RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 STAG3L1P0CL83 205 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 KCNE1P15382 129 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 CA5AP35218 305 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 GJA5P36382 358 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 EIF1P41567 113 aaKnown RBP7.32□□□□□ -1.24
CDKL5-201ENST00000379989 ASPAP45381 313 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 BPIFB3P59826 476 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 CCINQ13939 588 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 ETFDHQ16134 617 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 ARL13AQ5H913 290 aaPredicted RBP7.32□□□□□ -1.24
CDKL5-201ENST00000379989 ZBTB41Q5SVQ8 909 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 SUSD1Q6UWL2 747 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 LCLAT1Q6UWP7 414 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 ZYG11AQ6WRX3 759 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 FAM183BPQ6ZVS7 135 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 SYVN1Q86TM6 617 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 FBXO16Q8IX29 292 aaPredicted RBP7.32□□□□□ -1.24
CDKL5-201ENST00000379989 NANPQ8TBE9 248 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 BRI3BPQ8WY22 251 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 GAL3ST1Q99999 423 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 PELOQ9BRX2 385 aaKnown RBP7.32□□□□□ -1.24
CDKL5-201ENST00000379989 TBCDQ9BTW9 1192 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 TRIM62Q9BVG3 475 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 RNF121Q9H920 327 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 NMUR1Q9HB89 426 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 APOBEC3GQ9HC16 384 aaKnown RBP7.32□□□□□ -1.24
CDKL5-201ENST00000379989 ZDHHC4Q9NPG8 344 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 RDH8Q9NYR8 311 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 CTSFQ9UBX1 484 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 FKBP7Q9Y680 259 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.32□□□□□ -1.24
CDKL5-201ENST00000379989 PQLC2LA1A4F0 135 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 F8VP50 259 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 AIREO43918 545 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 PSIP1O75475 530 aaKnown RBP7.32□□□□□ -1.24
CDKL5-201ENST00000379989 RFPL3O75679 317 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 CYP7B1O75881 506 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 SNAI1O95863 264 aaPredicted RBP7.32□□□□□ -1.24
CDKL5-201ENST00000379989 MT-ND2P03891 347 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 HBQ1P09105 142 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 ACSM4P0C7M7 580 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 RNF224P0DH78 156 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 JUPP14923 745 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 HK1P19367 917 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 RPL34P49207 117 aaKnown RBP7.32□□□□□ -1.24
CDKL5-201ENST00000379989 HOXC5Q00444 222 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 LRRC74AQ0VAA2 488 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 FASTKQ14296 549 aaKnown RBP7.32□□□□□ -1.24
CDKL5-201ENST00000379989 ZNF425Q6IV72 752 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 HACD2Q6Y1H2 254 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 CLEC4FQ8N1N0 589 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 ZNF566Q969W8 418 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 TMEM176AQ96HP8 235 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 RHNO1Q9BSD3 238 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 AP5M1Q9H0R1 490 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 ABCD2Q9UBJ2 740 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 GLS2Q9UI32 602 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 OGDHLQ9ULD0 1010 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 BAIAP2Q9UQB8 552 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 A0A1W2PQ09 198 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 TMEM233B4DJY2 109 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 SDHDO14521 159 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 PRMT5O14744 637 aaPredicted RBP7.31□□□□□ -1.24
CDKL5-201ENST00000379989 GNB5O14775 395 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 PAPSS2O95340 614 aaPredicted RBP7.31□□□□□ -1.24
CDKL5-201ENST00000379989 PLATP00750 562 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 RAF1P04049 648 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 SNRPB2P08579 225 aaKnown RBP7.31□□□□□ -1.24
CDKL5-201ENST00000379989 CFHP08603 1231 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 HPGDP15428 266 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 CLCN7P51798 805 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 CRYBB1P53674 252 aaPredicted RBP7.31□□□□□ -1.24
CDKL5-201ENST00000379989 CDH8P55286 799 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 SP4Q02446 784 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 ADAM15Q13444 863 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 SEMA5AQ13591 1074 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 EXOSC2Q13868 293 aaKnown RBP7.31□□□□□ -1.24
CDKL5-201ENST00000379989 PRPSAP1Q14558 356 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 TRIP4Q15650 581 aaPredicted RBP7.31□□□□□ -1.24
CDKL5-201ENST00000379989 GPR158Q5T848 1215 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 C17orf107Q6ZR85 190 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 BNIPLQ7Z465 357 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 RNF135Q8IUD6 432 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 RAD51AP1Q96B01 352 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 HYLS1Q96M11 299 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 TSGA13Q96PP4 275 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 PPP1R16BQ96T49 567 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 SLC30A2Q9BRI3 323 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 FEM1AQ9BSK4 669 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 RNF167Q9H6Y7 350 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 ACOT13Q9NPJ3 140 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 ZNF275Q9NSD4 429 aaPredicted RBP7.31□□□□□ -1.24
CDKL5-201ENST00000379989 CATSPERZQ9NTU4 200 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 PPP1R14DQ9NXH3 145 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 RCOR3Q9P2K3 495 aaPredicted RBP7.31□□□□□ -1.24
CDKL5-201ENST00000379989 VPS9D1Q9Y2B5 631 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 ANKRD12Q6UB98 2062 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 MROH6A6NGR9 719 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 HNRNPCL2B2RXH8 293 aa7.31□□□□□ -1.24
CDKL5-201ENST00000379989 STX16O14662 325 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms