RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 DMPKQ09013 629 aa17.02■□□□□ 0.32
SSBP3-203ENST00000371319 CHIT1Q13231 466 aa17.02■□□□□ 0.32
SSBP3-203ENST00000371319 LRP8Q14114 963 aa17.02■□□□□ 0.32
SSBP3-203ENST00000371319 CPSF6Q16630 551 aaKnown RBP eCLIP17.02■□□□□ 0.32
SSBP3-203ENST00000371319 AP5B1Q2VPB7 878 aa17.02■□□□□ 0.32
SSBP3-203ENST00000371319 SGO1Q5FBB7 561 aa17.02■□□□□ 0.32
SSBP3-203ENST00000371319 Q6ZS52 159 aa17.02■□□□□ 0.32
SSBP3-203ENST00000371319 NET1Q7Z628 596 aaPredicted RBP17.02■□□□□ 0.32
SSBP3-203ENST00000371319 TRIM69Q86WT6 500 aa17.02■□□□□ 0.32
SSBP3-203ENST00000371319 PGAM4Q8N0Y7 254 aa17.02■□□□□ 0.32
SSBP3-203ENST00000371319 ZNF687Q8N1G0 1237 aa17.02■□□□□ 0.32
SSBP3-203ENST00000371319 FNDC5Q8NAU1 212 aa17.02■□□□□ 0.32
SSBP3-203ENST00000371319 ZNF480Q8WV37 535 aa17.02■□□□□ 0.32
SSBP3-203ENST00000371319 MED8Q96G25 268 aa17.02■□□□□ 0.32
SSBP3-203ENST00000371319 PPP3R2Q96LZ3 170 aa17.02■□□□□ 0.32
SSBP3-203ENST00000371319 SLC52A3Q9NQ40 469 aa17.02■□□□□ 0.32
SSBP3-203ENST00000371319 SPTBN5Q9NRC6 3674 aaKnown RBP17.02■□□□□ 0.32
SSBP3-203ENST00000371319 C10orf142B7Z368 130 aa17.02■□□□□ 0.31
SSBP3-203ENST00000371319 NR5A2O00482 541 aa17.02■□□□□ 0.31
SSBP3-203ENST00000371319 MAN2B1O00754 1011 aa17.02■□□□□ 0.31
SSBP3-203ENST00000371319 PDYNP01213 254 aa17.02■□□□□ 0.31
SSBP3-203ENST00000371319 KRT6AP02538 564 aa17.02■□□□□ 0.31
SSBP3-203ENST00000371319 KRT6BP04259 564 aa17.02■□□□□ 0.31
SSBP3-203ENST00000371319 JUPP14923 745 aa17.02■□□□□ 0.31
SSBP3-203ENST00000371319 CD22P20273 847 aa17.02■□□□□ 0.31
SSBP3-203ENST00000371319 HALP42357 657 aa17.02■□□□□ 0.31
SSBP3-203ENST00000371319 KRT6CP48668 564 aa17.02■□□□□ 0.31
SSBP3-203ENST00000371319 HMGCS1Q01581 520 aa17.02■□□□□ 0.31
SSBP3-203ENST00000371319 ART3Q13508 389 aa17.02■□□□□ 0.31
SSBP3-203ENST00000371319 RPS6KA2Q15349 733 aa17.02■□□□□ 0.31
SSBP3-203ENST00000371319 ZRSR2Q15696 482 aaKnown RBP17.02■□□□□ 0.31
SSBP3-203ENST00000371319 SMU1Q2TAY7 513 aa17.02■□□□□ 0.31
SSBP3-203ENST00000371319 LIPJQ5W064 366 aa17.02■□□□□ 0.31
SSBP3-203ENST00000371319 PTCRAQ6ISU1 281 aaPredicted RBP17.02■□□□□ 0.31
SSBP3-203ENST00000371319 LRRC56Q8IYG6 542 aaPredicted RBP17.02■□□□□ 0.31
SSBP3-203ENST00000371319 EFCAB3Q8N7B9 438 aa17.02■□□□□ 0.31
SSBP3-203ENST00000371319 MAGEB10Q96LZ2 347 aaPredicted RBP17.02■□□□□ 0.31
SSBP3-203ENST00000371319 UHRF1Q96T88 793 aaPredicted RBP17.02■□□□□ 0.31
SSBP3-203ENST00000371319 MYOCQ99972 504 aa17.02■□□□□ 0.31
SSBP3-203ENST00000371319 MRPL1Q9BYD6 325 aaKnown RBP17.02■□□□□ 0.31
SSBP3-203ENST00000371319 RMI1Q9H9A7 625 aa17.02■□□□□ 0.31
SSBP3-203ENST00000371319 EBF1Q9UH73 591 aa17.02■□□□□ 0.31
SSBP3-203ENST00000371319 SNX6Q9UNH7 406 aa17.02■□□□□ 0.31
SSBP3-203ENST00000371319 SERTM1A2A2V5 107 aa17.01■□□□□ 0.31
SSBP3-203ENST00000371319 KLHL33A6NCF5 533 aa17.01■□□□□ 0.31
SSBP3-203ENST00000371319 E7EQ34 232 aa17.01■□□□□ 0.31
SSBP3-203ENST00000371319 NRP2O60462 931 aa17.01■□□□□ 0.31
SSBP3-203ENST00000371319 UGDHO60701 494 aa17.01■□□□□ 0.31
SSBP3-203ENST00000371319 ENTPD5O75356 428 aa17.01■□□□□ 0.31
SSBP3-203ENST00000371319 CIB2O75838 187 aa17.01■□□□□ 0.31
SSBP3-203ENST00000371319 PDE5AO76074 875 aa17.01■□□□□ 0.31
SSBP3-203ENST00000371319 SORBS2O94875 1100 aaKnown RBP17.01■□□□□ 0.31
SSBP3-203ENST00000371319 HOXC4P09017 264 aaPredicted RBP17.01■□□□□ 0.31
SSBP3-203ENST00000371319 CHRNB1P11230 501 aa17.01■□□□□ 0.31
SSBP3-203ENST00000371319 DPP6P42658 865 aa17.01■□□□□ 0.31
SSBP3-203ENST00000371319 UFM1P61960 85 aa17.01■□□□□ 0.31
SSBP3-203ENST00000371319 TFF2Q03403 129 aa17.01■□□□□ 0.31
SSBP3-203ENST00000371319 RFTN2Q52LD8 501 aaPredicted RBP17.01■□□□□ 0.31
SSBP3-203ENST00000371319 TMEM31Q5JXX7 168 aa17.01■□□□□ 0.31
SSBP3-203ENST00000371319 Q7L0L9 218 aa17.01■□□□□ 0.31
SSBP3-203ENST00000371319 RGL4Q8IZJ4 473 aa17.01■□□□□ 0.31
SSBP3-203ENST00000371319 FBXW8Q8N3Y1 598 aa17.01■□□□□ 0.31
SSBP3-203ENST00000371319 OR5AR1Q8NGP9 310 aa17.01■□□□□ 0.31
SSBP3-203ENST00000371319 OR2T34Q8NGX1 318 aa17.01■□□□□ 0.31
SSBP3-203ENST00000371319 HMGB4Q8WW32 186 aa17.01■□□□□ 0.31
SSBP3-203ENST00000371319 MTFMTQ96DP5 389 aaKnown RBP17.01■□□□□ 0.31
SSBP3-203ENST00000371319 SCARF2Q96GP6 870 aaPredicted RBP17.01■□□□□ 0.31
SSBP3-203ENST00000371319 TEX37Q96LM6 180 aa17.01■□□□□ 0.31
SSBP3-203ENST00000371319 TIMM29Q9BSF4 260 aa17.01■□□□□ 0.31
SSBP3-203ENST00000371319 SGPP1Q9BX95 441 aa17.01■□□□□ 0.31
SSBP3-203ENST00000371319 ACPTQ9BZG2 426 aa17.01■□□□□ 0.31
SSBP3-203ENST00000371319 WDR41Q9HAD4 459 aa17.01■□□□□ 0.31
SSBP3-203ENST00000371319 NDE1Q9NXR1 346 aa17.01■□□□□ 0.31
SSBP3-203ENST00000371319 ZIM2Q9NZV7 527 aa17.01■□□□□ 0.31
SSBP3-203ENST00000371319 USP36Q9P275 1121 aaKnown RBP17.01■□□□□ 0.31
SSBP3-203ENST00000371319 PRPF19Q9UMS4 504 aaKnown RBP17.01■□□□□ 0.31
SSBP3-203ENST00000371319 DUSP12Q9UNI6 340 aa17.01■□□□□ 0.31
SSBP3-203ENST00000371319 PSMD13Q9UNM6 376 aa17.01■□□□□ 0.31
SSBP3-203ENST00000371319 POLR3HQ9Y535 204 aaPredicted RBP17.01■□□□□ 0.31
SSBP3-203ENST00000371319 UNC80Q8N2C7 3258 aa17.01■□□□□ 0.31
SSBP3-203ENST00000371319 TRIOBPQ9H2D6 2365 aa17■□□□□ 0.31
SSBP3-203ENST00000371319 PRR19A6NJB7 356 aa17■□□□□ 0.31
SSBP3-203ENST00000371319 BBIP1A8MTZ0 92 aa17■□□□□ 0.31
SSBP3-203ENST00000371319 C9JVG2 144 aa17■□□□□ 0.31
SSBP3-203ENST00000371319 CACNB4O00305 520 aaPredicted RBP17■□□□□ 0.31
SSBP3-203ENST00000371319 MRASO14807 208 aa17■□□□□ 0.31
SSBP3-203ENST00000371319 ACP5P13686 325 aa17■□□□□ 0.31
SSBP3-203ENST00000371319 CAPN3P20807 821 aa17■□□□□ 0.31
SSBP3-203ENST00000371319 MTTPP55157 894 aa17■□□□□ 0.31
SSBP3-203ENST00000371319 KIAA1024LP59773 190 aa17■□□□□ 0.31
SSBP3-203ENST00000371319 TBPL1P62380 186 aa17■□□□□ 0.31
SSBP3-203ENST00000371319 IRF8Q02556 426 aa17■□□□□ 0.31
SSBP3-203ENST00000371319 DOC2AQ14183 400 aa17■□□□□ 0.31
SSBP3-203ENST00000371319 PYCR3Q53H96 274 aa17■□□□□ 0.31
SSBP3-203ENST00000371319 XKR6Q5GH73 641 aa17■□□□□ 0.31
SSBP3-203ENST00000371319 BLOC1S3Q6QNY0 202 aa17■□□□□ 0.31
SSBP3-203ENST00000371319 HACD2Q6Y1H2 254 aa17■□□□□ 0.31
SSBP3-203ENST00000371319 RIPOR1Q6ZS17 1223 aa17■□□□□ 0.31
SSBP3-203ENST00000371319 RETREG3Q86VR2 466 aa17■□□□□ 0.31
SSBP3-203ENST00000371319 LMNTD1Q8N9Z9 388 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms