RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 ASMTP46597 345 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 CRADDP78560 199 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 PCDH1Q08174 1060 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 TOMM20Q15388 145 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 ZNF674Q2M3X9 581 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 GHDCQ8N2G8 530 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 EFCAB3Q8N7B9 438 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 OR2T34Q8NGX1 318 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 OR2T3Q8NH03 318 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 C7orf43Q8WVR3 580 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 ITPKCQ96DU7 683 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 CLPTM1LQ96KA5 538 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 KCTD15Q96SI1 283 aaPredicted RBP13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 PBDC1Q9BVG4 233 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 IL22Q9GZX6 179 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 PHPT1Q9NRX4 125 aaPredicted RBP13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 MDFIC2A0A1B0GVS7 189 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 DCLK1O15075 740 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 SERPINB7O75635 380 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 SCGB1D2O95969 90 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 PORP16435 677 aaPredicted RBP13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 NCS1P62166 190 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 FADDQ13158 208 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 ADAM15Q13444 863 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 TPRG1LQ5T0D9 272 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 RFWD3Q6PCD5 774 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 LCLAT1Q6UWP7 414 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 ZNF767PQ75MW2 155 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 DSELQ8IZU8 1212 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 ZNF248Q8NDW4 579 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 BADQ92934 168 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 ZMYM5Q9UJ78 669 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 C4BP0C0L5 1744 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 ATP6V1G2-DDX39BF2Z307 99 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 OR2B3O76000 313 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 PET100P0DJ07 73 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 MTHFD1P11586 935 aaKnown RBP13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 FMO1Q01740 532 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 SMIM15Q7Z3B0 74 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 KLHL15Q96M94 604 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 ARHGAP39Q9C0H5 1083 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 LHX5Q9H2C1 402 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 DPEP3Q9H4B8 488 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 PHF24Q9UPV7 400 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 TNPO3Q9Y5L0 923 aaKnown RBP13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 CBY3A6NI87 242 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 TP73O15350 636 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 C4BPAP04003 597 aaKnown RBP13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 GDI1P31150 447 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 ERVK-8P63133 956 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 DPPA2Q7Z7J5 298 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 ZFP28Q8NHY6 868 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 IPCEF1Q8WWN9 437 aaPredicted RBP13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 PEX13Q92968 403 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 TESCQ96BS2 214 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 SAMD11Q96NU1 681 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 RNF157Q96PX1 679 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 B3GNT5Q9BYG0 378 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 ELAC1Q9H777 363 aaKnown RBP13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 STXBP5LQ9Y2K9 1186 aa13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 ZFP37Q9Y6Q3 630 aaPredicted RBP13.79□□□□□ -0.2
RAPGEF1-202ENST00000372190 TM7SF2O76062 418 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 FARS2O95363 451 aaKnown RBP13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 MAGEB1P43366 347 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 CDH11P55287 796 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 PPP3R1P63098 170 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 ZBED5Q49AG3 693 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 ASB18Q6ZVZ8 466 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 GALNT5Q7Z7M9 940 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 PHYKPLQ8IUZ5 450 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 TSTD1Q8NFU3 115 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 WNT7AO00755 349 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 ITGAVP06756 1048 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 GNSP15586 552 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 PPIBP23284 216 aaKnown RBP13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 PLK1P53350 603 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 PARP15Q460N3 678 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 CRTC2Q53ET0 693 aaPredicted RBP13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 CYP4X1Q8N118 509 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 PXYLP1Q8TE99 480 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 ZNF607Q96SK3 696 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 ANXA2P2A6NMY6 339 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 SLC34A2O95436 690 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 PCCBP05166 539 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 ANXA2P07355 339 aaKnown RBP13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 JUNDP17535 347 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 SERPINF1P36955 418 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 QPCTQ16769 361 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 LRRC38Q5VT99 294 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 PRELID2Q8N945 189 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 PPP3R2Q96LZ3 170 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 OR14A2Q96R54 314 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 MCCC1Q96RQ3 725 aaPredicted RBP13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 ARMC1Q9NVT9 282 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 PDP1Q9P0J1 537 aaPredicted RBP13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 A0A1W2PRU2 124 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 LCHNA4D1U4 455 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 BCAS1O75363 584 aaPredicted RBP13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 SNAI1O95863 264 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms