RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 GPRC6AQ5T6X5 926 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 GALNT18Q6P9A2 607 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 DOK6Q6PKX4 331 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 ZBTB49Q6ZSB9 765 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 FAM124AQ86V42 546 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 FLCNQ8NFG4 579 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 HMGCLL1Q8TB92 370 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 RMND5BQ96G75 393 aaPredicted RBP10.41□□□□□ -0.74
TPM3-212ENST00000368533 TRMT61BQ9BVS5 477 aaKnown RBP10.41□□□□□ -0.74
TPM3-212ENST00000368533 TTYH1Q9H313 450 aaPredicted RBP10.41□□□□□ -0.74
TPM3-212ENST00000368533 PIF1Q9H611 641 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 EIF2B4Q9UI10 523 aaKnown RBP10.41□□□□□ -0.74
TPM3-212ENST00000368533 MYRFQ9Y2G1 1151 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 DMDP11532 3685 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 TRPM6Q9BX84 2022 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 PRSS51A0A1B0GVH4 220 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 TSPAN12O95859 305 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 CLCN7P51798 805 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 HERVK_113P63132 956 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 ADAM15Q13444 863 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 LRP8Q14114 963 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 FRA10AC1Q70Z53 315 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 RTL10Q7L3V2 364 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 VRK3Q8IV63 474 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 CHERPQ8IWX8 916 aaKnown RBP10.41□□□□□ -0.74
TPM3-212ENST00000368533 CADM3Q8N126 398 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 FBXO39Q8N4B4 442 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 TWIST2Q8WVJ9 160 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 LRCH3Q96II8 777 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 COPS8Q99627 209 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 ERVK-6Q9BXR3 956 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 SLC2A11Q9BYW1 496 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 FAM83DQ9H4H8 585 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 PRM3Q9NNZ6 103 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 HEBP1Q9NRV9 189 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 DZANK1Q9NVP4 752 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 SERGEFQ9UGK8 458 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 FBXO10Q9UK96 956 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 V9GYQ6 96 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 FAM149AA5PLN7 773 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 H3BMQ9 156 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 H3BNH8 94 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 PSMD11O00231 422 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 AZIN1O14977 448 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 GSSP48637 474 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 CSNK1DP48730 415 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 ARPC4P59998 168 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 POLR2LP62875 67 aaKnown RBP10.4□□□□□ -0.74
TPM3-212ENST00000368533 GRB7Q14451 532 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 PDGFRLQ15198 375 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 PHKG1Q16816 387 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 RGS21Q2M5E4 152 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 FAM209AQ5JX71 171 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 KIAA1211LQ6NV74 962 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 NIPAL1Q6NVV3 410 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 TICAM1Q8IUC6 712 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 ZC3H7AQ8IWR0 971 aaKnown RBP10.4□□□□□ -0.74
TPM3-212ENST00000368533 RBFAQ8N0V3 343 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 FAM110BQ8TC76 370 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 CANT1Q8WVQ1 401 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 PEX13Q92968 403 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 COG8Q96MW5 612 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 ZNF641Q96N77 438 aaPredicted RBP10.4□□□□□ -0.74
TPM3-212ENST00000368533 EGFL8Q99944 293 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 CPEB1Q9BZB8 566 aaKnown RBP10.4□□□□□ -0.74
TPM3-212ENST00000368533 P2RY12Q9H244 342 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 CD93Q9NPY3 652 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 GIN1Q9NXP7 522 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 LIMD1Q9UGP4 676 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 DAPK2Q9UIK4 370 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 DNAJC15Q9Y5T4 150 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 RNF103-CHMP3A0A140T963 221 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 PFDN6O15212 129 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 CDK14O94921 469 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 ZNF12P17014 697 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 ZNF26P17031 533 aaPredicted RBP10.4□□□□□ -0.74
TPM3-212ENST00000368533 S100A1P23297 94 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 MAT2AP31153 395 aaKnown RBP10.4□□□□□ -0.74
TPM3-212ENST00000368533 YAP1P46937 504 aaKnown RBP10.4□□□□□ -0.74
TPM3-212ENST00000368533 PREPP48147 710 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 HSPA13P48723 471 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 ACADVLP49748 655 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 MLLT10P55197 1068 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 RHDQ02161 417 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 PMS2P3Q13401 168 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 DNASE1L3Q13609 305 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 SLC14A2Q15849 920 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 HNRNPA1L2Q32P51 320 aaKnown RBP10.4□□□□□ -0.74
TPM3-212ENST00000368533 TIGD2Q4W5G0 525 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.4□□□□□ -0.74
TPM3-212ENST00000368533 CHSY3Q70JA7 882 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 METTL3Q86U44 580 aaKnown RBP10.4□□□□□ -0.74
TPM3-212ENST00000368533 SPPL2CQ8IUH8 684 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 MIER2Q8N344 545 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 CPA6Q8N4T0 437 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 AP2M1Q96CW1 435 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 ATOH8Q96SQ7 321 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 TRMOQ9BU70 441 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 RPF2Q9H7B2 306 aaKnown RBP10.4□□□□□ -0.74
TPM3-212ENST00000368533 CXorf21Q9HAI6 301 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms