RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 HBQ1P09105 142 aa12.65□□□□□ -0.38
RPF1-201ENST00000370654 AOAHP28039 575 aa12.65□□□□□ -0.38
RPF1-201ENST00000370654 RPL22P35268 128 aaKnown RBP12.65□□□□□ -0.38
RPF1-201ENST00000370654 YBX1P67809 324 aaKnown RBP12.65□□□□□ -0.38
RPF1-201ENST00000370654 KIR2DS3Q14952 304 aa12.65□□□□□ -0.38
RPF1-201ENST00000370654 NKAIN1Q4KMZ8 207 aa12.65□□□□□ -0.38
RPF1-201ENST00000370654 DCAF10Q5QP82 559 aa12.65□□□□□ -0.38
RPF1-201ENST00000370654 FHL5Q5TD97 284 aa12.65□□□□□ -0.38
RPF1-201ENST00000370654 COX15Q7KZN9 410 aa12.65□□□□□ -0.38
RPF1-201ENST00000370654 RAB43Q86YS6 212 aa12.65□□□□□ -0.38
RPF1-201ENST00000370654 MCATQ8IVS2 390 aaKnown RBP12.65□□□□□ -0.38
RPF1-201ENST00000370654 N4BP2L2Q92802 583 aaPredicted RBP12.65□□□□□ -0.38
RPF1-201ENST00000370654 PNPLA2Q96AD5 504 aa12.65□□□□□ -0.38
RPF1-201ENST00000370654 SNRNP40Q96DI7 357 aaKnown RBP12.65□□□□□ -0.38
RPF1-201ENST00000370654 SGSM3Q96HU1 749 aa12.65□□□□□ -0.38
RPF1-201ENST00000370654 DHRS4Q9BTZ2 278 aa12.65□□□□□ -0.38
RPF1-201ENST00000370654 PLCL2Q9UPR0 1127 aa12.65□□□□□ -0.38
RPF1-201ENST00000370654 ZNF148Q9UQR1 794 aa12.65□□□□□ -0.38
RPF1-201ENST00000370654 PCDHGB7Q9Y5F8 929 aa12.65□□□□□ -0.38
RPF1-201ENST00000370654 CSAG2Q9Y5P2 127 aa12.65□□□□□ -0.38
RPF1-201ENST00000370654 AP1M2Q9Y6Q5 423 aa12.65□□□□□ -0.38
RPF1-201ENST00000370654 ESPL1Q14674 2120 aa12.65□□□□□ -0.39
RPF1-201ENST00000370654 SPTAN1Q13813 2472 aaKnown RBP12.64□□□□□ -0.39
RPF1-201ENST00000370654 ANKRD12Q6UB98 2062 aa12.64□□□□□ -0.39
RPF1-201ENST00000370654 ERI2A8K979 691 aaKnown RBP12.64□□□□□ -0.39
RPF1-201ENST00000370654 QSOX1O00391 747 aa12.64□□□□□ -0.39
RPF1-201ENST00000370654 PRICKLE3O43900 615 aaPredicted RBP12.64□□□□□ -0.39
RPF1-201ENST00000370654 ZNF189O75820 626 aaPredicted RBP12.64□□□□□ -0.39
RPF1-201ENST00000370654 CD9P21926 228 aa12.64□□□□□ -0.39
RPF1-201ENST00000370654 PSMB5P28074 263 aa12.64□□□□□ -0.39
RPF1-201ENST00000370654 NMBRP28336 390 aa12.64□□□□□ -0.39
RPF1-201ENST00000370654 STIP1P31948 543 aaKnown RBP12.64□□□□□ -0.39
RPF1-201ENST00000370654 FDFT1P37268 417 aa12.64□□□□□ -0.39
RPF1-201ENST00000370654 FOLR3P41439 243 aa12.64□□□□□ -0.39
RPF1-201ENST00000370654 BDKRB1P46663 353 aa12.64□□□□□ -0.39
RPF1-201ENST00000370654 RAB28P51157 221 aa12.64□□□□□ -0.39
RPF1-201ENST00000370654 RRADP55042 308 aa12.64□□□□□ -0.39
RPF1-201ENST00000370654 SESN2P58004 480 aaPredicted RBP12.64□□□□□ -0.39
RPF1-201ENST00000370654 FASTKD1Q53R41 847 aaKnown RBP12.64□□□□□ -0.39
RPF1-201ENST00000370654 DNAJC21Q5F1R6 531 aaKnown RBP12.64□□□□□ -0.39
RPF1-201ENST00000370654 SHISA6Q6ZSJ9 500 aa12.64□□□□□ -0.39
RPF1-201ENST00000370654 TTLL10Q6ZVT0 673 aa12.64□□□□□ -0.39
RPF1-201ENST00000370654 GALNT16Q8N428 558 aa12.64□□□□□ -0.39
RPF1-201ENST00000370654 CISD2Q8N5K1 135 aaKnown RBP12.64□□□□□ -0.39
RPF1-201ENST00000370654 METTL27Q8N6F8 245 aaPredicted RBP12.64□□□□□ -0.39
RPF1-201ENST00000370654 OR2Y1Q8NGV0 311 aa12.64□□□□□ -0.39
RPF1-201ENST00000370654 PROKR1Q8TCW9 393 aa12.64□□□□□ -0.39
RPF1-201ENST00000370654 CARD6Q9BX69 1037 aa12.64□□□□□ -0.39
RPF1-201ENST00000370654 P2RY12Q9H244 342 aa12.64□□□□□ -0.39
RPF1-201ENST00000370654 SLAMF7Q9NQ25 335 aa12.64□□□□□ -0.39
RPF1-201ENST00000370654 ASF1BQ9NVP2 202 aa12.64□□□□□ -0.39
RPF1-201ENST00000370654 IRAK4Q9NWZ3 460 aa12.64□□□□□ -0.39
RPF1-201ENST00000370654 STOX2Q9P2F5 926 aaPredicted RBP12.64□□□□□ -0.39
RPF1-201ENST00000370654 MAP10Q9P2G4 905 aa12.64□□□□□ -0.39
RPF1-201ENST00000370654 PLEKHB1Q9UF11 243 aaPredicted RBP12.64□□□□□ -0.39
RPF1-201ENST00000370654 GPN3Q9UHW5 284 aaPredicted RBP12.64□□□□□ -0.39
RPF1-201ENST00000370654 RIMKLBQ9ULI2 386 aa12.64□□□□□ -0.39
RPF1-201ENST00000370654 NTNG1Q9Y2I2 539 aa12.64□□□□□ -0.39
RPF1-201ENST00000370654 PADI2Q9Y2J8 665 aa12.64□□□□□ -0.39
RPF1-201ENST00000370654 A1L4Q6 167 aa12.63□□□□□ -0.39
RPF1-201ENST00000370654 CTSVO60911 334 aa12.63□□□□□ -0.39
RPF1-201ENST00000370654 SLCO2B1O94956 709 aa12.63□□□□□ -0.39
RPF1-201ENST00000370654 APRTP07741 180 aa12.63□□□□□ -0.39
RPF1-201ENST00000370654 F7P08709 466 aaPredicted RBP12.63□□□□□ -0.39
RPF1-201ENST00000370654 ALAS2P22557 587 aa12.63□□□□□ -0.39
RPF1-201ENST00000370654 ARNTP27540 789 aa12.63□□□□□ -0.39
RPF1-201ENST00000370654 C4orf17Q53FE4 359 aa12.63□□□□□ -0.39
RPF1-201ENST00000370654 CRB2Q5IJ48 1285 aa12.63□□□□□ -0.39
RPF1-201ENST00000370654 CTSL3PQ5NE16 218 aa12.63□□□□□ -0.39
RPF1-201ENST00000370654 VWA5B1Q5TIE3 1220 aa12.63□□□□□ -0.39
RPF1-201ENST00000370654 LYPLAL1Q5VWZ2 237 aa12.63□□□□□ -0.39
RPF1-201ENST00000370654 TLDC1Q6P9B6 456 aa12.63□□□□□ -0.39
RPF1-201ENST00000370654 FIGLAQ6QHK4 219 aa12.63□□□□□ -0.39
RPF1-201ENST00000370654 CES3Q6UWW8 571 aa12.63□□□□□ -0.39
RPF1-201ENST00000370654 AMER2Q8N7J2 671 aa12.63□□□□□ -0.39
RPF1-201ENST00000370654 OR2L8Q8NGY9 312 aa12.63□□□□□ -0.39
RPF1-201ENST00000370654 DENND1AQ8TEH3 1009 aa12.63□□□□□ -0.39
RPF1-201ENST00000370654 PTERQ96BW5 349 aa12.63□□□□□ -0.39
RPF1-201ENST00000370654 NDC1Q9BTX1 674 aa12.63□□□□□ -0.39
RPF1-201ENST00000370654 SYNPO2LQ9H987 977 aa12.63□□□□□ -0.39
RPF1-201ENST00000370654 TREX1Q9NSU2 369 aa12.63□□□□□ -0.39
RPF1-201ENST00000370654 GALPQ9UBC7 116 aa12.63□□□□□ -0.39
RPF1-201ENST00000370654 NDOR1Q9UHB4 597 aa12.63□□□□□ -0.39
RPF1-201ENST00000370654 TSR3Q9UJK0 312 aaKnown RBP12.63□□□□□ -0.39
RPF1-201ENST00000370654 GUCA1BQ9UMX6 200 aa12.63□□□□□ -0.39
RPF1-201ENST00000370654 TCRBV7S3A2A0A539 114 aa12.62□□□□□ -0.39
RPF1-201ENST00000370654 E7EVH7 732 aa12.62□□□□□ -0.39
RPF1-201ENST00000370654 SOCS6O14544 535 aa12.62□□□□□ -0.39
RPF1-201ENST00000370654 RASGRF2O14827 1237 aa12.62□□□□□ -0.39
RPF1-201ENST00000370654 OR1D4P47884 311 aa12.62□□□□□ -0.39
RPF1-201ENST00000370654 PRAMEP78395 509 aa12.62□□□□□ -0.39
RPF1-201ENST00000370654 PLOD1Q02809 727 aaPredicted RBP12.62□□□□□ -0.39
RPF1-201ENST00000370654 MYBPC3Q14896 1274 aa12.62□□□□□ -0.39
RPF1-201ENST00000370654 NR6A1Q15406 480 aa12.62□□□□□ -0.39
RPF1-201ENST00000370654 SEL1L2Q5TEA6 688 aa12.62□□□□□ -0.39
RPF1-201ENST00000370654 FRMPD2BQ6IN97 320 aa12.62□□□□□ -0.39
RPF1-201ENST00000370654 DCUN1D3Q8IWE4 304 aa12.62□□□□□ -0.39
RPF1-201ENST00000370654 PRR7Q8TB68 274 aa12.62□□□□□ -0.39
RPF1-201ENST00000370654 SSC4DQ8WTU2 575 aa12.62□□□□□ -0.39
RPF1-201ENST00000370654 SPSB2Q99619 263 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms