RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 ANKRD46Q86W74 232 aa24.68■■□□□ 1.54
C9orf40-201ENST00000376854 ARL10Q8N8L6 244 aa24.68■■□□□ 1.54
C9orf40-201ENST00000376854 ZNF461Q8TAF7 563 aa24.68■■□□□ 1.54
C9orf40-201ENST00000376854 PXYLP1Q8TE99 480 aa24.68■■□□□ 1.54
C9orf40-201ENST00000376854 SLC22A12Q96S37 553 aa24.68■■□□□ 1.54
C9orf40-201ENST00000376854 C2orf49Q9BVC5 232 aaPredicted RBP24.68■■□□□ 1.54
C9orf40-201ENST00000376854 RMND5AQ9H871 391 aa24.68■■□□□ 1.54
C9orf40-201ENST00000376854 ARL15Q9NXU5 204 aa24.68■■□□□ 1.54
C9orf40-201ENST00000376854 MAN2B2Q9Y2E5 1009 aa24.68■■□□□ 1.54
C9orf40-201ENST00000376854 SNX5Q9Y5X3 404 aa24.68■■□□□ 1.54
C9orf40-201ENST00000376854 MYCLP1P12525 358 aaPredicted RBP24.68■■□□□ 1.54
C9orf40-201ENST00000376854 PFKLP17858 780 aa24.68■■□□□ 1.54
C9orf40-201ENST00000376854 RPIAP49247 311 aa24.68■■□□□ 1.54
C9orf40-201ENST00000376854 ZNF691Q5VV52 312 aa24.68■■□□□ 1.54
C9orf40-201ENST00000376854 OR10Q1Q8NGQ4 319 aa24.68■■□□□ 1.54
C9orf40-201ENST00000376854 SELENOMQ8WWX9 145 aa24.68■■□□□ 1.54
C9orf40-201ENST00000376854 TRMT2BQ96GJ1 504 aaKnown RBP24.68■■□□□ 1.54
C9orf40-201ENST00000376854 PYURFQ96I23 114 aa24.68■■□□□ 1.54
C9orf40-201ENST00000376854 ITCHQ96J02 903 aa24.68■■□□□ 1.54
C9orf40-201ENST00000376854 TNKS2Q9H2K2 1166 aa24.68■■□□□ 1.54
C9orf40-201ENST00000376854 SLC32A1Q9H598 525 aa24.68■■□□□ 1.54
C9orf40-201ENST00000376854 KCTD5Q9NXV2 234 aa24.68■■□□□ 1.54
C9orf40-201ENST00000376854 ORC6Q9Y5N6 252 aa24.68■■□□□ 1.54
C9orf40-201ENST00000376854 SLC1A7O00341 560 aa24.67■■□□□ 1.54
C9orf40-201ENST00000376854 PER2O15055 1255 aa24.67■■□□□ 1.54
C9orf40-201ENST00000376854 CLPXO76031 633 aa24.67■■□□□ 1.54
C9orf40-201ENST00000376854 ARHGEF15O94989 841 aa24.67■■□□□ 1.54
C9orf40-201ENST00000376854 LATS1O95835 1130 aa24.67■■□□□ 1.54
C9orf40-201ENST00000376854 MYCP01106 439 aaPredicted RBP24.67■■□□□ 1.54
C9orf40-201ENST00000376854 ZNF12P17014 697 aa24.67■■□□□ 1.54
C9orf40-201ENST00000376854 IL1RNP18510 177 aa24.67■■□□□ 1.54
C9orf40-201ENST00000376854 DPY19L1Q2PZI1 675 aa24.67■■□□□ 1.54
C9orf40-201ENST00000376854 CES5AQ6NT32 575 aa24.67■■□□□ 1.54
C9orf40-201ENST00000376854 GALNT18Q6P9A2 607 aa24.67■■□□□ 1.54
C9orf40-201ENST00000376854 TPGS1Q6ZTW0 290 aa24.67■■□□□ 1.54
C9orf40-201ENST00000376854 TSPAN33Q86UF1 283 aa24.67■■□□□ 1.54
C9orf40-201ENST00000376854 HIPK1Q86Z02 1210 aa24.67■■□□□ 1.54
C9orf40-201ENST00000376854 DCP2Q8IU60 420 aaKnown RBP24.67■■□□□ 1.54
C9orf40-201ENST00000376854 MUL1Q969V5 352 aa24.67■■□□□ 1.54
C9orf40-201ENST00000376854 HHIPL1Q96JK4 782 aa24.67■■□□□ 1.54
C9orf40-201ENST00000376854 TSSK3Q96PN8 268 aa24.67■■□□□ 1.54
C9orf40-201ENST00000376854 FUNDC2Q9BWH2 189 aa24.67■■□□□ 1.54
C9orf40-201ENST00000376854 RAD21L1Q9H4I0 556 aa24.67■■□□□ 1.54
C9orf40-201ENST00000376854 EXD2Q9NVH0 621 aa24.67■■□□□ 1.54
C9orf40-201ENST00000376854 TMEFF2Q9UIK5 374 aaPredicted RBP24.67■■□□□ 1.54
C9orf40-201ENST00000376854 BAG5Q9UL15 447 aa24.67■■□□□ 1.54
C9orf40-201ENST00000376854 PTGES3LE9PB15 166 aa24.67■■□□□ 1.54
C9orf40-201ENST00000376854 PQBP1O60828 265 aaKnown RBP24.67■■□□□ 1.54
C9orf40-201ENST00000376854 CBFA2T3O75081 653 aa24.67■■□□□ 1.54
C9orf40-201ENST00000376854 EFEMP2O95967 443 aa24.67■■□□□ 1.54
C9orf40-201ENST00000376854 RAD23AP54725 363 aa24.67■■□□□ 1.54
C9orf40-201ENST00000376854 SPIDRQ14159 915 aa24.67■■□□□ 1.54
C9orf40-201ENST00000376854 SLC15A4Q8N697 577 aa24.67■■□□□ 1.54
C9orf40-201ENST00000376854 COX4I2Q96KJ9 171 aa24.67■■□□□ 1.54
C9orf40-201ENST00000376854 J3QRK9 145 aa24.66■■□□□ 1.54
C9orf40-201ENST00000376854 B3GALT4O96024 378 aa24.66■■□□□ 1.54
C9orf40-201ENST00000376854 NEK2P51955 445 aa24.66■■□□□ 1.54
C9orf40-201ENST00000376854 SEMG2Q02383 582 aa24.66■■□□□ 1.54
C9orf40-201ENST00000376854 VEPH1Q14D04 833 aa24.66■■□□□ 1.54
C9orf40-201ENST00000376854 PGS1Q32NB8 556 aa24.66■■□□□ 1.54
C9orf40-201ENST00000376854 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.66■■□□□ 1.54
C9orf40-201ENST00000376854 HOMEZQ8IX15 550 aa24.66■■□□□ 1.54
C9orf40-201ENST00000376854 NAT16Q8N8M0 369 aa24.66■■□□□ 1.54
C9orf40-201ENST00000376854 GPR26Q8NDV2 337 aa24.66■■□□□ 1.54
C9orf40-201ENST00000376854 FKBP10Q96AY3 582 aa24.66■■□□□ 1.54
C9orf40-201ENST00000376854 FBXL8Q96CD0 374 aa24.66■■□□□ 1.54
C9orf40-201ENST00000376854 REXO5Q96IC2 774 aaKnown RBP24.66■■□□□ 1.54
C9orf40-201ENST00000376854 NODALQ96S42 347 aa24.66■■□□□ 1.54
C9orf40-201ENST00000376854 SOCS5O75159 536 aa24.66■■□□□ 1.54
C9orf40-201ENST00000376854 ABLIM3O94929 683 aa24.66■■□□□ 1.54
C9orf40-201ENST00000376854 CBSLP0DN79 551 aa24.66■■□□□ 1.54
C9orf40-201ENST00000376854 PRPS2P11908 318 aa24.66■■□□□ 1.54
C9orf40-201ENST00000376854 CBSP35520 551 aa24.66■■□□□ 1.54
C9orf40-201ENST00000376854 CDKN2CP42773 168 aa24.66■■□□□ 1.54
C9orf40-201ENST00000376854 NSG1P42857 185 aa24.66■■□□□ 1.54
C9orf40-201ENST00000376854 RAB15P59190 212 aa24.66■■□□□ 1.54
C9orf40-201ENST00000376854 RFX4Q33E94 735 aa24.66■■□□□ 1.54
C9orf40-201ENST00000376854 CRTC3Q6UUV7 619 aa24.66■■□□□ 1.54
C9orf40-201ENST00000376854 ZSWIM9Q86XI8 627 aa24.66■■□□□ 1.54
C9orf40-201ENST00000376854 CBARPQ8N350 705 aaPredicted RBP24.66■■□□□ 1.54
C9orf40-201ENST00000376854 ADAMTS19Q8TE59 1207 aa24.66■■□□□ 1.54
C9orf40-201ENST00000376854 POP5Q969H6 163 aaKnown RBP24.66■■□□□ 1.54
C9orf40-201ENST00000376854 ABCG8Q9H221 673 aa24.66■■□□□ 1.54
C9orf40-201ENST00000376854 ELOVL6Q9H5J4 265 aa24.66■■□□□ 1.54
C9orf40-201ENST00000376854 ATP13A3Q9H7F0 1226 aa24.66■■□□□ 1.54
C9orf40-201ENST00000376854 WNT9AO14904 365 aa24.65■■□□□ 1.54
C9orf40-201ENST00000376854 SLC16A6O15403 523 aa24.65■■□□□ 1.54
C9orf40-201ENST00000376854 GREM1O60565 184 aa24.65■■□□□ 1.54
C9orf40-201ENST00000376854 HOXB6P17509 224 aaKnown RBP24.65■■□□□ 1.54
C9orf40-201ENST00000376854 MAPK8P45983 427 aa24.65■■□□□ 1.54
C9orf40-201ENST00000376854 ZXDBP98169 803 aa24.65■■□□□ 1.54
C9orf40-201ENST00000376854 SLC44A4Q53GD3 710 aa24.65■■□□□ 1.54
C9orf40-201ENST00000376854 DEFB128Q7Z7B8 93 aa24.65■■□□□ 1.54
C9orf40-201ENST00000376854 CHPFQ8IZ52 775 aa24.65■■□□□ 1.54
C9orf40-201ENST00000376854 TRUB1Q8WWH5 349 aaKnown RBP24.65■■□□□ 1.54
C9orf40-201ENST00000376854 PALMDQ9NP74 551 aa24.65■■□□□ 1.54
C9orf40-201ENST00000376854 CREBZFQ9NS37 354 aa24.65■■□□□ 1.54
C9orf40-201ENST00000376854 PAK1IP1Q9NWT1 392 aaPredicted RBP24.65■■□□□ 1.54
C9orf40-201ENST00000376854 CHCHD3Q9NX63 227 aaKnown RBP24.65■■□□□ 1.54
C9orf40-201ENST00000376854 PPT2Q9UMR5 302 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms