RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 CLOCKO15516 846 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 LIASO43766 372 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 SHOX2O60902 331 aaPredicted RBP6.94□□□□□ -1.3
SPTA1-201ENST00000368147 TULP3O75386 442 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 RECQL5O94762 991 aaPredicted RBP6.94□□□□□ -1.3
SPTA1-201ENST00000368147 CLCNKAP51800 687 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 PRKAA2P54646 552 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 MSLNQ13421 630 aaPredicted RBP6.94□□□□□ -1.3
SPTA1-201ENST00000368147 VPS26BQ4G0F5 336 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 SULT1C3Q6IMI6 304 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 CMC1Q7Z7K0 106 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 SDR16C5Q8N3Y7 309 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 AZIN2Q96A70 460 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 TUBGCP5Q96RT8 1024 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 DUSP9Q99956 384 aaKnown RBP6.94□□□□□ -1.3
SPTA1-201ENST00000368147 DCUN1D5Q9BTE7 237 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 TM9SF3Q9HD45 589 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 C11orf16Q9NQ32 467 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 DGKBQ9Y6T7 804 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 SLC35F4A4IF30 521 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 C2orf74A8MZ97 194 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 LYPLA1O75608 230 aaPredicted RBP6.94□□□□□ -1.3
SPTA1-201ENST00000368147 SERPINB7O75635 380 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 WFS1O76024 890 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 ROR2Q01974 943 aaKnown RBP6.94□□□□□ -1.3
SPTA1-201ENST00000368147 SMARCB1Q12824 385 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 LARS2Q15031 903 aaKnown RBP6.94□□□□□ -1.3
SPTA1-201ENST00000368147 GPR68Q15743 365 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 MED27Q6P2C8 311 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 IZUMO2Q6UXV1 221 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 FAM83HQ6ZRV2 1179 aaPredicted RBP6.94□□□□□ -1.3
SPTA1-201ENST00000368147 ZNF761Q86XN6 746 aaPredicted RBP6.94□□□□□ -1.3
SPTA1-201ENST00000368147 XYLT1Q86Y38 959 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 CLVS1Q8IUQ0 354 aaPredicted RBP6.94□□□□□ -1.3
SPTA1-201ENST00000368147 KATNAL2Q8IYT4 538 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 CMTM8Q8IZV2 173 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 CBY1Q9Y3M2 126 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 CCNKO75909 580 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 TGM6O95932 706 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 CCNE2O96020 404 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 FGF1P05230 155 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 CD2P06729 351 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 RBMS1P29558 406 aaKnown RBP6.94□□□□□ -1.3
SPTA1-201ENST00000368147 SPOCK1Q08629 439 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 BRMS1LQ5PSV4 323 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 ZCCHC12Q6PEW1 402 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 SPATC1Q76KD6 591 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 C12orf56Q8IXR9 622 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 VCPIP1Q96JH7 1222 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 CDK15Q96Q40 435 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 TMEM27Q9HBJ8 222 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 SLC40A1Q9NP59 571 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 IFT46Q9NQC8 304 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 ABCB10Q9NRK6 738 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 KCNU1A8MYU2 1149 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 ANGPTL1O95841 491 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 CD48P09326 243 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 POU2F1P14859 743 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 NCK1P16333 377 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 BDKRB1P46663 353 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 MED22Q15528 200 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 TOR1AIP1Q5JTV8 583 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 BORAQ6PGQ7 559 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 C19orf35Q6ZS72 473 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 ELOA2Q8IYF1 753 aaPredicted RBP6.94□□□□□ -1.3
SPTA1-201ENST00000368147 ZBTB8BQ8NAP8 495 aaPredicted RBP6.94□□□□□ -1.3
SPTA1-201ENST00000368147 DOK4Q8TEW6 326 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 ESAMQ96AP7 390 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 UHRF1Q96T88 793 aaPredicted RBP6.94□□□□□ -1.3
SPTA1-201ENST00000368147 ALG2Q9H553 416 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 SLC39A1Q9NY26 324 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 MED1Q15648 1581 aaPredicted RBP6.93□□□□□ -1.3
SPTA1-201ENST00000368147 TMEM150CB9EJG8 249 aa6.93□□□□□ -1.3
SPTA1-201ENST00000368147 DNM1LO00429 736 aa6.93□□□□□ -1.3
SPTA1-201ENST00000368147 UGT1A9O60656 530 aa6.93□□□□□ -1.3
SPTA1-201ENST00000368147 C8orf89P0DMQ9 161 aa6.93□□□□□ -1.3
SPTA1-201ENST00000368147 UGT1A6P19224 532 aa6.93□□□□□ -1.3
SPTA1-201ENST00000368147 UGT1A1P22309 533 aa6.93□□□□□ -1.3
SPTA1-201ENST00000368147 UGT1A4P22310 534 aa6.93□□□□□ -1.3
SPTA1-201ENST00000368147 PAX3P23760 479 aa6.93□□□□□ -1.3
SPTA1-201ENST00000368147 UGT1A3P35503 534 aa6.93□□□□□ -1.3
SPTA1-201ENST00000368147 AP2S1P53680 142 aaPredicted RBP6.93□□□□□ -1.3
SPTA1-201ENST00000368147 WDR45BQ5MNZ6 344 aa6.93□□□□□ -1.3
SPTA1-201ENST00000368147 NUP54Q7Z3B4 507 aa6.93□□□□□ -1.3
SPTA1-201ENST00000368147 TAC4Q86UU9 113 aa6.93□□□□□ -1.3
SPTA1-201ENST00000368147 MPP5Q8N3R9 675 aa6.93□□□□□ -1.3
SPTA1-201ENST00000368147 STOML3Q8TAV4 291 aa6.93□□□□□ -1.3
SPTA1-201ENST00000368147 EPS8L1Q8TE68 723 aa6.93□□□□□ -1.3
SPTA1-201ENST00000368147 COQ8BQ96D53 544 aa6.93□□□□□ -1.3
SPTA1-201ENST00000368147 MMABQ96EY8 250 aaPredicted RBP6.93□□□□□ -1.3
SPTA1-201ENST00000368147 TBL1XR1Q9BZK7 514 aa6.93□□□□□ -1.3
SPTA1-201ENST00000368147 UGT1A7Q9HAW7 530 aa6.93□□□□□ -1.3
SPTA1-201ENST00000368147 UGT1A10Q9HAW8 530 aa6.93□□□□□ -1.3
SPTA1-201ENST00000368147 UGT1A8Q9HAW9 530 aa6.93□□□□□ -1.3
SPTA1-201ENST00000368147 ANKHQ9HCJ1 492 aa6.93□□□□□ -1.3
SPTA1-201ENST00000368147 SNX15Q9NRS6 342 aa6.93□□□□□ -1.3
SPTA1-201ENST00000368147 SAMHD1Q9Y3Z3 626 aaKnown RBP6.93□□□□□ -1.3
SPTA1-201ENST00000368147 PCDHGB5Q9Y5G0 923 aa6.93□□□□□ -1.3
SPTA1-201ENST00000368147 NEMP2A6NFY4 417 aa6.93□□□□□ -1.3
SPTA1-201ENST00000368147 ORC5O43913 435 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms