RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 MATN2O00339 956 aa14.58□□□□□ -0.08
SMPDL3A-201ENST00000368440 MAP2K7O14733 419 aa14.58□□□□□ -0.08
SMPDL3A-201ENST00000368440 PRAMEF10O60809 474 aa14.58□□□□□ -0.08
SMPDL3A-201ENST00000368440 CATP04040 527 aaKnown RBP14.58□□□□□ -0.08
SMPDL3A-201ENST00000368440 ST6GAL1P15907 406 aa14.58□□□□□ -0.08
SMPDL3A-201ENST00000368440 NELFEP18615 380 aaKnown RBP14.58□□□□□ -0.08
SMPDL3A-201ENST00000368440 CDH3P22223 829 aa14.58□□□□□ -0.08
SMPDL3A-201ENST00000368440 SLC5A2P31639 672 aa14.58□□□□□ -0.08
SMPDL3A-201ENST00000368440 SPESP1Q6UW49 350 aa14.58□□□□□ -0.08
SMPDL3A-201ENST00000368440 CLEC14AQ86T13 490 aa14.58□□□□□ -0.08
SMPDL3A-201ENST00000368440 EIF1ADQ8N9N8 165 aaKnown RBP14.58□□□□□ -0.08
SMPDL3A-201ENST00000368440 OR2L8Q8NGY9 312 aa14.58□□□□□ -0.08
SMPDL3A-201ENST00000368440 UBLCP1Q8WVY7 318 aaPredicted RBP14.58□□□□□ -0.08
SMPDL3A-201ENST00000368440 RNF31Q96EP0 1072 aa14.58□□□□□ -0.08
SMPDL3A-201ENST00000368440 SLC41A2Q96JW4 573 aa14.58□□□□□ -0.08
SMPDL3A-201ENST00000368440 PKP4Q99569 1192 aa14.58□□□□□ -0.08
SMPDL3A-201ENST00000368440 TXNDC16Q9P2K2 825 aa14.58□□□□□ -0.08
SMPDL3A-201ENST00000368440 IKZF3Q9UKT9 509 aa14.58□□□□□ -0.08
SMPDL3A-201ENST00000368440 SLC39A10Q9ULF5 831 aa14.58□□□□□ -0.08
SMPDL3A-201ENST00000368440 CELSR3Q9NYQ7 3312 aa14.58□□□□□ -0.08
SMPDL3A-201ENST00000368440 ACACBO00763 2458 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 SLC9B1P1A6NJY1 282 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 ISM1B1AKI9 464 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 B4E171 279 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 MYO1CO00159 1063 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 KDM1AO60341 852 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 ZNF37AP17032 561 aaPredicted RBP14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 TSPAN7P41732 249 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 RGS4P49798 205 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 ERVPABLB-1P60509 514 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 MC2RQ01718 297 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 FASTKQ14296 549 aaKnown RBP14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 ANKS6Q68DC2 871 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 UBE2R2Q712K3 238 aaPredicted RBP14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 MYO1HQ8N1T3 1032 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 OR9A1PQ8NGU1 263 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 UHMK1Q8TAS1 419 aaKnown RBP14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 ZNF578Q96N58 590 aaPredicted RBP14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 GPR22Q99680 433 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 PITPNM3Q9BZ71 974 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 ACSS3Q9H6R3 686 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 THSD1Q9NS62 852 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 SLC39A1Q9NY26 324 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 RAXQ9Y2V3 346 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 B3GALT1Q9Y5Z6 326 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 MAP1BP46821 2468 aaKnown RBP14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 EBLN1P0CF75 366 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 FOLR1P15328 257 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 PSMB5P28074 263 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 PHBP35232 272 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 GMPRP36959 345 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 MLLT3P42568 568 aaPredicted RBP14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 IL2P60568 153 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 NAB1Q13506 487 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 GRTP1Q5TC63 336 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 MTERF4Q7Z6M4 381 aaKnown RBP14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 MAGEC3Q8TD91 643 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 ANKRD49Q8WVL7 239 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 TRAPPC9Q96Q05 1148 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 TAAR9Q96RI9 348 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 C1GALT1Q9NS00 363 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 SPATA7Q9P0W8 599 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 ZMIZ1Q9ULJ6 1067 aa14.57□□□□□ -0.08
SMPDL3A-201ENST00000368440 ZFHX4Q86UP3 3567 aa14.56□□□□□ -0.08
SMPDL3A-201ENST00000368440 SDK2Q58EX2 2172 aa14.56□□□□□ -0.08
SMPDL3A-201ENST00000368440 PHGDHO43175 533 aaKnown RBP14.56□□□□□ -0.08
SMPDL3A-201ENST00000368440 ATP8B1O43520 1251 aa14.56□□□□□ -0.08
SMPDL3A-201ENST00000368440 PRICKLE3O43900 615 aaPredicted RBP14.56□□□□□ -0.08
SMPDL3A-201ENST00000368440 WISP3O95389 354 aaPredicted RBP14.56□□□□□ -0.08
SMPDL3A-201ENST00000368440 ZBTB11O95625 1053 aaPredicted RBP14.56□□□□□ -0.08
SMPDL3A-201ENST00000368440 SYF2O95926 243 aaKnown RBP14.56□□□□□ -0.08
SMPDL3A-201ENST00000368440 ERGP11308 486 aa14.56□□□□□ -0.08
SMPDL3A-201ENST00000368440 SPRP35270 261 aaPredicted RBP14.56□□□□□ -0.08
SMPDL3A-201ENST00000368440 HSD17B3P37058 310 aa14.56□□□□□ -0.08
SMPDL3A-201ENST00000368440 FOXM1Q08050 763 aa14.56□□□□□ -0.08
SMPDL3A-201ENST00000368440 USP10Q14694 798 aaKnown RBP14.56□□□□□ -0.08
SMPDL3A-201ENST00000368440 PHKG1Q16816 387 aa14.56□□□□□ -0.08
SMPDL3A-201ENST00000368440 LRRC8EQ6NSJ5 796 aa14.56□□□□□ -0.08
SMPDL3A-201ENST00000368440 MBOAT1Q6ZNC8 495 aa14.56□□□□□ -0.08
SMPDL3A-201ENST00000368440 FBXO15Q8NCQ5 510 aaPredicted RBP14.56□□□□□ -0.08
SMPDL3A-201ENST00000368440 PPFIBP2Q8ND30 876 aa14.56□□□□□ -0.08
SMPDL3A-201ENST00000368440 SNIP1Q8TAD8 396 aaKnown RBP14.56□□□□□ -0.08
SMPDL3A-201ENST00000368440 FGF11Q92914 225 aa14.56□□□□□ -0.08
SMPDL3A-201ENST00000368440 OR6C1Q96RD1 312 aa14.56□□□□□ -0.08
SMPDL3A-201ENST00000368440 CYTH2Q99418 400 aa14.56□□□□□ -0.08
SMPDL3A-201ENST00000368440 RAB11FIP5Q9BXF6 653 aa14.56□□□□□ -0.08
SMPDL3A-201ENST00000368440 SOHLH2Q9NX45 425 aa14.56□□□□□ -0.08
SMPDL3A-201ENST00000368440 PDE10AQ9Y233 779 aa14.56□□□□□ -0.08
SMPDL3A-201ENST00000368440 PCDHGA7Q9Y5G6 932 aa14.56□□□□□ -0.08
SMPDL3A-201ENST00000368440 A0A1W2PPV9 198 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 NVLO15381 856 aaKnown RBP14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 ZBTB14O43829 449 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 SLC16A8O95907 504 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 HSD11B2P80365 405 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 POU4F1Q01851 419 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 BMPR2Q13873 1038 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 KIR2DS3Q14952 304 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 SLMAPQ14BN4 828 aa14.55□□□□□ -0.08
SMPDL3A-201ENST00000368440 UAP1Q16222 522 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms