RNA–Protein interactions for RNA: ENST00000368498.6

GOPC-202, Transcript of golgi associated PDZ and coiled-coil motif containing, humanhuman

TSL 1 (best) BASIC

Gene GOPC, Length 4,450 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOPC-202ENST00000368498 CCDC115Q96NT0 180 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 ELL3Q9HB65 397 aaPredicted RBP13.15□□□□□ -0.3
GOPC-202ENST00000368498 WDR6Q9NNW5 1121 aaKnown RBP13.15□□□□□ -0.3
GOPC-202ENST00000368498 C12orf71A8MTZ7 269 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 SMAD9O15198 467 aaKnown RBP13.15□□□□□ -0.3
GOPC-202ENST00000368498 RHOQP17081 205 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 RPL3P39023 403 aaKnown RBP13.15□□□□□ -0.3
GOPC-202ENST00000368498 PITX1P78337 314 aaPredicted RBP13.15□□□□□ -0.3
GOPC-202ENST00000368498 TXNL4AP83876 142 aaKnown RBP13.15□□□□□ -0.3
GOPC-202ENST00000368498 CTC1Q2NKJ3 1217 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 RAET1GQ6H3X3 334 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 RNF180Q86T96 592 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 IGFN1Q86VF2 1251 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 TMEM126BQ8IUX1 230 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 ZC3H3Q8IXZ2 948 aaKnown RBP13.15□□□□□ -0.3
GOPC-202ENST00000368498 CDKN2AIPNLQ96HQ2 116 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 DUSP26Q9BV47 211 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 LHPPQ9H008 270 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 TAS2R7Q9NYW3 318 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 RHCGQ9UBD6 479 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 AXIN1O15169 862 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 DFNA5O60443 496 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 CH25HO95992 272 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 CHRNA1P02708 482 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 DNTTP04053 509 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 PRPS2P11908 318 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 CKMT1AP12532 417 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 HOXB6P17509 224 aaKnown RBP13.15□□□□□ -0.3
GOPC-202ENST00000368498 SLC6A4P31645 630 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 OR4D2P58180 307 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 ZMYND11Q15326 602 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 LRRC73Q5JTD7 316 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 ERMAPQ96PL5 475 aaPredicted RBP13.15□□□□□ -0.3
GOPC-202ENST00000368498 CDK5RAP1Q96SZ6 601 aaKnown RBP13.15□□□□□ -0.3
GOPC-202ENST00000368498 TFB2MQ9H5Q4 396 aaKnown RBP13.15□□□□□ -0.3
GOPC-202ENST00000368498 GPN1Q9HCN4 374 aaPredicted RBP13.15□□□□□ -0.3
GOPC-202ENST00000368498 DNAJC27Q9NZQ0 273 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 GIT1Q9Y2X7 761 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 TRPV2Q9Y5S1 764 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 H3BM21 787 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 CKBP12277 381 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 PBX3P40426 434 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 ELAVL2Q12926 359 aaKnown RBP13.15□□□□□ -0.3
GOPC-202ENST00000368498 SEMA3AQ14563 771 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 CCDC157Q569K6 752 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 CRB2Q5IJ48 1285 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 DCDC5Q6ZRR9 648 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 FAM220AQ7Z4H9 259 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 MARCH9Q86YJ5 346 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 AKAP1Q92667 903 aaKnown RBP eCLIP13.15□□□□□ -0.3
GOPC-202ENST00000368498 SLC38A4Q969I6 547 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 UBE2E3Q969T4 207 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 PTPN18Q99952 460 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 NAA50Q9GZZ1 169 aaKnown RBP13.15□□□□□ -0.3
GOPC-202ENST00000368498 MMP27Q9H306 513 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 KCTD5Q9NXV2 234 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 ERVK-11Q9UQG0 969 aa13.15□□□□□ -0.3
GOPC-202ENST00000368498 A0A0G2JN53 185 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 ISM1B1AKI9 464 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 OR1E2P47887 323 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 RGS8P57771 180 aaPredicted RBP13.14□□□□□ -0.31
GOPC-202ENST00000368498 ST3GAL4Q11206 333 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 SLC10A2Q12908 348 aaPredicted RBP13.14□□□□□ -0.31
GOPC-202ENST00000368498 TOR1AIP1Q5JTV8 583 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 HMBOX1Q6NT76 420 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 CYP4V2Q6ZWL3 525 aaPredicted RBP13.14□□□□□ -0.31
GOPC-202ENST00000368498 OR4F6Q8NGB9 312 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 SLC9A6Q92581 669 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 UFD1Q92890 307 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 MYO19Q96H55 970 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 TMED9Q9BVK6 235 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 FAIM2Q9BWQ8 316 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 ASPNQ9BXN1 380 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 IL1RAPQ9NPH3 570 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 PCDHB1Q9Y5F3 818 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 J3KR12 359 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 OR2B3O76000 313 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 CDK14O94921 469 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 CD72P21854 359 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 ARHGAP15Q53QZ3 475 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 LINGO2Q7L985 606 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 WDTC1Q8N5D0 677 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 GTF3C2Q8WUA4 911 aaPredicted RBP13.14□□□□□ -0.31
GOPC-202ENST00000368498 ZUFSPQ96AP4 578 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 SPG21Q9NZD8 308 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 FBXO9Q9UK97 447 aaPredicted RBP13.14□□□□□ -0.31
GOPC-202ENST00000368498 MYH13Q9UKX3 1938 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 FAM86C2PA6NEL3 165 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 ATE1O95260 518 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 VIPP01282 170 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 IFNA7P01567 189 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 RFC2P35250 354 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 HTR2BP41595 481 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 GPR1P46091 355 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 TREML2Q5T2D2 321 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 GALNT10Q86SR1 603 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 STX12Q86Y82 276 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 TP53INP2Q8IXH6 220 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 ZMIZ2Q8NF64 920 aa13.14□□□□□ -0.31
GOPC-202ENST00000368498 PYURFQ96I23 114 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms