RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 WNT6Q9Y6F9 365 aa19.25■□□□□ 0.67
LMO4-202ENST00000370544 A0A0G2JN53 185 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 TAF4O00268 1085 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 PRAMEF11O60813 436 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 TRMUO75648 421 aaKnown RBP19.24■□□□□ 0.67
LMO4-202ENST00000370544 TGFB1P01137 390 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 MTHFD1P11586 935 aaKnown RBP19.24■□□□□ 0.67
LMO4-202ENST00000370544 SYN1P17600 705 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 IL18Q14116 193 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 RNF220Q5VTB9 566 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 SLC30A6Q6NXT4 461 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 MCEMP1Q8IX19 187 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 PRSS58Q8IYP2 241 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 GPR151Q8TDV0 419 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 IPCEF1Q8WWN9 437 aaPredicted RBP19.24■□□□□ 0.67
LMO4-202ENST00000370544 NARS2Q96I59 477 aaKnown RBP19.24■□□□□ 0.67
LMO4-202ENST00000370544 KCNN2Q9H2S1 579 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 DHRS7Q9Y394 339 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 SLC30A4O14863 429 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 CNTN5O94779 1100 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 TGFBR2P37173 567 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 EEFSECP57772 596 aaKnown RBP19.24■□□□□ 0.67
LMO4-202ENST00000370544 FOXM1Q08050 763 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 LRRC66Q68CR7 880 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 ZNF433Q8N7K0 673 aaPredicted RBP19.24■□□□□ 0.67
LMO4-202ENST00000370544 TRPV3Q8NET8 790 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 SLC35C2Q9NQQ7 365 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 CLDND1Q9NY35 253 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 KCTD3Q9Y597 815 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 HCN1O60741 890 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 NDUFS1P28331 727 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 MPIP34949 423 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 BDKRB1P46663 353 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 CCNHP51946 323 aaPredicted RBP19.24■□□□□ 0.67
LMO4-202ENST00000370544 SERINC3Q13530 473 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 SPIN4Q56A73 249 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 SWT1Q5T5J6 900 aaKnown RBP19.24■□□□□ 0.67
LMO4-202ENST00000370544 C22orf39Q6P5X5 142 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 PCDHAC1Q9H158 963 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 SNX7Q9UNH6 387 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 SOD2P04179 222 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 MNDAP41218 407 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 ALKBH2Q6NS38 261 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 FAM110BQ8TC76 370 aa19.24■□□□□ 0.67
LMO4-202ENST00000370544 CDC7O00311 574 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 CASP9P55211 416 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 FRG2Q64ET8 278 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 TPRG1Q6ZUI0 275 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 FRG2BQ96QU4 278 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 OR52B2Q96RD2 323 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 MRM3Q9HC36 420 aaKnown RBP19.23■□□□□ 0.67
LMO4-202ENST00000370544 ZDHHC2Q9UIJ5 367 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 ING4Q9UNL4 249 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 SLC22A14Q9Y267 594 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 MAN2B2Q9Y2E5 1009 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 ARHGEF33A8MVX0 844 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 TMEM233B4DJY2 109 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 INPPL1O15357 1258 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 FGF18O76093 207 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 TYRP14679 529 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 ZNF8P17098 575 aaPredicted RBP19.23■□□□□ 0.67
LMO4-202ENST00000370544 GATMP50440 423 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 ABHD13Q7L211 337 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 DCAF4L2Q8NA75 395 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 PMEPA1Q969W9 287 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 RGMAQ96B86 450 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 TEPSINQ96N21 525 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 WBP11Q9Y2W2 641 aaKnown RBP19.23■□□□□ 0.67
LMO4-202ENST00000370544 FAUP35544 74 aaKnown RBP19.23■□□□□ 0.67
LMO4-202ENST00000370544 SUZ12Q15022 739 aaKnown RBP19.23■□□□□ 0.67
LMO4-202ENST00000370544 FRRS1Q6ZNA5 592 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 P2RY8Q86VZ1 359 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 LRRC58Q96CX6 371 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 SIPA1Q96FS4 1042 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 GPER1Q99527 375 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 PPM1HQ9ULR3 514 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 ALOX5P09917 674 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 DNAJB1P25685 340 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 CLCN4P51793 760 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 LIN52Q52LA3 116 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 C16orf70Q9BSU1 422 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 SLC29A3Q9BZD2 475 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 EBF3Q9H4W6 596 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 ANKHQ9HCJ1 492 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 ZIM2Q9NZV7 527 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 SIRPGQ9P1W8 387 aa19.23■□□□□ 0.67
LMO4-202ENST00000370544 CDH1P12830 882 aa19.22■□□□□ 0.67
LMO4-202ENST00000370544 IL18R1Q13478 541 aa19.22■□□□□ 0.67
LMO4-202ENST00000370544 GOLGA7Q7Z5G4 137 aa19.22■□□□□ 0.67
LMO4-202ENST00000370544 OR4C6Q8NH72 309 aa19.22■□□□□ 0.67
LMO4-202ENST00000370544 BPIFB1Q8TDL5 484 aa19.22■□□□□ 0.67
LMO4-202ENST00000370544 RNF31Q96EP0 1072 aa19.22■□□□□ 0.67
LMO4-202ENST00000370544 ARFGEF2Q9Y6D5 1785 aa19.22■□□□□ 0.67
LMO4-202ENST00000370544 PSIP1O75475 530 aaKnown RBP19.22■□□□□ 0.67
LMO4-202ENST00000370544 UPP1Q16831 310 aa19.22■□□□□ 0.67
LMO4-202ENST00000370544 RNASE12Q5GAN4 147 aaKnown RBP19.22■□□□□ 0.67
LMO4-202ENST00000370544 SMARCD3Q6STE5 483 aa19.22■□□□□ 0.67
LMO4-202ENST00000370544 CDH24Q86UP0 819 aa19.22■□□□□ 0.67
LMO4-202ENST00000370544 THOC6Q86W42 341 aaKnown RBP19.22■□□□□ 0.67
LMO4-202ENST00000370544 OVCA2Q8WZ82 227 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms