RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 ZYG11AQ6WRX3 759 aa20.01■□□□□ 0.79
SYNC-201ENST00000373484 DSELQ8IZU8 1212 aa20.01■□□□□ 0.79
SYNC-201ENST00000373484 LMX1AQ8TE12 382 aa20.01■□□□□ 0.79
SYNC-201ENST00000373484 CLPBQ9H078 707 aa20.01■□□□□ 0.79
SYNC-201ENST00000373484 RBM38Q9H0Z9 239 aaKnown RBP20.01■□□□□ 0.79
SYNC-201ENST00000373484 NMRAL1Q9HBL8 299 aa20.01■□□□□ 0.79
SYNC-201ENST00000373484 MRM3Q9HC36 420 aaKnown RBP20.01■□□□□ 0.79
SYNC-201ENST00000373484 UTP6Q9NYH9 597 aaKnown RBP20.01■□□□□ 0.79
SYNC-201ENST00000373484 SLC2A6Q9UGQ3 507 aa20.01■□□□□ 0.79
SYNC-201ENST00000373484 SPTBN4Q9H254 2564 aa20■□□□□ 0.79
SYNC-201ENST00000373484 SCAMP1O15126 338 aa20■□□□□ 0.79
SYNC-201ENST00000373484 GIMD1P0DJR0 217 aa20■□□□□ 0.79
SYNC-201ENST00000373484 CTSEP14091 401 aa20■□□□□ 0.79
SYNC-201ENST00000373484 PMLP29590 882 aa20■□□□□ 0.79
SYNC-201ENST00000373484 ERFP50548 548 aa20■□□□□ 0.79
SYNC-201ENST00000373484 RPL14P50914 215 aaKnown RBP20■□□□□ 0.79
SYNC-201ENST00000373484 NR1H2P55055 460 aa20■□□□□ 0.79
SYNC-201ENST00000373484 C1orf61Q13536 156 aa20■□□□□ 0.79
SYNC-201ENST00000373484 APOFQ13790 326 aa20■□□□□ 0.79
SYNC-201ENST00000373484 ZNF648Q5T619 568 aaPredicted RBP20■□□□□ 0.79
SYNC-201ENST00000373484 IRAK1BP1Q5VVH5 260 aa20■□□□□ 0.79
SYNC-201ENST00000373484 SNX20Q7Z614 316 aa20■□□□□ 0.79
SYNC-201ENST00000373484 FSTL5Q8N475 847 aaPredicted RBP20■□□□□ 0.79
SYNC-201ENST00000373484 DDHD1Q8NEL9 900 aa20■□□□□ 0.79
SYNC-201ENST00000373484 SETD7Q8WTS6 366 aaKnown RBP20■□□□□ 0.79
SYNC-201ENST00000373484 KIFC1Q9BW19 673 aa20■□□□□ 0.79
SYNC-201ENST00000373484 TMEM168Q9H0V1 697 aa20■□□□□ 0.79
SYNC-201ENST00000373484 OR2AG1Q9H205 316 aa20■□□□□ 0.79
SYNC-201ENST00000373484 RMI1Q9H9A7 625 aa20■□□□□ 0.79
SYNC-201ENST00000373484 PCOLCE2Q9UKZ9 415 aa20■□□□□ 0.79
SYNC-201ENST00000373484 SLC30A1Q9Y6M5 507 aa20■□□□□ 0.79
SYNC-201ENST00000373484 PIKFYVEQ9Y2I7 2098 aa20■□□□□ 0.79
SYNC-201ENST00000373484 A0A096LPK6 155 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 NEMP2A6NFY4 417 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 GPR89AB7ZAQ6 455 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 CBFA2T3O75081 653 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 GPR89BP0CG08 455 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 ITGALP20701 1170 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 CSRP1P21291 193 aaKnown RBP19.99■□□□□ 0.79
SYNC-201ENST00000373484 ME2P23368 584 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 GNPDA1P46926 289 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 ELOCQ15369 112 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 GPR33Q49SQ1 333 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 LDLRAP1Q5SW96 308 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 GPRC6AQ5T6X5 926 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 LIPMQ5VYY2 423 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 STRA8Q7Z7C7 330 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 BAHD1Q8TBE0 780 aaPredicted RBP19.99■□□□□ 0.79
SYNC-201ENST00000373484 RHBDD1Q8TEB9 315 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 CAMK1GQ96NX5 476 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 GATA5Q9BWX5 397 aaPredicted RBP19.99■□□□□ 0.79
SYNC-201ENST00000373484 EFCAB1Q9HAE3 211 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 TREX1Q9NSU2 369 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 TRNAU1APQ9NX07 287 aaKnown RBP19.99■□□□□ 0.79
SYNC-201ENST00000373484 PCYT1BQ9Y5K3 369 aaPredicted RBP19.99■□□□□ 0.79
SYNC-201ENST00000373484 TRBV5-4A0A0C4DH59 114 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 E9PBE3 544 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 VEGFDO43915 354 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 NUAK1O60285 661 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 KLHL41O60662 606 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 MTX2O75431 263 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 CELA2BP08218 269 aaPredicted RBP19.99■□□□□ 0.79
SYNC-201ENST00000373484 ERVK-10P10266 1014 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 ZNF8P17098 575 aaPredicted RBP19.99■□□□□ 0.79
SYNC-201ENST00000373484 SERPINB5P36952 375 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 NUDT2P50583 147 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.99■□□□□ 0.79
SYNC-201ENST00000373484 PYCR3Q53H96 274 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 KLC3Q6P597 504 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 SDR16C5Q8N3Y7 309 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 EID2Q8N6I1 236 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 TRPC4APQ8TEL6 797 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 ULK4Q96C45 1275 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 NLGN3Q9NZ94 848 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 SLC17A6Q9P2U8 582 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 CRLS1Q9UJA2 301 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 AP4B1Q9Y6B7 739 aa19.99■□□□□ 0.79
SYNC-201ENST00000373484 CCDC162PA2VCL2 907 aa19.98■□□□□ 0.79
SYNC-201ENST00000373484 LMO7DNF2Z398 122 aa19.98■□□□□ 0.79
SYNC-201ENST00000373484 SORBS2O94875 1100 aaKnown RBP19.98■□□□□ 0.79
SYNC-201ENST00000373484 FAM58BPP0C7Q3 252 aa19.98■□□□□ 0.79
SYNC-201ENST00000373484 CACNG1Q06432 222 aa19.98■□□□□ 0.79
SYNC-201ENST00000373484 TMEM115Q12893 351 aaPredicted RBP19.98■□□□□ 0.79
SYNC-201ENST00000373484 NAPRTQ6XQN6 538 aa19.98■□□□□ 0.79
SYNC-201ENST00000373484 SNX32Q86XE0 403 aa19.98■□□□□ 0.79
SYNC-201ENST00000373484 GALNT13Q8IUC8 556 aa19.98■□□□□ 0.79
SYNC-201ENST00000373484 DEFB124Q8NES8 71 aa19.98■□□□□ 0.79
SYNC-201ENST00000373484 OR4C6Q8NH72 309 aa19.98■□□□□ 0.79
SYNC-201ENST00000373484 MAPK15Q8TD08 544 aa19.98■□□□□ 0.79
SYNC-201ENST00000373484 HDAC10Q969S8 669 aa19.98■□□□□ 0.79
SYNC-201ENST00000373484 PPP1R14BQ96C90 147 aa19.98■□□□□ 0.79
SYNC-201ENST00000373484 OR2M4Q96R27 311 aa19.98■□□□□ 0.79
SYNC-201ENST00000373484 GOLGA4Q13439 2230 aaKnown RBP19.98■□□□□ 0.79
SYNC-201ENST00000373484 ZCWPW2A0A1B0GU75 182 aa19.97■□□□□ 0.79
SYNC-201ENST00000373484 A0A1B0GVG6 124 aa19.97■□□□□ 0.79
SYNC-201ENST00000373484 FFAR2O15552 330 aa19.97■□□□□ 0.79
SYNC-201ENST00000373484 C2P06681 752 aa19.97■□□□□ 0.79
SYNC-201ENST00000373484 NMBRP28336 390 aa19.97■□□□□ 0.79
SYNC-201ENST00000373484 PUM1Q14671 1186 aaKnown RBP eCLIP19.97■□□□□ 0.79
SYNC-201ENST00000373484 TCEA2Q15560 299 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms