RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 PRSS21Q9Y6M0 314 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 R4GN57 208 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 HNRNPRO43390 633 aaKnown RBP15.17■□□□□ 0.02
CCDC40-202ENST00000374876 PABPC4LP0CB38 370 aaKnown RBP15.17■□□□□ 0.02
CCDC40-202ENST00000374876 IL10P22301 178 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 HMOX2P30519 316 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 HOXA6P31267 233 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 SPAM1P38567 509 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 ZFP36L2P47974 494 aaKnown RBP15.17■□□□□ 0.02
CCDC40-202ENST00000374876 YBX1P67809 324 aaKnown RBP15.17■□□□□ 0.02
CCDC40-202ENST00000374876 GK3PQ14409 553 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 CHRNA6Q15825 494 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 CDKN3Q16667 212 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 ZNF528Q3MIS6 628 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 PAGE3Q5JUK9 113 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 C22orf39Q6P5X5 142 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 SLC30A9Q6PML9 568 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 ERMP1Q7Z2K6 904 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 MMAAQ8IVH4 418 aaKnown RBP15.17■□□□□ 0.02
CCDC40-202ENST00000374876 SFRP1Q8N474 314 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 ZBTB2Q8N680 514 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 GOLM1Q8NBJ4 401 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 LKAAEAR1Q8TD35 194 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 EGFL8Q99944 293 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 KCTD14Q9BQ13 255 aaPredicted RBP15.17■□□□□ 0.02
CCDC40-202ENST00000374876 OSBPL11Q9BXB4 747 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 TRIM8Q9BZR9 551 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 PAPOLBQ9NRJ5 636 aaKnown RBP15.17■□□□□ 0.02
CCDC40-202ENST00000374876 ANGPTL3Q9Y5C1 460 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 TRBV5-4A0A0C4DH59 114 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 C7orf72A4D263 438 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 ARPC2O15144 300 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 PGM3O95394 542 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 CLPTM1O96005 669 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 SMIM18P0DKX4 95 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 BMP2P12643 396 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 HSPA7P48741 367 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 HTR6P50406 440 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 PRKG2Q13237 762 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 NR6A1Q15406 480 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 GPR33Q49SQ1 333 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 RABL3Q5HYI8 236 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 ISLR2Q6UXK2 745 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 ZBTB49Q6ZSB9 765 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 MILR1Q7Z6M3 343 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 IFNEQ86WN2 208 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 ANKFN1Q8N957 763 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 CHST14Q8NCH0 376 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 OR2AP1Q8NGE2 309 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 OR2A12Q8NGT7 310 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 PROKR1Q8TCW9 393 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 NELL1Q92832 810 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 ATOH1Q92858 354 aaPredicted RBP15.16■□□□□ 0.02
CCDC40-202ENST00000374876 SIPA1Q96FS4 1042 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 HBEGFQ99075 208 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 MUC13Q9H3R2 512 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 ZNF696Q9H7X3 374 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 ZSCAN32Q9NX65 697 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 PTBP2Q9UKA9 531 aaKnown RBP15.16■□□□□ 0.02
CCDC40-202ENST00000374876 CACNA1HO95180 2353 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 VPS13AQ96RL7 3174 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 HRO43593 1189 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 GSK3BP49841 420 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 RPS14P62263 151 aaKnown RBP15.16■□□□□ 0.02
CCDC40-202ENST00000374876 MYBPC1Q00872 1141 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 EMX2Q04743 252 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 LIPEQ05469 1076 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 CNPY1Q3B7I2 92 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 IYDQ6PHW0 289 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 MACC1Q6ZN28 852 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 DPY19L3Q6ZPD9 716 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 SATL1Q86VE3 508 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 ZFAND4Q86XD8 727 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 FAM160A2Q8N612 972 aaPredicted RBP15.16■□□□□ 0.02
CCDC40-202ENST00000374876 ZBTB44Q8NCP5 570 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 RSPH9Q9H1X1 276 aaPredicted RBP15.16■□□□□ 0.02
CCDC40-202ENST00000374876 WWOXQ9NZC7 414 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 ST14Q9Y5Y6 855 aa15.16■□□□□ 0.02
CCDC40-202ENST00000374876 MUC6Q6W4X9 2439 aa15.15■□□□□ 0.02
CCDC40-202ENST00000374876 ANKRD12Q6UB98 2062 aa15.15■□□□□ 0.02
CCDC40-202ENST00000374876 EML5Q05BV3 1969 aa15.15■□□□□ 0.02
CCDC40-202ENST00000374876 SMIM31A0A1B0GVY4 71 aa15.15■□□□□ 0.02
CCDC40-202ENST00000374876 DYTNA2CJ06 578 aa15.15■□□□□ 0.02
CCDC40-202ENST00000374876 EME2A4GXA9 379 aaPredicted RBP15.15■□□□□ 0.02
CCDC40-202ENST00000374876 TAPBPO15533 448 aa15.15■□□□□ 0.02
CCDC40-202ENST00000374876 NPPAP01160 153 aa15.15■□□□□ 0.02
CCDC40-202ENST00000374876 IL12AP29459 219 aa15.15■□□□□ 0.02
CCDC40-202ENST00000374876 SNRPD1P62314 119 aaKnown RBP15.15■□□□□ 0.02
CCDC40-202ENST00000374876 TRAF3Q13114 568 aa15.15■□□□□ 0.02
CCDC40-202ENST00000374876 TTLL9Q3SXZ7 439 aa15.15■□□□□ 0.02
CCDC40-202ENST00000374876 POM121L1PQ3SYA9 428 aa15.15■□□□□ 0.02
CCDC40-202ENST00000374876 CARD16Q5EG05 197 aa15.15■□□□□ 0.02
CCDC40-202ENST00000374876 GPRC6AQ5T6X5 926 aa15.15■□□□□ 0.02
CCDC40-202ENST00000374876 TSPAN33Q86UF1 283 aa15.15■□□□□ 0.02
CCDC40-202ENST00000374876 WDR5BQ86VZ2 330 aa15.15■□□□□ 0.02
CCDC40-202ENST00000374876 ZSWIM9Q86XI8 627 aa15.15■□□□□ 0.02
CCDC40-202ENST00000374876 NXPE1Q8N323 547 aa15.15■□□□□ 0.02
CCDC40-202ENST00000374876 CBARPQ8N350 705 aaPredicted RBP15.15■□□□□ 0.02
CCDC40-202ENST00000374876 CHCHD4Q8N4Q1 142 aa15.15■□□□□ 0.02
CCDC40-202ENST00000374876 SLC29A1Q99808 456 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms