RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	FAM219B	Q5XKK7	198 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	TMIE	Q8NEW7	156 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	GLYATL1	Q969I3	302 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	TTYH1	Q9H313	450 aa	Predicted RBP	11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	FBXL12	Q9NXK8	326 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	BTRC	Q9Y297	605 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	PRKAB1	Q9Y478	270 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	HELZ	P42694	1942 aa	Known RBP	11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	TBC1D3D	A0A087WVF3	549 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	TBC1D3I	A0A087WXS9	549 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	TBC1D3E	A0A087X179	549 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	TBC1D3K	A0A087X1G2	549 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	TBC1D3F	A6NER0	549 aa	Predicted RBP	11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	TRPC5OS	A6NMA1	111 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499		B2RBV5	119 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	TBC1D3L	B9A6J9	549 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	SLCO1B7	G3V0H7	640 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	STK25	O00506	426 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	TBC1D3H	P0C7X1	549 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	PTGS2	P35354	604 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	P2RY2	P41231	377 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	CLC	Q05315	142 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	TMEM115	Q12893	351 aa	Predicted RBP	11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	SGCG	Q13326	291 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	TCEA2	Q15560	299 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	NDUFA5	Q16718	116 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	C18orf21	Q32NC0	220 aa	Predicted RBP	11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	SGO1	Q5FBB7	561 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	TBC1D3G	Q6DHY5	549 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	TBC1D3C	Q6IPX1	549 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	UBE2R2	Q712K3	238 aa	Predicted RBP	11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	TRMT11	Q7Z4G4	463 aa	Known RBP	11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	TBC1D3	Q8IZP1	549 aa	Predicted RBP	11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	LILRB4	Q8NHJ6	448 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	RHEBL1	Q8TAI7	183 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	PLEKHA8	Q96JA3	519 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	RSPH9	Q9H1X1	276 aa	Predicted RBP	11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	FANCE	Q9HB96	536 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	VTI1B	Q9UEU0	232 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	PPIL1	Q9Y3C6	166 aa		11.42	□□□□□ -0.58
LMO7-204	ENST00000377499	IGLON5	A6NGN9	336 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	FADS2P1	A8MWK0	482 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	TMX2-CTNND1	H3BSU7	103 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	PAK4	O96013	591 aa	Predicted RBP	11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	FTH1	P02794	183 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	PEX2	P28328	305 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	S100A5	P33763	92 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	GDF5	P43026	501 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	SUOX	P51687	545 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	DNAJB13	P59910	316 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	UNC50	Q53HI1	259 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	HABP4	Q5JVS0	413 aa	Known RBP	11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	EYS	Q5T1H1	3165 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	PXDC1	Q5TGL8	231 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	TMEM198	Q66K66	360 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	TRAM1L1	Q8N609	369 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	CDK15	Q96Q40	435 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	KCNA7	Q96RP8	456 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	ATOH8	Q96SQ7	321 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	BTBD10	Q9BSF8	475 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	CCDC28B	Q9BUN5	200 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	TMEM245	Q9H330	911 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	ATPIF1	Q9UII2	106 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	DAPK2	Q9UIK4	370 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	REV3L	O60673	3130 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	C2CD4D	B7Z1M9	353 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	FFAR2	O15552	330 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	CCR7	P32248	378 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	CTH	P32929	405 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	NME5	P56597	212 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	GK3P	Q14409	553 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	KIF19	Q2TAC6	998 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	TUBA3E	Q6PEY2	450 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	MBOAT1	Q6ZNC8	495 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	FRMD7	Q6ZUT3	714 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	TMPRSS6	Q8IU80	811 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	LSMEM2	Q8N112	164 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	CDYL2	Q8N8U2	506 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	SMRP1	Q8NCR6	262 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	BTN2A2	Q8WVV5	523 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	TUBB6	Q9BUF5	446 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	DOCK8	Q8NF50	2099 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	PCM1	Q15154	2024 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499		K7ESM1	405 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	TSPAN6	O43657	245 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	TM7SF2	O76062	418 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	MYO1D	O94832	1006 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	JUN	P05412	331 aa	Known RBP	11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	UQCRB	P14927	111 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	RPS3	P23396	243 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	PREP	P48147	710 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	RPIA	P49247	311 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	ACADVL	P49748	655 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	FOLH1	Q04609	750 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	LDLRAP1	Q5SW96	308 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	MACC1	Q6ZN28	852 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	CFAP206	Q8IYR0	622 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	SNX31	Q8N9S9	440 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	ICA1L	Q8NDH6	482 aa		11.41	□□□□□ -0.58
LMO7-204	ENST00000377499	ASZ1	Q8WWH4	475 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms