RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 SMPD1P17405 629 aa13.45□□□□□ -0.26
COL4A1-201ENST00000375820 MLLT3P42568 568 aaPredicted RBP13.45□□□□□ -0.26
COL4A1-201ENST00000375820 BDKRB1P46663 353 aa13.45□□□□□ -0.26
COL4A1-201ENST00000375820 CAPZA1P52907 286 aa13.45□□□□□ -0.26
COL4A1-201ENST00000375820 TNFAIP8L3Q5GJ75 292 aa13.45□□□□□ -0.26
COL4A1-201ENST00000375820 ADGRD1Q6QNK2 874 aa13.45□□□□□ -0.26
COL4A1-201ENST00000375820 RPS27LQ71UM5 84 aaKnown RBP13.45□□□□□ -0.26
COL4A1-201ENST00000375820 P4HA3Q7Z4N8 544 aa13.45□□□□□ -0.26
COL4A1-201ENST00000375820 ERVW-1Q9UQF0 538 aa13.45□□□□□ -0.26
COL4A1-201ENST00000375820 A0A1B0GVM2 712 aa13.45□□□□□ -0.26
COL4A1-201ENST00000375820 PITPNM1O00562 1244 aa13.45□□□□□ -0.26
COL4A1-201ENST00000375820 RENP00797 406 aa13.45□□□□□ -0.26
COL4A1-201ENST00000375820 MLLT10P55197 1068 aa13.45□□□□□ -0.26
COL4A1-201ENST00000375820 RPS14P62263 151 aaKnown RBP13.45□□□□□ -0.26
COL4A1-201ENST00000375820 RPL6Q02878 288 aaKnown RBP13.45□□□□□ -0.26
COL4A1-201ENST00000375820 HEPACAMQ14CZ8 416 aa13.45□□□□□ -0.26
COL4A1-201ENST00000375820 PCBP1Q15365 356 aaKnown RBP eCLIP13.45□□□□□ -0.26
COL4A1-201ENST00000375820 ZNF311Q5JNZ3 666 aa13.45□□□□□ -0.26
COL4A1-201ENST00000375820 CHRDL2Q6WN34 429 aa13.45□□□□□ -0.26
COL4A1-201ENST00000375820 CEP97Q8IW35 865 aa13.45□□□□□ -0.26
COL4A1-201ENST00000375820 FAM163AQ96GL9 167 aaPredicted RBP13.45□□□□□ -0.26
COL4A1-201ENST00000375820 CENPNQ96H22 339 aaPredicted RBP13.45□□□□□ -0.26
COL4A1-201ENST00000375820 SLC25A51Q9H1U9 297 aa13.45□□□□□ -0.26
COL4A1-201ENST00000375820 GKN1Q9NS71 199 aa13.45□□□□□ -0.26
COL4A1-201ENST00000375820 DERAQ9Y315 318 aa13.45□□□□□ -0.26
COL4A1-201ENST00000375820 MAU2Q9Y6X3 613 aa13.45□□□□□ -0.26
COL4A1-201ENST00000375820 SLIT1O75093 1534 aa13.45□□□□□ -0.26
COL4A1-201ENST00000375820 EFCAB9A8MZ26 197 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 TEX46H3BTG2 121 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 ADAMDEC1O15204 470 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 SIX3O95343 332 aaPredicted RBP13.44□□□□□ -0.26
COL4A1-201ENST00000375820 KLK1P06870 262 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 CHADLQ6NUI6 762 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 TMEM145Q8NBT3 493 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 FBXO22Q8NEZ5 403 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 NSMCE3Q96MG7 304 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 PKP4Q99569 1192 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 CCDC28BQ9BUN5 200 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 DUSP26Q9BV47 211 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 FKBP14Q9NWM8 211 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 HMGXB4Q9UGU5 601 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 YJEFN3A6XGL0 299 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 CDC7O00311 574 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 KERAO60938 352 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 DIRAS1O95057 198 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 FGF19O95750 216 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 BPNT1O95861 308 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 C8AP07357 584 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 AP3S2P59780 193 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 CD47Q08722 323 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 DLK2Q6UY11 383 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 NUS1Q96E22 293 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 CRELD1Q96HD1 420 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 GATA5Q9BWX5 397 aaPredicted RBP13.44□□□□□ -0.26
COL4A1-201ENST00000375820 POLR2J2Q9GZM3 115 aaKnown RBP13.44□□□□□ -0.26
COL4A1-201ENST00000375820 DISP2A7MBM2 1401 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 NOL4O94818 638 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 RPLP0P05388 317 aaKnown RBP13.44□□□□□ -0.26
COL4A1-201ENST00000375820 PTPN2P17706 415 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 LHCGRP22888 699 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 RTP1P59025 263 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 FKBP1AP62942 108 aaKnown RBP13.44□□□□□ -0.26
COL4A1-201ENST00000375820 OLIG2Q13516 323 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 SMYD5Q6GMV2 418 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 FBXL3Q9UKT7 428 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 STXBP5LQ9Y2K9 1186 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 MYOCOSA0A1B0GUC4 107 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 TMEM233B4DJY2 109 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 NARSO43776 548 aaKnown RBP13.44□□□□□ -0.26
COL4A1-201ENST00000375820 ACTR1BP42025 376 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 DHPSP49366 369 aaPredicted RBP13.44□□□□□ -0.26
COL4A1-201ENST00000375820 CLCN4P51793 760 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 NUDT6P53370 316 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 ACTR1AP61163 376 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 RPS24P62847 133 aaKnown RBP13.44□□□□□ -0.26
COL4A1-201ENST00000375820 XIAPP98170 497 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 SYT16Q17RD7 645 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 PPP2R2DQ66LE6 453 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 GALNT15Q8N3T1 639 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 ZNF676Q8N7Q3 588 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 C1orf216Q8TAB5 229 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 UNC93B1Q9H1C4 597 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 C1orf109Q9NX04 203 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 FARSAQ9Y285 508 aaKnown RBP13.44□□□□□ -0.26
COL4A1-201ENST00000375820 ITM2AO43736 263 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 DNAJA2O60884 412 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 UQCRC1P31930 480 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 CD83Q01151 205 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 BEND4Q6ZU67 534 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 PIM3Q86V86 326 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 CMTR2Q8IYT2 770 aaKnown RBP13.44□□□□□ -0.26
COL4A1-201ENST00000375820 RASGEF1CQ8N431 466 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 SRFBP1Q8NEF9 429 aaKnown RBP13.44□□□□□ -0.26
COL4A1-201ENST00000375820 MAN2B2Q9Y2E5 1009 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 CLCA3PQ9Y6N3 262 aa13.44□□□□□ -0.26
COL4A1-201ENST00000375820 EIF2S3LQ2VIR3 472 aaKnown RBP13.43□□□□□ -0.26
COL4A1-201ENST00000375820 ANKRD26P1Q6NSI1 321 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 SLC13A3Q8WWT9 602 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 KLRG1Q96E93 195 aa13.43□□□□□ -0.26
COL4A1-201ENST00000375820 SLC35A5Q9BS91 424 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms