RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 KATNA1O75449 491 aa12.64□□□□□ -0.39
MSH5-204ENST00000375755 S1PR4O95977 384 aa12.64□□□□□ -0.39
MSH5-204ENST00000375755 CSF2RAP15509 400 aa12.64□□□□□ -0.39
MSH5-204ENST00000375755 GGT5P36269 586 aa12.64□□□□□ -0.39
MSH5-204ENST00000375755 MRPL19P49406 292 aaKnown RBP12.64□□□□□ -0.39
MSH5-204ENST00000375755 SGSHP51688 502 aa12.64□□□□□ -0.39
MSH5-204ENST00000375755 GRIK2Q13002 908 aa12.64□□□□□ -0.39
MSH5-204ENST00000375755 SMN1Q16637 294 aaKnown RBP12.64□□□□□ -0.39
MSH5-204ENST00000375755 GALNT5Q7Z7M9 940 aa12.64□□□□□ -0.39
MSH5-204ENST00000375755 PSD4Q8NDX1 1056 aa12.64□□□□□ -0.39
MSH5-204ENST00000375755 RPRD1AQ96P16 312 aaPredicted RBP12.64□□□□□ -0.39
MSH5-204ENST00000375755 ACOX2Q99424 681 aa12.64□□□□□ -0.39
MSH5-204ENST00000375755 PRKD2Q9BZL6 878 aa12.64□□□□□ -0.39
MSH5-204ENST00000375755 MMP27Q9H306 513 aa12.64□□□□□ -0.39
MSH5-204ENST00000375755 ANKHQ9HCJ1 492 aa12.64□□□□□ -0.39
MSH5-204ENST00000375755 NT5MQ9NPB1 228 aa12.64□□□□□ -0.39
MSH5-204ENST00000375755 ACOT13Q9NPJ3 140 aa12.64□□□□□ -0.39
MSH5-204ENST00000375755 A0A0D9SEW6 157 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 H0Y626 953 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 FGF10O15520 208 aaPredicted RBP12.63□□□□□ -0.39
MSH5-204ENST00000375755 ALX3O95076 343 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 TRIM16O95361 564 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 EFEMP2O95967 443 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 LCKP06239 509 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 ALOX12P18054 663 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 ARSDP51689 593 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 TIAL1Q01085 375 aaKnown RBP eCLIP12.63□□□□□ -0.392e-9■■■■□ 19.7
MSH5-204ENST00000375755 ITKQ08881 620 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 LCP2Q13094 533 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 LRRC26Q2I0M4 334 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 TUBA3EQ6PEY2 450 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 ZFAND4Q86XD8 727 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 GATAD2AQ86YP4 633 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 TMEM175Q9BSA9 504 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 MRPL9Q9BYD2 267 aaKnown RBP12.63□□□□□ -0.39
MSH5-204ENST00000375755 ZYG11BQ9C0D3 744 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 DDX28Q9NUL7 540 aaKnown RBP12.63□□□□□ -0.39
MSH5-204ENST00000375755 FBXL12Q9NXK8 326 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 QPCTLQ9NXS2 382 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 TBX21Q9UL17 535 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 RABL2BQ9UNT1 228 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 NEUROG3Q9Y4Z2 214 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 IRF1P10914 325 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 CYP4B1P13584 511 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 JUNDP17535 347 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 SLC26A3P40879 764 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 TRAF3Q13114 568 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 SIM2Q14190 667 aaPredicted RBP12.63□□□□□ -0.39
MSH5-204ENST00000375755 GBX1Q14549 363 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 AAK1Q2M2I8 961 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 KIAA1841Q6NSI8 718 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 PARP16Q8N5Y8 322 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 DPP10Q8N608 796 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 BEND7Q8N7W2 519 aaPredicted RBP12.63□□□□□ -0.39
MSH5-204ENST00000375755 OR6P1Q8NGX9 317 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 RHBDF1Q96CC6 855 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 C1orf74Q96LT6 269 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 SNX18Q96RF0 628 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 ADPRHL2Q9NX46 363 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 ADGRE2Q9UHX3 823 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 TPRKBQ9Y3C4 175 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 MYO7AQ13402 2215 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 C2orf78A6NCI8 922 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 NPPAP01160 153 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 DGKQP52824 942 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 DSC2Q02487 901 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 IL18R1Q13478 541 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 XKR7Q5GH72 579 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 PNCKQ6P2M8 343 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 ZNF549Q6P9A3 640 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 PGBD5Q8N414 524 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 OR5K1Q8NHB7 308 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 PAWRQ96IZ0 340 aaKnown RBP12.63□□□□□ -0.39
MSH5-204ENST00000375755 ATOH8Q96SQ7 321 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 ZIM2Q9NZV7 527 aa12.63□□□□□ -0.39
MSH5-204ENST00000375755 HAT1O14929 419 aa12.62□□□□□ -0.39
MSH5-204ENST00000375755 MRPS15P82914 257 aaKnown RBP12.62□□□□□ -0.39
MSH5-204ENST00000375755 FADDQ13158 208 aa12.62□□□□□ -0.39
MSH5-204ENST00000375755 SYT16Q17RD7 645 aa12.62□□□□□ -0.39
MSH5-204ENST00000375755 SNAP47Q5SQN1 464 aa12.62□□□□□ -0.39
MSH5-204ENST00000375755 TPRG1LQ5T0D9 272 aa12.62□□□□□ -0.39
MSH5-204ENST00000375755 SIGIRRQ6IA17 410 aa12.62□□□□□ -0.39
MSH5-204ENST00000375755 SLC8B1Q6J4K2 584 aa12.62□□□□□ -0.39
MSH5-204ENST00000375755 SYVN1Q86TM6 617 aa12.62□□□□□ -0.39
MSH5-204ENST00000375755 EID3Q8N140 333 aa12.62□□□□□ -0.39
MSH5-204ENST00000375755 TRIM43Q96BQ3 446 aaPredicted RBP12.62□□□□□ -0.39
MSH5-204ENST00000375755 CCDC177Q9NQR7 707 aaPredicted RBP12.62□□□□□ -0.39
MSH5-204ENST00000375755 ZNF225Q9UK10 706 aa12.62□□□□□ -0.39
MSH5-204ENST00000375755 AGO1Q9UL18 857 aaKnown RBP12.62□□□□□ -0.39
MSH5-204ENST00000375755 MN1Q10571 1320 aaPredicted RBP12.62□□□□□ -0.39
MSH5-204ENST00000375755 A8MV72 311 aaPredicted RBP12.62□□□□□ -0.39
MSH5-204ENST00000375755 H7C4K7 107 aa12.62□□□□□ -0.39
MSH5-204ENST00000375755 AP3D1O14617 1153 aa12.62□□□□□ -0.39
MSH5-204ENST00000375755 MUSKO15146 869 aa12.62□□□□□ -0.39
MSH5-204ENST00000375755 GSTA4O15217 222 aa12.62□□□□□ -0.39
MSH5-204ENST00000375755 HOXA2O43364 376 aa12.62□□□□□ -0.39
MSH5-204ENST00000375755 DFNA5O60443 496 aa12.62□□□□□ -0.39
MSH5-204ENST00000375755 PARNO95453 639 aaKnown RBP12.62□□□□□ -0.39
MSH5-204ENST00000375755 IGLV3-27P01718 113 aa12.62□□□□□ -0.39
MSH5-204ENST00000375755 KLKB1P03952 638 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms