RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 C10orf107Q8IVU9 208 aa17.03■□□□□ 0.32
PFDN6-201ENST00000374606 SDR16C5Q8N3Y7 309 aa17.03■□□□□ 0.32
PFDN6-201ENST00000374606 PTGR2Q8N8N7 351 aaPredicted RBP17.03■□□□□ 0.32
PFDN6-201ENST00000374606 PDPRQ8NCN5 879 aa17.03■□□□□ 0.32
PFDN6-201ENST00000374606 FBXO15Q8NCQ5 510 aaPredicted RBP17.03■□□□□ 0.32
PFDN6-201ENST00000374606 OR5AR1Q8NGP9 310 aa17.03■□□□□ 0.32
PFDN6-201ENST00000374606 OR5K2Q8NHB8 316 aa17.03■□□□□ 0.32
PFDN6-201ENST00000374606 SETD7Q8WTS6 366 aaKnown RBP17.03■□□□□ 0.32
PFDN6-201ENST00000374606 OXSMQ9NWU1 459 aa17.03■□□□□ 0.32
PFDN6-201ENST00000374606 TDRD6O60522 2096 aaKnown RBP17.03■□□□□ 0.32
PFDN6-201ENST00000374606 ASXL3Q9C0F0 2248 aa17.02■□□□□ 0.32
PFDN6-201ENST00000374606 HELZ2Q9BYK8 2649 aaKnown RBP17.02■□□□□ 0.32
PFDN6-201ENST00000374606 OR52A4PA6NMU1 304 aa17.02■□□□□ 0.32
PFDN6-201ENST00000374606 KLK8O60259 260 aa17.02■□□□□ 0.32
PFDN6-201ENST00000374606 IPO13O94829 963 aaKnown RBP17.02■□□□□ 0.32
PFDN6-201ENST00000374606 CER1O95813 267 aa17.02■□□□□ 0.32
PFDN6-201ENST00000374606 ANXA6P08133 673 aa17.02■□□□□ 0.32
PFDN6-201ENST00000374606 ZNF883P0CG24 379 aa17.02■□□□□ 0.32
PFDN6-201ENST00000374606 MDH1P40925 334 aaKnown RBP17.02■□□□□ 0.32
PFDN6-201ENST00000374606 RXRGP48443 463 aa17.02■□□□□ 0.32
PFDN6-201ENST00000374606 GYS2P54840 703 aa17.02■□□□□ 0.32
PFDN6-201ENST00000374606 ALDH18A1P54886 795 aaKnown RBP17.02■□□□□ 0.32
PFDN6-201ENST00000374606 GUCY1A3Q02108 690 aa17.02■□□□□ 0.32
PFDN6-201ENST00000374606 KRT33BQ14525 404 aa17.02■□□□□ 0.32
PFDN6-201ENST00000374606 RPE65Q16518 533 aa17.02■□□□□ 0.32
PFDN6-201ENST00000374606 PFKFB4Q16877 469 aa17.02■□□□□ 0.32
PFDN6-201ENST00000374606 CDKL4Q5MAI5 379 aa17.02■□□□□ 0.32
PFDN6-201ENST00000374606 LIPMQ5VYY2 423 aa17.02■□□□□ 0.32
PFDN6-201ENST00000374606 IL27RAQ6UWB1 636 aa17.02■□□□□ 0.32
PFDN6-201ENST00000374606 MBOAT1Q6ZNC8 495 aa17.02■□□□□ 0.32
PFDN6-201ENST00000374606 TMPRSS7Q7RTY8 843 aa17.02■□□□□ 0.32
PFDN6-201ENST00000374606 TRIM42Q8IWZ5 723 aa17.02■□□□□ 0.32
PFDN6-201ENST00000374606 TBC1D21Q8IYX1 336 aa17.02■□□□□ 0.32
PFDN6-201ENST00000374606 TCAIMQ8N3R3 496 aa17.02■□□□□ 0.32
PFDN6-201ENST00000374606 FAM46DQ8NEK8 389 aa17.02■□□□□ 0.32
PFDN6-201ENST00000374606 PPP1R14CQ8TAE6 165 aa17.02■□□□□ 0.32
PFDN6-201ENST00000374606 RAD51AP1Q96B01 352 aa17.02■□□□□ 0.32
PFDN6-201ENST00000374606 CXorf40BQ96DE9 158 aa17.02■□□□□ 0.32
PFDN6-201ENST00000374606 PHF21BQ96EK2 531 aa17.02■□□□□ 0.32
PFDN6-201ENST00000374606 FERD3LQ96RJ6 166 aa17.02■□□□□ 0.32
PFDN6-201ENST00000374606 HGH1Q9BTY7 390 aa17.02■□□□□ 0.32
PFDN6-201ENST00000374606 MVB12BQ9H7P6 319 aa17.02■□□□□ 0.32
PFDN6-201ENST00000374606 WWOXQ9NZC7 414 aa17.02■□□□□ 0.32
PFDN6-201ENST00000374606 NCKIPSDQ9NZQ3 722 aa17.02■□□□□ 0.32
PFDN6-201ENST00000374606 SCHIP1Q9P0W5 487 aaPredicted RBP17.02■□□□□ 0.32
PFDN6-201ENST00000374606 GOLGA4Q13439 2230 aaKnown RBP17.01■□□□□ 0.31
PFDN6-201ENST00000374606 A0A1B0GTQ1 180 aa17.01■□□□□ 0.31
PFDN6-201ENST00000374606 OR5K4A6NMS3 321 aa17.01■□□□□ 0.31
PFDN6-201ENST00000374606 B4DGG1 531 aa17.01■□□□□ 0.31
PFDN6-201ENST00000374606 STX16-NPEPL1H3BU86 382 aa17.01■□□□□ 0.31
PFDN6-201ENST00000374606 MYO1CO00159 1063 aa17.01■□□□□ 0.31
PFDN6-201ENST00000374606 STX16O14662 325 aa17.01■□□□□ 0.31
PFDN6-201ENST00000374606 YKT6O15498 198 aa17.01■□□□□ 0.31
PFDN6-201ENST00000374606 DFNA5O60443 496 aa17.01■□□□□ 0.31
PFDN6-201ENST00000374606 TRIM13O60858 407 aa17.01■□□□□ 0.31
PFDN6-201ENST00000374606 NDUFS1P28331 727 aa17.01■□□□□ 0.31
PFDN6-201ENST00000374606 EPHA8P29322 1005 aaPredicted RBP17.01■□□□□ 0.31
PFDN6-201ENST00000374606 PRKAA2P54646 552 aa17.01■□□□□ 0.31
PFDN6-201ENST00000374606 SETDB1Q15047 1291 aa17.01■□□□□ 0.31
PFDN6-201ENST00000374606 PDK4Q16654 411 aa17.01■□□□□ 0.31
PFDN6-201ENST00000374606 HLA-BQ31612 363 aa17.01■□□□□ 0.31
PFDN6-201ENST00000374606 CCSMST1Q4G0I0 132 aa17.01■□□□□ 0.31
PFDN6-201ENST00000374606 SULT1C3Q6IMI6 304 aa17.01■□□□□ 0.31
PFDN6-201ENST00000374606 TRIM48Q8IWZ4 208 aa17.01■□□□□ 0.31
PFDN6-201ENST00000374606 PHC3Q8NDX5 983 aa17.01■□□□□ 0.31
PFDN6-201ENST00000374606 ZDHHC1Q8WTX9 485 aa17.01■□□□□ 0.31
PFDN6-201ENST00000374606 CCDC138Q96M89 665 aa17.01■□□□□ 0.31
PFDN6-201ENST00000374606 CDC6Q99741 560 aa17.01■□□□□ 0.31
PFDN6-201ENST00000374606 SIRPGQ9P1W8 387 aa17.01■□□□□ 0.31
PFDN6-201ENST00000374606 TDRKHQ9Y2W6 561 aaKnown RBP17.01■□□□□ 0.31
PFDN6-201ENST00000374606 COLEC10Q9Y6Z7 277 aa17.01■□□□□ 0.31
PFDN6-201ENST00000374606 KIR2DS5A0A0G2JLQ3 304 aa17■□□□□ 0.31
PFDN6-201ENST00000374606 A0A0G2JNG1 304 aa17■□□□□ 0.31
PFDN6-201ENST00000374606 KRT87PA6NCN2 255 aa17■□□□□ 0.31
PFDN6-201ENST00000374606 LMO7DNF2Z398 122 aa17■□□□□ 0.31
PFDN6-201ENST00000374606 KIR2DS3K7RE56 304 aa17■□□□□ 0.31
PFDN6-201ENST00000374606 KDM1AO60341 852 aa17■□□□□ 0.31
PFDN6-201ENST00000374606 H2AFYO75367 372 aaKnown RBP17■□□□□ 0.31
PFDN6-201ENST00000374606 FGF3P11487 239 aaPredicted RBP17■□□□□ 0.31
PFDN6-201ENST00000374606 BGNP21810 368 aa17■□□□□ 0.31
PFDN6-201ENST00000374606 HNMTP50135 292 aa17■□□□□ 0.31
PFDN6-201ENST00000374606 CCT8P50990 548 aa17■□□□□ 0.31
PFDN6-201ENST00000374606 DNAJB13P59910 316 aa17■□□□□ 0.31
PFDN6-201ENST00000374606 PRKG2Q13237 762 aa17■□□□□ 0.31
PFDN6-201ENST00000374606 KIR2DS5Q14953 304 aa17■□□□□ 0.31
PFDN6-201ENST00000374606 CHI3L2Q15782 390 aa17■□□□□ 0.31
PFDN6-201ENST00000374606 IYDQ6PHW0 289 aa17■□□□□ 0.31
PFDN6-201ENST00000374606 RAB42Q8N4Z0 105 aa17■□□□□ 0.31
PFDN6-201ENST00000374606 OR9A1PQ8NGU1 263 aa17■□□□□ 0.31
PFDN6-201ENST00000374606 BAHD1Q8TBE0 780 aaPredicted RBP17■□□□□ 0.31
PFDN6-201ENST00000374606 RAB3IL1Q8TBN0 382 aa17■□□□□ 0.31
PFDN6-201ENST00000374606 LRRC8CQ8TDW0 803 aa17■□□□□ 0.31
PFDN6-201ENST00000374606 CKAP2Q8WWK9 683 aa17■□□□□ 0.31
PFDN6-201ENST00000374606 ATL1Q8WXF7 558 aa17■□□□□ 0.31
PFDN6-201ENST00000374606 RHBDF1Q96CC6 855 aa17■□□□□ 0.31
PFDN6-201ENST00000374606 FBXL8Q96CD0 374 aa17■□□□□ 0.31
PFDN6-201ENST00000374606 MAGEB18Q96M61 343 aa17■□□□□ 0.31
PFDN6-201ENST00000374606 TMEM237Q96Q45 408 aa17■□□□□ 0.31
PFDN6-201ENST00000374606 PKP4Q99569 1192 aa17■□□□□ 0.31
PFDN6-201ENST00000374606 GAREM1Q9H706 876 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms