5-202ENST00000392959 CHST4Q8NCG5 386 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 SUN5Q8TC36 379 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 EFCAB11Q9BUY7 163 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 CLDN4O14493 209 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 ELNP15502 786 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 ATF6P18850 670 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 CASP9P55211 416 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 FRG2Q64ET8 278 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 OR4F3Q6IEY1 312 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 PSRC1Q6PGN9 363 aaPredicted RBP12.85□□□□□ -0.35
LCA5-202ENST00000392959 C12orf43Q96C57 262 aaKnown RBP12.85□□□□□ -0.35
LCA5-202ENST00000392959 RBM18Q96H35 190 aaKnown RBP12.85□□□□□ -0.35
LCA5-202ENST00000392959 CAMK1GQ96NX5 476 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 FRG2BQ96QU4 278 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 SLC32A1Q9H598 525 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 USP29Q9HBJ7 922 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 BAIAP2Q9UQB8 552 aa12.85□□□□□ -0.35
LCA5-202ENST00000392959 DAPL1A0PJW8 107 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 CDC7O00311 574 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 MATN4O95460 622 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 EOMESO95936 686 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 RPL17P18621 184 aaKnown RBP12.84□□□□□ -0.35
LCA5-202ENST00000392959 DCDC1P59894 354 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 SEMG2Q02383 582 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 IDNKQ5T6J7 187 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 XKR5Q6UX68 686 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 NAPRTQ6XQN6 538 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 RBM23Q86U06 439 aaKnown RBP12.84□□□□□ -0.35
LCA5-202ENST00000392959 PIM3Q86V86 326 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 TREML1Q86YW5 311 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 IGDCC3Q8IVU1 814 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 SLC30A8Q8IWU4 369 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 LCN9Q8WX39 176 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 COL21A1Q96P44 957 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 SLC22A4Q9H015 551 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 FZD4Q9ULV1 537 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 PSAT1Q9Y617 370 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 PSKH1P11801 424 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 GJA8P48165 433 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 STXBP1P61764 594 aaKnown RBP12.84□□□□□ -0.35
LCA5-202ENST00000392959 UFM1P61960 85 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 TCEAL1Q15170 157 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 RABL3Q5HYI8 236 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 SLC30A6Q6NXT4 461 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 OXR1Q8N573 874 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 PQLC3Q8N755 202 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 C2orf15Q8WU43 125 aaKnown RBP12.84□□□□□ -0.35
LCA5-202ENST00000392959 DDX1Q92499 740 aaKnown RBP12.84□□□□□ -0.35
LCA5-202ENST00000392959 BIRC7Q96CA5 298 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 CYP2S1Q96SQ9 504 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 IFT27Q9BW83 186 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 BHLHE41Q9C0J9 482 aaPredicted RBP12.84□□□□□ -0.35
LCA5-202ENST00000392959 LOC100130705A0A1B0GUX0 176 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 A0A1W2PPW3 197 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 PPEF2O14830 753 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 CCL16O15467 120 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 PAPSS2O95340 614 aaPredicted RBP12.84□□□□□ -0.35
LCA5-202ENST00000392959 KHKP50053 298 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 XKP51811 444 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 AP1S2P56377 157 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 NDUFA9Q16795 377 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 NPAS4Q8IUM7 802 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 FBXO22Q8NEZ5 403 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 SLC22A17Q8WUG5 538 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 CRELD1Q96HD1 420 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 KCTD7Q96MP8 289 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 LIN28AQ9H9Z2 209 aaKnown RBP12.84□□□□□ -0.35
LCA5-202ENST00000392959 SPATA7Q9P0W8 599 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 ERVW-1Q9UQF0 538 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 PRAMEF12O95522 483 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms