RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 SIAEQ9HAT2 523 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 SPAG4Q9NPE6 437 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 SNX13Q9Y5W8 968 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 ST14Q9Y5Y6 855 aa13.93□□□□□ -0.18
CLCN4-201ENST00000380829 PRORSD1PA6NEY8 169 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 OR2AG2A6NM03 316 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 FADS2P1A8MWK0 482 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 FFAR3O14843 346 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 GPR42O15529 346 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 HOXC11O43248 304 aaPredicted RBP13.92□□□□□ -0.18
CLCN4-201ENST00000380829 CAPNS1P04632 268 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 SRPRAP08240 638 aaKnown RBP13.92□□□□□ -0.18
CLCN4-201ENST00000380829 ZNF182P17025 639 aaPredicted RBP13.92□□□□□ -0.18
CLCN4-201ENST00000380829 RPIAP49247 311 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 RAB15P59190 212 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 ABRAXAS2Q15018 415 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 C6orf136Q5SQH8 315 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 PARS2Q7L3T8 475 aaKnown RBP13.92□□□□□ -0.18
CLCN4-201ENST00000380829 GET4Q7L5D6 327 aaPredicted RBP13.92□□□□□ -0.18
CLCN4-201ENST00000380829 SPATA19Q7Z5L4 167 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 SFRP1Q8N474 314 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 FGF13Q92913 245 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 ASB16Q96NS5 453 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 CXorf21Q9HAI6 301 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 RIC8BQ9NVN3 520 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 AIG1Q9NVV5 245 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 GIN1Q9NXP7 522 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 ARL15Q9NXU5 204 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 MAP10Q9P2G4 905 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 GMPR2Q9P2T1 348 aaKnown RBP13.92□□□□□ -0.18
CLCN4-201ENST00000380829 TSPAN11A1L157 253 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 ACOT8O14734 319 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 ANGPT2O15123 496 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 KDM1AO60341 852 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 SYNCRIPO60506 623 aaKnown RBP13.92□□□□□ -0.18
CLCN4-201ENST00000380829 BCAS2O75934 225 aaPredicted RBP13.92□□□□□ -0.18
CLCN4-201ENST00000380829 MATN4O95460 622 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 POU2F2P09086 479 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 CBSLP0DN79 551 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 CKMT2P17540 419 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 CBSP35520 551 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 SLC7A2P52569 658 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 UFM1P61960 85 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 ERVK-8P63133 956 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 ATP6AP1LQ52LC2 224 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 HABP4Q5JVS0 413 aaKnown RBP13.92□□□□□ -0.18
CLCN4-201ENST00000380829 PDE12Q6L8Q7 609 aaKnown RBP13.92□□□□□ -0.18
CLCN4-201ENST00000380829 ANKRD26P1Q6NSI1 321 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 UBE2R2Q712K3 238 aaPredicted RBP13.92□□□□□ -0.18
CLCN4-201ENST00000380829 ETFBKMTQ8IXQ9 262 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 FAM110BQ8TC76 370 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 VPS33AQ96AX1 596 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 WRAP53Q9BUR4 548 aaKnown RBP13.92□□□□□ -0.18
CLCN4-201ENST00000380829 NPLQ9BXD5 320 aaPredicted RBP13.92□□□□□ -0.18
CLCN4-201ENST00000380829 PDE10AQ9Y233 779 aa13.92□□□□□ -0.18
CLCN4-201ENST00000380829 BBIP1A8MTZ0 92 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 CFAP99D6REC4 459 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 ELFN1P0C7U0 828 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 ERVK-21P61565 698 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 DMPKQ09013 629 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 CAPRIN1Q14444 709 aaKnown RBP13.91□□□□□ -0.18
CLCN4-201ENST00000380829 CLPPQ16740 277 aaPredicted RBP13.91□□□□□ -0.18
CLCN4-201ENST00000380829 LDLRAP1Q5SW96 308 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 HENMT1Q5T8I9 393 aaKnown RBP13.91□□□□□ -0.18
CLCN4-201ENST00000380829 C8orf82Q6P1X6 216 aaPredicted RBP13.91□□□□□ -0.18
CLCN4-201ENST00000380829 GALNT18Q6P9A2 607 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 BLOC1S3Q6QNY0 202 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 BTLAQ7Z6A9 289 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 PCYOX1LQ8NBM8 494 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 WFIKKN2Q8TEU8 576 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 RDH14Q9HBH5 336 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 ZDHHC4Q9NPG8 344 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 SMOXQ9NWM0 555 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 GID8Q9NWU2 228 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 NDUFAF1Q9Y375 327 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 NUP210Q8TEM1 1887 aaPredicted RBP13.91□□□□□ -0.18
CLCN4-201ENST00000380829 C2orf16Q68DN1 1984 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 ANTXRLA6NF34 631 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 HEPACAM2A8MVW5 462 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 SGTAO43765 313 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 ANXA5P08758 320 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 MSH3P20585 1137 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 TCEA1P23193 301 aaKnown RBP13.91□□□□□ -0.18
CLCN4-201ENST00000380829 MMP12P39900 470 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 DCDC1P59894 354 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 YBX1P67809 324 aaKnown RBP13.91□□□□□ -0.18
CLCN4-201ENST00000380829 RAB39AQ14964 217 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 ACOX1Q15067 660 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 NR6A1Q15406 480 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 SHHQ15465 462 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 GAB4Q2WGN9 574 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 FNDC3BQ53EP0 1204 aaKnown RBP13.91□□□□□ -0.18
CLCN4-201ENST00000380829 SMUG1Q53HV7 270 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 DPPA4Q7L190 304 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 ZC3H7AQ8IWR0 971 aaKnown RBP13.91□□□□□ -0.18
CLCN4-201ENST00000380829 HM13Q8TCT9 377 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 ELMO1Q92556 727 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 HPS1Q92902 700 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 SMARCD2Q92925 531 aa13.91□□□□□ -0.18
CLCN4-201ENST00000380829 ASB9Q96DX5 294 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms