RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 SPHK1Q9NYA1 384 aa12.24□□□□□ -0.45
GGPS1-203ENST00000391855 TRMT6Q9UJA5 497 aaKnown RBP12.24□□□□□ -0.45
GGPS1-203ENST00000391855 CDC23Q9UJX2 597 aa12.24□□□□□ -0.45
GGPS1-203ENST00000391855 KCND3Q9UK17 655 aa12.24□□□□□ -0.45
GGPS1-203ENST00000391855 PADI1Q9ULC6 663 aa12.24□□□□□ -0.45
GGPS1-203ENST00000391855 SNX24Q9Y343 169 aa12.24□□□□□ -0.45
GGPS1-203ENST00000391855 DHRS7Q9Y394 339 aa12.24□□□□□ -0.45
GGPS1-203ENST00000391855 UTP11Q9Y3A2 253 aaKnown RBP12.24□□□□□ -0.45
GGPS1-203ENST00000391855 ZNF839A8K0R7 811 aa12.23□□□□□ -0.45
GGPS1-203ENST00000391855 KIF2AO00139 706 aaPredicted RBP12.23□□□□□ -0.45
GGPS1-203ENST00000391855 RAD51CO43502 376 aa12.23□□□□□ -0.45
GGPS1-203ENST00000391855 PSIP1O75475 530 aaKnown RBP12.23□□□□□ -0.45
GGPS1-203ENST00000391855 HAUS5O94927 633 aa12.23□□□□□ -0.45
GGPS1-203ENST00000391855 HBQ1P09105 142 aa12.23□□□□□ -0.45
GGPS1-203ENST00000391855 ERVK-10P10266 1014 aa12.23□□□□□ -0.45
GGPS1-203ENST00000391855 OAS2P29728 719 aaKnown RBP12.23□□□□□ -0.45
GGPS1-203ENST00000391855 HSD17B2P37059 387 aa12.23□□□□□ -0.45
GGPS1-203ENST00000391855 SKIV2L2P42285 1042 aaKnown RBP12.23□□□□□ -0.45
GGPS1-203ENST00000391855 BDKRB1P46663 353 aa12.23□□□□□ -0.45
GGPS1-203ENST00000391855 CARSP49589 748 aaKnown RBP12.23□□□□□ -0.45
GGPS1-203ENST00000391855 RGS4P49798 205 aa12.23□□□□□ -0.45
GGPS1-203ENST00000391855 PDIA2Q13087 525 aaKnown RBP12.23□□□□□ -0.45
GGPS1-203ENST00000391855 SRSF6Q13247 344 aaKnown RBP12.23□□□□□ -0.45
GGPS1-203ENST00000391855 ARHGAP19Q14CB8 494 aa12.23□□□□□ -0.45
GGPS1-203ENST00000391855 KLHL38Q2WGJ6 581 aa12.23□□□□□ -0.45
GGPS1-203ENST00000391855 GALNT6Q8NCL4 622 aa12.23□□□□□ -0.45
GGPS1-203ENST00000391855 FLVCR1-AS1Q8TAF5 88 aa12.23□□□□□ -0.45
GGPS1-203ENST00000391855 CD200R1Q8TD46 325 aa12.23□□□□□ -0.45
GGPS1-203ENST00000391855 N4BP2L2Q92802 583 aaPredicted RBP12.23□□□□□ -0.45
GGPS1-203ENST00000391855 FAM136AQ96C01 138 aa12.23□□□□□ -0.45
GGPS1-203ENST00000391855 CFAP36Q96G28 342 aa12.23□□□□□ -0.45
GGPS1-203ENST00000391855 C16orf45Q96MC5 204 aaPredicted RBP12.23□□□□□ -0.45
GGPS1-203ENST00000391855 CATSPER2Q96P56 530 aa12.23□□□□□ -0.45
GGPS1-203ENST00000391855 GPR21Q99679 349 aa12.23□□□□□ -0.45
GGPS1-203ENST00000391855 LHX9Q9NQ69 397 aa12.23□□□□□ -0.45
GGPS1-203ENST00000391855 NSMCE4AQ9NXX6 385 aa12.23□□□□□ -0.45
GGPS1-203ENST00000391855 TAS2R13Q9NYV9 303 aa12.23□□□□□ -0.45
GGPS1-203ENST00000391855 SERTAD3Q9UJW9 196 aa12.23□□□□□ -0.45
GGPS1-203ENST00000391855 MED16Q9Y2X0 877 aa12.23□□□□□ -0.45
GGPS1-203ENST00000391855 NFS1Q9Y697 457 aa12.23□□□□□ -0.45
GGPS1-203ENST00000391855 LOC101059948A0A1B0GTJ6 334 aa12.22□□□□□ -0.45
GGPS1-203ENST00000391855 EIF4E1BA6NMX2 242 aaKnown RBP12.22□□□□□ -0.45
GGPS1-203ENST00000391855 C21orf140B9A014 251 aa12.22□□□□□ -0.45
GGPS1-203ENST00000391855 TMEM150CB9EJG8 249 aa12.22□□□□□ -0.45
GGPS1-203ENST00000391855 E7EQ34 232 aa12.22□□□□□ -0.45
GGPS1-203ENST00000391855 MYO1CO00159 1063 aa12.22□□□□□ -0.45
GGPS1-203ENST00000391855 TP73O15350 636 aa12.22□□□□□ -0.45
GGPS1-203ENST00000391855 TIAF1O95411 115 aa12.22□□□□□ -0.45
GGPS1-203ENST00000391855 KLK3P07288 261 aaPredicted RBP12.22□□□□□ -0.45
GGPS1-203ENST00000391855 PVRP15151 417 aa12.22□□□□□ -0.45
GGPS1-203ENST00000391855 CYP2A7P20853 494 aa12.22□□□□□ -0.45
GGPS1-203ENST00000391855 PEBP1P30086 187 aaKnown RBP12.22□□□□□ -0.45
GGPS1-203ENST00000391855 DLSTP36957 453 aa12.22□□□□□ -0.45
GGPS1-203ENST00000391855 ITGA1P56199 1179 aa12.22□□□□□ -0.45
GGPS1-203ENST00000391855 MGAT5Q09328 741 aa12.22□□□□□ -0.45
GGPS1-203ENST00000391855 CYP2A13Q16696 494 aa12.22□□□□□ -0.45
GGPS1-203ENST00000391855 WHAMMP3Q1A5X7 153 aa12.22□□□□□ -0.45
GGPS1-203ENST00000391855 TAF1BQ53T94 588 aaPredicted RBP12.22□□□□□ -0.45
GGPS1-203ENST00000391855 CDHR3Q6ZTQ4 885 aa12.22□□□□□ -0.45
GGPS1-203ENST00000391855 TRIM73Q86UV7 250 aa12.22□□□□□ -0.45
GGPS1-203ENST00000391855 SLC26A11Q86WA9 606 aa12.22□□□□□ -0.45
GGPS1-203ENST00000391855 IGDCC3Q8IVU1 814 aa12.22□□□□□ -0.45
GGPS1-203ENST00000391855 GPR135Q8IZ08 494 aa12.22□□□□□ -0.45
GGPS1-203ENST00000391855 UNC5BQ8IZJ1 945 aa12.22□□□□□ -0.45
GGPS1-203ENST00000391855 LINC01555Q8NAE3 123 aa12.22□□□□□ -0.45
GGPS1-203ENST00000391855 FBXO36Q8NEA4 188 aa12.22□□□□□ -0.45
GGPS1-203ENST00000391855 OR9A1PQ8NGU1 263 aa12.22□□□□□ -0.45
GGPS1-203ENST00000391855 GIMAP7Q8NHV1 300 aa12.22□□□□□ -0.45
GGPS1-203ENST00000391855 SEC14L1Q92503 715 aa12.22□□□□□ -0.45
GGPS1-203ENST00000391855 TTC9Q92623 222 aa12.22□□□□□ -0.45
GGPS1-203ENST00000391855 NRTNQ99748 197 aa12.22□□□□□ -0.45
GGPS1-203ENST00000391855 SLC12A9Q9BXP2 914 aa12.22□□□□□ -0.45
GGPS1-203ENST00000391855 DPH5Q9H2P9 285 aa12.22□□□□□ -0.45
GGPS1-203ENST00000391855 PPANQ9NQ55 473 aaKnown RBP12.22□□□□□ -0.45
GGPS1-203ENST00000391855 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.22□□□□□ -0.45
GGPS1-203ENST00000391855 ZFATQ9P243 1243 aa12.22□□□□□ -0.45
GGPS1-203ENST00000391855 AP1M2Q9Y6Q5 423 aa12.22□□□□□ -0.45
GGPS1-203ENST00000391855 DSPP15924 2871 aaKnown RBP12.21□□□□□ -0.45
GGPS1-203ENST00000391855 ARHGEF33A8MVX0 844 aa12.21□□□□□ -0.45
GGPS1-203ENST00000391855 RECKO95980 971 aa12.21□□□□□ -0.45
GGPS1-203ENST00000391855 ERGP11308 486 aa12.21□□□□□ -0.45
GGPS1-203ENST00000391855 WT1P19544 449 aaPredicted RBP12.21□□□□□ -0.45
GGPS1-203ENST00000391855 SP140Q13342 867 aa12.21□□□□□ -0.45
GGPS1-203ENST00000391855 DNASE1L3Q13609 305 aa12.21□□□□□ -0.45
GGPS1-203ENST00000391855 SOWAHCQ53LP3 525 aaPredicted RBP12.21□□□□□ -0.45
GGPS1-203ENST00000391855 TEDDM1Q5T9Z0 273 aa12.21□□□□□ -0.45
GGPS1-203ENST00000391855 DUPD1Q68J44 220 aa12.21□□□□□ -0.45
GGPS1-203ENST00000391855 FAM45BPQ6NSW5 357 aa12.21□□□□□ -0.45
GGPS1-203ENST00000391855 CPNE9Q8IYJ1 553 aa12.21□□□□□ -0.45
GGPS1-203ENST00000391855 ZBED8Q8IZ13 594 aa12.21□□□□□ -0.45
GGPS1-203ENST00000391855 LMNTD1Q8N9Z9 388 aa12.21□□□□□ -0.45
GGPS1-203ENST00000391855 OR1L3Q8NH93 324 aa12.21□□□□□ -0.45
GGPS1-203ENST00000391855 FAM45AQ8TCE6 357 aa12.21□□□□□ -0.45
GGPS1-203ENST00000391855 SMPDL3AQ92484 453 aa12.21□□□□□ -0.45
GGPS1-203ENST00000391855 STARD8Q92502 1023 aa12.21□□□□□ -0.45
GGPS1-203ENST00000391855 PWWP2AQ96N64 755 aa12.21□□□□□ -0.45
GGPS1-203ENST00000391855 IL17FQ96PD4 163 aa12.21□□□□□ -0.45
GGPS1-203ENST00000391855 DPH2Q9BQC3 489 aaPredicted RBP12.21□□□□□ -0.45
GGPS1-203ENST00000391855 WDR83Q9BRX9 315 aaKnown RBP12.21□□□□□ -0.45
GGPS1-203ENST00000391855 SLC7A5P2Q9GIP4 190 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms