RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 TLR4O00206 839 aa15.6■□□□□ 0.09
COL17A1-202ENST00000369733 ENPP3O14638 875 aa15.6■□□□□ 0.09
COL17A1-202ENST00000369733 MID1O15344 667 aa15.6■□□□□ 0.09
COL17A1-202ENST00000369733 MNDAP41218 407 aa15.6■□□□□ 0.09
COL17A1-202ENST00000369733 MYBPC1Q00872 1141 aa15.6■□□□□ 0.09
COL17A1-202ENST00000369733 HSPB3Q12988 150 aa15.6■□□□□ 0.09
COL17A1-202ENST00000369733 TAF13Q15543 124 aa15.6■□□□□ 0.09
COL17A1-202ENST00000369733 KIAA1614Q5VZ46 1190 aa15.6■□□□□ 0.09
COL17A1-202ENST00000369733 SUSD6Q92537 303 aa15.6■□□□□ 0.09
COL17A1-202ENST00000369733 MTERF1Q99551 399 aaKnown RBP15.6■□□□□ 0.09
COL17A1-202ENST00000369733 DSN1Q9H410 356 aa15.6■□□□□ 0.09
COL17A1-202ENST00000369733 FCF1Q9Y324 198 aaKnown RBP15.6■□□□□ 0.09
COL17A1-202ENST00000369733 OR2AG2A6NM03 316 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 PPEF2O14830 753 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 SORBS2O94875 1100 aaKnown RBP15.59■□□□□ 0.09
COL17A1-202ENST00000369733 SLC35G4P0C7Q5 338 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 FUT4P22083 530 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 MAPK12P53778 367 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 RGS8P57771 180 aaPredicted RBP15.59■□□□□ 0.09
COL17A1-202ENST00000369733 LAPTM4AQ15012 233 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 NANOGP8Q6NSW7 305 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 ZFP3Q96NJ6 502 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 CHIAQ9BZP6 476 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 NANOGQ9H9S0 305 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 CD84Q9UIB8 345 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 KCPQ6ZWJ8 1503 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 GGT5P36269 586 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 HLCSP50747 726 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 PCDH1Q08174 1060 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 USP41Q3LFD5 358 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 C6orf141Q5SZD1 244 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 CILP2Q8IUL8 1156 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 OR4F6Q8NGB9 312 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 KCTD13Q8WZ19 329 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 TMEM203Q969S6 136 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 STX16O14662 325 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 SLC6A4P31645 630 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 XKP51811 444 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 MAZP56270 477 aaKnown RBP15.59■□□□□ 0.09
COL17A1-202ENST00000369733 KCNAB2Q13303 367 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 CBX2Q14781 532 aaPredicted RBP15.59■□□□□ 0.09
COL17A1-202ENST00000369733 ADNP2Q6IQ32 1131 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 MSANTD2Q6P1R3 559 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 FIBCD1Q8N539 461 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 TNFAIP8L1Q8WVP5 186 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 HERC2P3Q9BVR0 1158 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 MEAF6Q9HAF1 191 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 C12orf4Q9NQ89 552 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 THUMPD1Q9NXG2 353 aaKnown RBP15.59■□□□□ 0.09
COL17A1-202ENST00000369733 C9IYK1 514 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 OR10H2O60403 315 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 GJA9P57773 515 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 RGS1Q08116 209 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 GJD3Q8N144 294 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 MINDY3Q9H8M7 445 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 CDC14AQ9UNH5 594 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 OR10H1Q9Y4A9 318 aa15.59■□□□□ 0.09
COL17A1-202ENST00000369733 A0A1B0GVM2 712 aa15.58■□□□□ 0.09
COL17A1-202ENST00000369733 ARL5CA6NH57 179 aa15.58■□□□□ 0.09
COL17A1-202ENST00000369733 MAP2K4P45985 399 aa15.58■□□□□ 0.09
COL17A1-202ENST00000369733 DIO3P55073 304 aa15.58■□□□□ 0.09
COL17A1-202ENST00000369733 SP2Q02086 613 aa15.58■□□□□ 0.09
COL17A1-202ENST00000369733 CNIH3Q8TBE1 160 aa15.58■□□□□ 0.09
COL17A1-202ENST00000369733 TNKS2Q9H2K2 1166 aa15.58■□□□□ 0.09
COL17A1-202ENST00000369733 TM9SF3Q9HD45 589 aa15.58■□□□□ 0.09
COL17A1-202ENST00000369733 GTF2IRD1Q9UHL9 959 aa15.58■□□□□ 0.09
COL17A1-202ENST00000369733 A8MV72 311 aaPredicted RBP15.58■□□□□ 0.08
COL17A1-202ENST00000369733 PQBP1O60828 265 aaKnown RBP15.58■□□□□ 0.08
COL17A1-202ENST00000369733 OPN1SWP03999 348 aa15.58■□□□□ 0.08
COL17A1-202ENST00000369733 CHRM1P11229 460 aaPredicted RBP15.58■□□□□ 0.08
COL17A1-202ENST00000369733 ZNF45Q02386 682 aa15.58■□□□□ 0.08
COL17A1-202ENST00000369733 ASB18Q6ZVZ8 466 aa15.58■□□□□ 0.08
COL17A1-202ENST00000369733 GOLGA7Q7Z5G4 137 aa15.58■□□□□ 0.08
COL17A1-202ENST00000369733 TMEM199Q8N511 208 aa15.58■□□□□ 0.08
COL17A1-202ENST00000369733 WDTC1Q8N5D0 677 aa15.58■□□□□ 0.08
COL17A1-202ENST00000369733 KAT2AQ92830 837 aa15.58■□□□□ 0.08
COL17A1-202ENST00000369733 C1QTNF1Q9BXJ1 281 aa15.58■□□□□ 0.08
COL17A1-202ENST00000369733 DERL2Q9GZP9 239 aa15.58■□□□□ 0.08
COL17A1-202ENST00000369733 MRM3Q9HC36 420 aaKnown RBP15.58■□□□□ 0.08
COL17A1-202ENST00000369733 FLRT1Q9NZU1 646 aa15.58■□□□□ 0.08
COL17A1-202ENST00000369733 SIX4Q9UIU6 781 aa15.58■□□□□ 0.08
COL17A1-202ENST00000369733 PCDHGA11Q9Y5H2 935 aa15.58■□□□□ 0.08
COL17A1-202ENST00000369733 MYH7BA7E2Y1 1941 aa15.58■□□□□ 0.08
COL17A1-202ENST00000369733 RIIAD1A6NNX1 92 aa15.58■□□□□ 0.08
COL17A1-202ENST00000369733 PRLP01236 227 aa15.58■□□□□ 0.08
COL17A1-202ENST00000369733 IFNA7P01567 189 aa15.58■□□□□ 0.08
COL17A1-202ENST00000369733 DHRS4L1P0CG22 281 aa15.58■□□□□ 0.08
COL17A1-202ENST00000369733 HNMTP50135 292 aa15.58■□□□□ 0.08
COL17A1-202ENST00000369733 RPS3AP61247 264 aaKnown RBP15.58■□□□□ 0.08
COL17A1-202ENST00000369733 PLA2G4EQ3MJ16 856 aa15.58■□□□□ 0.08
COL17A1-202ENST00000369733 SLC25A24Q6NUK1 477 aa15.58■□□□□ 0.08
COL17A1-202ENST00000369733 SCML4Q8N228 414 aa15.58■□□□□ 0.08
COL17A1-202ENST00000369733 HSH2DQ96JZ2 352 aa15.58■□□□□ 0.08
COL17A1-202ENST00000369733 SLC35C2Q9NQQ7 365 aa15.58■□□□□ 0.08
COL17A1-202ENST00000369733 ACADMP11310 421 aa15.58■□□□□ 0.08
COL17A1-202ENST00000369733 NSG1P42857 185 aa15.58■□□□□ 0.08
COL17A1-202ENST00000369733 AP1S1P61966 158 aa15.58■□□□□ 0.08
COL17A1-202ENST00000369733 EMX2Q04743 252 aa15.58■□□□□ 0.08
COL17A1-202ENST00000369733 COLGALT2Q8IYK4 626 aa15.58■□□□□ 0.08
COL17A1-202ENST00000369733 SNX33Q8WV41 574 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms